Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhazya_20stricta_20[genbank_20GCA_5F001752375.1_202016-10-04] 979 sequences; 274,354,041 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq940 107 4e-18 >seq940 Length=8971605 Score = 107 bits (118), Expect = 4e-18 Identities = 365/565 (65%), Gaps = 7/565 (1%) Strand=Plus/Minus Query 48122 TAGAGCATGCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAG 48181 ||||| | ||| || ||||| | || | || || || || ||| | | |||| ||| Sbjct 8502680 TAGAGTAAGCACGCGAAGTCACAATGGAGACCCTCATCTCGCGAGATTAACTCGTTCGAG 8502621 Query 48182 AAGCAGAGACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCA 48241 ||| | ||| ||||| | ||| | | || | ||| || || || ||| || Sbjct 8502620 AAGGTCAAACCGGGCATTAGCCCGCGTTTCTTTAACCAAAATATCGCGCAAAAACTCCCC 8502561 Query 48242 GAGAAGAAGATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTC 48301 |||||||| || ||||| || || || ||| | | ||| | || || ||| Sbjct 8502560 GAGAAGAATATCCCCTCGACGCAAGCAAAGGCGACCAAACGCTCCGCAAATGA----TTC 8502505 Query 48302 TTGTCTGA-GATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTC 48360 | | | |||||| || ||||| | |||||||| | | ||| || || ||||| Sbjct 8502504 TCCGCCGTCGATCCATCGGAGGGCCCACTTGGCCTTCTTTTCAACGCAAGGTATGGTCTC 8502445 Query 48361 TATGGCCCGGAAGAGCTTCTTGCACTCACCTGCGTCCGCAACATAGGTAGTGAGCAGCTT 48420 || || | |||||| | | ||| ||| |||| || |||| ||||| Sbjct 8502444 CATTGCGTGAAAGAGCCTGTGCTTCTCGTCTGGGTCCTTAATYTAGGACTCGAGCAAGAG 8502385 Query 48421 TGCGTACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGC 48480 |||||||| || || | || || || || || ||||| ||||||||||| | || Sbjct 8502384 YCTATACATCTCGGAATGAATGTTTTCGATGGCAATTTGGAAGCCGTAGAAGGCACGYGC 8502325 Query 48481 CTCAAACACCTGCACTTCTGTGGAGAATCTCTCCAGC-AGATTCTCATTGACTATCCCAT 48539 ||| | ||||| |||||| | ||||| ||| || |||||||| || || |||| Sbjct 8502324 CTCGGAGACCTGAACTTCTTTCATGAATC-GTCCGGCGAGATTCTCCAAAACGATGCCAT 8502266 Query 48540 CTGAAGCAGCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAG 48599 |||| | || || || || || || | ||| || || ||||||| ||||||| Sbjct 8502265 CTGAGGKGGCGAAAAATGCCAGAACGCGACTAATAAAGTGACGCTCGTCAGGGGTGAGGT 8502206 Query 48600 CATTCCAGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGA 48659 | ||| | | ||| | | ||||| || || || ||||||||||||| || Sbjct 8502205 TTTCCCATTGACGCATGTCCTGGGAGAGGTCGACCTCCTCGGCAGTCCAGAAGGAGGCCT 8502146 Query 48660 GTGCTTTTTTGTACATGCCCCATAT 48684 |||||| |||||||| |||| || Sbjct 8502145 CTGCTTTCTTGTACATCTCCCAAAT 8502121 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931521400367360