Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhazya_20stricta_20[genbank_20GCA_5F001752375.1_202016-10-04] 979 sequences; 274,354,041 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq940 113 8e-20 >seq940 Length=8971605 Score = 113 bits (124), Expect = 8e-20 Identities = 373/572 (65%), Gaps = 17/572 (3%) Strand=Plus/Plus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||||||||||||||||| || | ||| |||||| ||||| ||| | || || Sbjct 8502121 ATTTGGGAGATGTACAAGAAAGCAGAGGCCTCCTTCTGGACTGCCGAGGAGGTCGACCTC 8502180 Query 25537 GCCAAGGACATGGACGGC--TGGTACGCTCTATCCAAAGACGAGCAGCATTTTCTCAAGT 25594 || |||||||| || | ||| | || || ||||||| || ||| | | Sbjct 8502181 TCCCAGGACATG--CGTCAATGGGAAAACCTCACCCCTGACGAGCGTCACTTTATTAGTC 8502238 Query 25595 ACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGAT 25654 ||| ||||||| || || |||| ||||| || || |||||||| || ||| Sbjct 8502239 GCGTTCTGGCATTTTTCGCCMCCTCAGATGGCATCGTTTTGGAGAATCTCGCCGGACGAT 8502298 Query 25655 TCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTG-TTTCTACGGTTTCCAGATGGCCATC 25713 ||| | ||||| ||| | |||| | ||| |||||||| ||||| || |||||| Sbjct 8502299 TCATGAAAGAAGTTCAGGTCTCCGAGG-CRCGTGCCTTCTACGGCTTCCAAATTGCCATC 8502357 Query 25714 GAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGAT---GACGTACATTACAGACGTC 25770 ||||| | || || ||| ||||| | || || | | | || |||| ||| Sbjct 8502358 GAAAACATTCATTCCGAGATGTAT---AGRCTCTTGCTCGAGTCCTARATTAAGGACCCA 8502414 Query 25771 GCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGCG 25830 | ||||| | |||| ||| || || ||| |||||| || | | | |||||| Sbjct 8502415 GACGAGAAGCACAGGCTCTTTCACGCAATGGAGACCATACCTTGCGTTGAAAAGAAGGCC 8502474 Query 25831 CGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAGCC 25890 ||||||| | |||||| || || | | | |||| ||||| |||| ||| Sbjct 8502475 AAGTGGGCCCTCCGATGGATCGACGGC---GGAGAATCATTTGCGGAGCGTTTGGTCGCC 8502531 Query 25891 TTTGCTGCTGTGGAGGGCATCTTTTTC-AGCGGTTCGTTTGCGGCCATCTTCTGGCTCAA 25949 |||||| || ||||| || || ||| | || ||||| || || || ||| | || Sbjct 8502532 TTTGCTTGCGTCGAGGGGATATTCTTCTCGGGGAGTTTTTGC-GCGATATTTTGGTTAAA 8502590 Query 25950 GCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGGG 26009 | | ||| |||||||| || ||| || |||||| | ||| | || ||||| Sbjct 8502591 GAAACGCGGGCTAATGCCCGGTTTGACCTTCTCGAACGAGTTAATCTCGCGAGATGAGGG 8502650 Query 26010 TCTCCACAGAGATTTTGCCTGCCTGCTCTACA 26041 |||||| | || || || ||| | ||||||| Sbjct 8502651 TCTCCATTGTGACTTCGCGTGCTTACTCTACA 8502682 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928833433261760