Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhazya_20stricta_20[genbank_20GCA_5F001752375.1_202016-10-04] 979 sequences; 274,354,041 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq978 100 3e-16 seq977 100 3e-16 >seq978 Length=8767375 Score = 100 bits (110), Expect = 3e-16 Identities = 123/168 (73%), Gaps = 0/168 (0%) Strand=Plus/Minus Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 |||||||||||| | |||||| |||||| || || ||||| || ||||| ||||| Sbjct 3246699 CGACACCATCGACAATGTCAAAGCAAAGATCCAAGATAAGGAAGGAATCCCTCCAGATCA 3246640 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAA 26947 ||||| || || | || ||| || |||||||| || | || | | | ||| || || Sbjct 3246639 GCAAAGGCTGATCTTCGCCGGAAAGCAACTCGAGGACGGCAGGACCCTTGCCGATTACAA 3246580 Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 ||||||||| || || || |||| ||||||| | || |||||||| Sbjct 3246579 CATTCAAAAGGAGTCAACCCTCCACTTGGTCCTCCGTCTGAGAGGAGG 3246532 >seq977 Length=5547227 Score = 100 bits (110), Expect = 3e-16 Identities = 123/169 (73%), Gaps = 0/169 (0%) Strand=Plus/Plus Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 |||||||| || | ||||| ||||||| ||||| ||||| | || || ||||| Sbjct 916679 GACACCATTGATAACGTCAAGGCAAAGATTCAAGACAAGGAAGGTRTCCCACCTGATCAG 916738 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 |||||| | || | | ||| |||||||| || |||| | ||| | ||||| ||| Sbjct 916739 CAAAGATTGATCTTTGCCGGGAAACAACTGGAGGATGCTCGAACTCTTGCTGACTACAAC 916798 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAA 26997 |||||||| || || ||| ||||||| ||| || ||||| | || |||| Sbjct 916799 ATTCAAAAGGAGTCCACTCTCCATCTCGTCTTGCGACTTCGGGGTGGAA 916847 Score = 98.7 bits (108), Expect = 1e-15 Identities = 123/169 (73%), Gaps = 0/169 (0%) Strand=Plus/Plus Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||||||||| | | ||| ||||||| ||||| ||||| || || || ||||| Sbjct 916907 GACACCATCGATAATGCCAAGGCAAAGATTCAAGACAAGGAAGGTATCCCACCTGATCAG 916966 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 |||||| | || | | || |||||||| || |||| | ||| | | ||||| ||| Sbjct 916967 CAAAGATTGATCTTTGCTGGGAAACAACTGGAGGATGGTCGAACCCTTGCTGACTACAAC 917026 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAA 26997 ||||||||||| || || | ||||| ||| || ||||| | || |||| Sbjct 917027 ATTCAAAAAGAGTCCACCTTACATCTTGTCTTGCGACTTCGTGGTGGAA 917075 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | ||||| ||||| |||| || ||| | ||||| |||| | || | Sbjct 1026757 ATGCAGATCTTTGTGAAAACCCTAACCGGTAAAACCATCACTCTCGAGGTCGAGAGTTCC 1026698 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 || |||||||| | ||||| ||||| ||||| || || || ||||||||||| Sbjct 1026697 GATACCATCGATAATGTCAAGGCTAAGATCCAAGACAAGGAGGGCATCCCTCCCGATCAG 1026638 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || | || || | || ||||||||||||||| || | | | | | | ||| |||||| Sbjct 1026637 CAGCGCCTAATCTTCGCCGGCAAACAACTCGAGGACGGTCGGACCCTAGCCGATTATAAC 1026578 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 ||||| || || || || ||||||| || || Sbjct 1026577 ATTCAGAAGGAGTCCACCCTCCATCTCGTTCT 1026546 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478656542368880