Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhazya_20stricta_20[genbank_20GCA_5F001752375.1_202016-10-04] 979 sequences; 274,354,041 total letters Query= NC_001623.1 Length=133894 Score E Sequences producing significant alignments: (Bits) Value seq977 89.7 4e-13 >seq977 Length=5547227 Score = 89.7 bits (98), Expect = 4e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 28961 AATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGC 29020 ||||||| | ||| | || || | || ||||| ||||| || ||| ||| | | Sbjct 917074 AATGCAAGTCTTCGTTAAGACCCTTACAGGCAAGACCATCACTCTTGAAGTTGAAAGCTC 917133 Query 29021 AGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCA 29080 ||| || | | | || | || ||||||| || || || || | || |||||| Sbjct 917134 AGATACAATTGACAATGTCAAAGCAAAAATTCAGGACAAGGAGGGGATTCCTCCAGATCA 917193 Query 29081 ACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAA 29140 |||||| | || | |||||| ||||||||||| ||| || | || |||||||| Sbjct 917194 GCAAAGATTGATATCTGCGGGGAAACAACTGGAGGATGGTCGTACCCTTGCTGATTACAA 917253 Query 29141 TATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGGG 29189 ||| |||||||| ||||| |||||| | || || ||| | || || ||| Sbjct 917254 TATCCAGAAGGAGTCTACACTTCACCTTGTTTTGCGACTTCGTGGTGGG 917302 Score = 82.4 bits (90), Expect = 7e-11 Identities = 98/134 (73%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 29055 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAA 29114 || || |||||| | || ||||| |||||| | |||||||| || ||||||||||| Sbjct 916712 GACAAGGAAGGTRTCCCACCTGATCAGCAAAGATTGATCTTTGCCGGGAAACAACTGGAG 916771 Query 29115 GATTCCAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCACATGGTGTTA 29174 ||| | |||| | || || ||||| ||||| ||||| || ||||| || | || || Sbjct 916772 GATGCTCGAACTCTTGCTGACTACAACATTCAAAAGGAGTCCACTCTCCATCTCGTCTTG 916831 Query 29175 CGATTACGAGGAGG 29188 ||| | || || || Sbjct 916832 CGACTTCGGGGTGG 916845 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428330889282245