Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhazya_20stricta_20[genbank_20GCA_5F001752375.1_202016-10-04] 979 sequences; 274,354,041 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq558 91.5 2e-13 >seq558 Length=4929555 Score = 91.5 bits (100), Expect = 2e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 48359 ACCTCCTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATACC 48418 ||||||||| || | ||| | ||||| | || | || || | |||||| |||||||| Sbjct 349845 ACCTCCTTGGTCCACATAACGAGCAGTGTCATTGAATACCCTCAGCATTGGAACAATACC 349786 Query 48419 ATTTGATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATTACTAATTGA 48478 ||| ||| | ||||| ||||| ||||||||||||| | || | || ||| || || Sbjct 349785 ATTGGATGTCCCATTTGTTCCTCTAATATAACTTCCAGTGGCACGAATGTTATGAACAGA 349726 Query 48479 AATACCTATACCACCTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGTATCATAAAT 48538 | ||| || || || || ||| || | ||| || || ||||||||||| || Sbjct 349725 TACACCAATCCCTCCAGCTGATTTGCTGATAACAGCRCATTCCTTGAGGGTATCATATAT 349666 Query 48539 TCCTTCTATACTATCATCTATCAT 48562 || || || || || ||| |||| Sbjct 349665 GCCCTCAATGCTGTCTTCTTTCAT 349642 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562101921193560