Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhazya_20stricta_20[genbank_20GCA_5F001752375.1_202016-10-04] 979 sequences; 274,354,041 total letters Query= NC_008725.1 Length=111953 Score E Sequences producing significant alignments: (Bits) Value seq977 107 1e-18 >seq977 Length=5547227 Score = 107 bits (118), Expect = 1e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 |||||||||||| ||||||| |||| ||||| || ||||| | || || | | Sbjct 1049308 ATGCAAATATTTGTTAAAACTCTAACCGGCAAGACGATTACTCTTGAGGTTGAGGGTTCT 1049367 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || ||| | | | || | ||| |||||| ||||| ||||| | ||| |||| Sbjct 1049368 GACACGATTGACAATGTCAAGGCCAAAATTCAGGATAAGGAGGGGATTCCTCCGGACCAG 1049427 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 |||||||| ||||||||||| || || | || || |||| | |||||||| ||| Sbjct 1049428 CAGAGACTCATCTTTGCTGGGAAGCAGTTGGAGGACGGCCGAACTCTTGCCGATTATAAT 1049487 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATT 22045 ||||| ||||| || ||||||||| |||| || Sbjct 1049488 ATTCAAAAGGAGTCGACTCTTCATCTGGTCTT 1049519 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 ||||| ||||| |||||||||| || || || || ||||| |||| || | || Sbjct 1025845 ATGCAGATATTCGTTAAAACATTGACCGGGAAGACGATTACGCTGGAGGTTGAGAGCTCA 1025786 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | | | | ||| ||| ||| || || ||||| | ||| | || Sbjct 1025785 GATACCATAGACAACGTGAAGGCAAAGATTCAGGACAAGGAGGGAATTCCTCCGGATCAG 1025726 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 ||||| |||||||| ||||| || ||||| |||||| ||| |||| ||||| || Sbjct 1025725 CAGAGGCTTATCTTCGCTGGGAAGCAACTTGAAGATGGCCGTACTCTGGCTGATTATAAC 1025666 Query 22014 ATTCAGAAGGAATCTACTCTTCA 22036 || ||||||||||| |||||||| Sbjct 1025665 ATCCAGAAGGAATCGACTCTTCA 1025643 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 358120527011566