Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhazya_20stricta_20[genbank_20GCA_5F001752375.1_202016-10-04] 979 sequences; 274,354,041 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq940 152 6e-32 >seq940 Length=8971605 Score = 152 bits (168), Expect = 6e-32 Identities = 399/606 (66%), Gaps = 2/606 (0%) Strand=Plus/Minus Query 33301 AAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTG 33360 || || ||||| || || || |||||||| |||| |||| ||||| || || || Sbjct 8502674 AAGCACGCGAAGTCACAATGGAGACCCTCATCTCGCGAGATTAACTCGTTCGAGAAGGTC 8502615 Query 33361 AGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCA-GAAAA 33419 | ||||||||||| || || || || | ||||||||| | || || ||| || || Sbjct 8502614 AAACCGGGCATTAGCCCGCGTTTCTTTAACCAAAATATCGC-GCAAAAACTCCCCGAGAA 8502556 Query 33420 GAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGTCATG 33479 ||| || || || || ||||||||| | | | ||| || | | | | | | Sbjct 8502555 GAATATCCCCTCGACGCAAGCAAAGGCGACCAAACGCTCCGCAAATGATTCTCCGCCGTC 8502496 Query 33480 TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATT 33539 ||||| | ||||| | ||||||||||| || ||||| || || || || || | Sbjct 8502495 GATCCATCGGAGGGCCCACTTGGCCTTCTTTTCAACGCAAGGTATGGTCTCCATTGCGTG 8502436 Query 33540 AAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACAT 33599 |||||| || || || | || |||| || | |||| ||| || |||||||| Sbjct 8502435 AAAGAGCCTGTGCTTCTCGTCTGGGTCCTTAATYTAGGACTCGAGCAAGAGYCTATACAT 8502376 Query 33600 TTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAAT 33659 || |||||||||||||| ||||| || || || |||||||| | ||||||| | Sbjct 8502375 CTCGGAATGAATGTTTTCGATGGCAATTTGGAAGCCGTAGAAGGCACGYGCCTCGGAGAC 8502316 Query 33660 CTGTACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGC 33719 ||| |||||| | |||||| | || | ||| || || || || || || || Sbjct 8502315 CTGAACTTCTTTCATGAATCGTCCGGCGAGATTCTCCAAAACGATGCCATCTGAGGKGGC 8502256 Query 33720 AAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATC 33779 ||||| |||| || | | ||||| | ||||| || || || || | ||| | Sbjct 8502255 GAAAAATGCCAGAACGCGACTAATAAAGTGACGCTCGTCAGGGGTGAGGTTTTCCCATTG 8502196 Query 33780 ATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTT 33839 | || || | || | || || || || | ||||| || || |||||||| || || Sbjct 8502195 ACGCATGTCCTGGGAGAGGTCGACCTCCTCGGCAGTCCAGAAGGAGGCCTCTGCTTTCTT 8502136 Query 33840 ATACATGTTCCAGATGTCATAATATTGGATTGGGAAAATAACAAATCTATTTGGATTTGG 33899 ||||| | ||| || | | ||||| ||||| || || || | | ||| ||||| Sbjct 8502135 GTACATCTCCCAAATCTGAGGGTATTGAATTGGAAACATGCAGAAGCGGTCTGGGTTTGG 8502076 Query 33900 TGCAAG 33905 ||| || Sbjct 8502075 TGCCAG 8502070 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622939576683640