Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhazya_20stricta_20[genbank_20GCA_5F001752375.1_202016-10-04] 979 sequences; 274,354,041 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq940 174 3e-38 >seq940 Length=8971605 Score = 174 bits (192), Expect = 3e-38 Identities = 472/710 (66%), Gaps = 30/710 (4%) Strand=Plus/Plus Query 42309 ATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTGGCCAAGGAC 42368 ||||||||||| || || |||| |||||| ||||||||| | ||||| || ||||| Sbjct 8502130 ATGTACAAGAAAGCAGAGGCCTCCTTCTGGACTGCCGAGGAGGTCGACCTCTCCCAGGAC 8502189 Query 42369 ACGGCCGGC--TGGGAG----TCACTGTCTGA-GAACGAAAAGTTTTTCCTCAAAAACAT 42421 | | || | ||||| |||| |||| || || | || || || | | Sbjct 8502190 ATG--CGTCAATGGGAAAACCTCACCC-CTGACGAGCGTCACTTTATTAGTCG----CGT 8502242 Query 42422 ACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCAT 42481 ||||| || |||||| |||| || ||||| || ||||| || ||| | ||||| Sbjct 8502243 TCTGGCATTTTTCGCCMCCTCAGATGGCATCGTTTTGGAGAATCTCGCCGGACGATTCAT 8502302 Query 42482 GAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGAA 42541 |||||| || ||| || ||||| || ||||||||||||||| || ||||| || || Sbjct 8502303 GAAAGAAGTTCAGGTCTCCGAGGCRCGTGCCTTCTACGGCTTCCAAATTGCCATCGAAAA 8502362 Query 42542 CGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGTCGAGCG 42601 | | || || ||| |||| ||||| | | || || ||| || | |||| Sbjct 8502363 CATTCATTCCGAGATGTATAGRCTCTTGCTCGAGTCCTARATTAAGGACCCAGACGAGAA 8502422 Query 42602 TAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGC 42661 || |||| || | || |||||||| || || ||| | | |||||||| | ||||| Sbjct 8502423 GCACAGGCTCTTTCACGCAATGGAGACCATACCTTGCGTTGAAAAGAAGGCCAAGTGGGC 8502482 Query 42662 GCTCAACTGGATCGAGAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGC 42721 ||| |||||||| | || | | | || | ||| | |||| |||||| | Sbjct 8502483 CCTCCGATGGATCGACGG---CGGAGAATCATTTGCGGAGCGTTTGGTCGCCTTTGCTTG 8502539 Query 42722 CGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGAAGGT 42781 ||||||||| || ||||||||||| || | | || || ||| | ||| | | Sbjct 8502540 CGTCGAGGGGATATTCTTCTCGGGGAGTTTTTGCGCGATATTTTGGTTAAAGAAACGCGG 8502599 Query 42782 GTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAG 42841 | |||||||| | |||||||||||||| | ||| | || ||||| || ||| | Sbjct 8502600 GCTAATGCCCGGTTTGACCTTCTCGAACGAGTTAATCTCGCGAGATGAGGGTCTCCATTG 8502659 Query 42842 GGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTCGA---AGGAGCG 42898 ||||| || ||| | | ||| || | ||| ||| ||| | || |||| || Sbjct 8502660 TGACTTCGCGTGCTTAC---TCTACAGTCTCCTGAGGATGAAG---TTGAGCGAGGACCG 8502713 Query 42899 GGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGC-AGTCGC 42957 || | | ||| | |||| || ||||| || |||| ||| ||| | | || | ||| Sbjct 8502714 AATCAGAGGAATCGTTGCGGATGCAGTGGATATAGAGAGGGAATTCGT-ATGCGACGCGC 8502772 Query 42958 TGCCCGTG-TCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACAT 43006 || ||||| | ||||| ||||||||| ||||| ||| | |||||||| Sbjct 8502773 TG-CCGTGCGCGCTGGTGGGCATGAACGGTGACCTAATGAGTAAGTACAT 8502821 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944327643649040