Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhazya_20stricta_20[genbank_20GCA_5F001752375.1_202016-10-04] 979 sequences; 274,354,041 total letters Query= NC_008520.2 Length=132239 Score E Sequences producing significant alignments: (Bits) Value seq946 87.8 2e-12 seq977 86.0 5e-12 >seq946 Length=5553863 Score = 87.8 bits (96), Expect = 2e-12 Identities = 91/120 (76%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 111280 GACAAAGAAGGCGTTCCCGTCGATCAACAAAGGCTTATTTATGCGGGCAAACAATTGGAA 111339 || |||||||| |||| ||||| || || || |||| ||| || || ||||||||| Sbjct 333560 GAMAAAGAAGGTATTCCTCCTGATCAGCAGAGACTGATTTTTGCTGGTAAGCAATTGGAA 333501 Query 111340 GATTCTAAAACTATGGCCGATTATAATATACAAAAAGAATCTACACTACATTTAGTGTTG 111399 ||| ||| ||||||| |||||||| ||||||||||| ||||| || || || ||| Sbjct 333500 GATGGCCGTACTTTGGCCGACTATAATATCCAAAAAGAATCAACACTTCACTTGGTTTTG 333441 >seq977 Length=5547227 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246 |||||||||||||||||||| | || || || || |||||| |||| || | Sbjct 1049536 ATGCAAATTTTTGTCAAAACCCTAACTGGTAAGACGATTACCTTGGAGGTCGAGAGCTCG 1049595 Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306 ||| | | | | | || || ||| ||| || || |||||| |||| ||||| Sbjct 1049596 GATACAATAGACAACGTGAAGGCAAAGATTCAGGATAAGGAAGGCATTCCTCCGGATCAG 1049655 Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366 || | || || | ||| || || || |||||||| | ||| |||| ||||| ||| Sbjct 1049656 CAGCGCCTGATCTTTGCTGGGAAGCAGTTGGAAGACGGCAGAACCTTGGCGGATTACAAT 1049715 Query 111367 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413 || || || || ||||| |||||| | || ||| | || || ||||| Sbjct 1049716 ATTCAGAAGGAGTCTACCCTACATCTCGTTTTGAGGCTTCGTGGTGG 1049762 Score = 82.4 bits (90), Expect = 6e-11 Identities = 146/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246 ||||| || ||||| || || |||| || || |||||||| |||| || | | Sbjct 917531 ATGCAGATCTTTGTGAAGACTTTGACTGGGAAGACCATTACTTTGGAGGTTGAGAGCTCC 917590 Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306 || || ||| | | || || || ||| |||||||||||| |||| ||||| Sbjct 917591 GACACTATTGACAATGTCAAGGCCAAGATTCAGGACAAAGAAGGCATTCCTCCTGATCAG 917650 Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366 || | || |||| ||| |||||||| || |||||| | || | || |||||||| Sbjct 917651 CAGCGTCTGATTTTTGCTGGCAAACAGTTTGAAGATGGCAGGACACTTGCAGATTATAAC 917710 Query 111367 ATACAAAAAGAATCTACACTACATTTAGTGTTG 111399 || || || ||||| || |||||| |||||| Sbjct 917711 ATCCACAAGGAATCAACTCTACATCAGGTGTTG 917743 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 423034952471800