Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhazya_20stricta_20[genbank_20GCA_5F001752375.1_202016-10-04] 979 sequences; 274,354,041 total letters Query= NC_019945.1 Length=132978 Score E Sequences producing significant alignments: (Bits) Value seq977 91.5 1e-13 seq946 87.8 2e-12 >seq977 Length=5547227 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 |||||||||||||| ||||| |||| || || || ||||| || || ||| Sbjct 1049308 ATGCAAATATTTGTTAAAACTCTAACCGGCAAGACGATTACTCTTGAGGTTGAGGGTTCT 1049367 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || ||| | | | || ||||| ||||| || || ||||| | || || || Sbjct 1049368 GACACGATTGACAATGTCAAGGCCAAAATTCAGGATAAGGAGGGGATTCCTCCGGACCAG 1049427 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 |||||||| |||||||| || || || ||||| || |||| | ||||||||||| Sbjct 1049428 CAGAGACTCATCTTTGCTGGGAAGCAGTTGGAGGACGGCCGAACTCTTGCCGATTATAAT 1049487 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATTAAG 28768 |||||||| || || ||||| || |||| || || Sbjct 1049488 ATTCAAAAGGAGTCGACTCTTCATCTGGTCTTGAG 1049522 >seq946 Length=5553863 Score = 87.8 bits (96), Expect = 2e-12 Identities = 87/113 (77%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 28668 GATCAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGAT 28727 ||||| |||||||| || ||||| || || |||||||||||| ||| ||||||| Sbjct 333539 GATCAGCAGAGACTGATTTTTGCTGGTAAGCAATTGGAAGATGGCCGTACTTTGGCCGAC 333480 Query 28728 TATAACATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGG 28780 ||||| || ||||||||||| || || ||| |||| || || | ||||||| Sbjct 333479 TATAATATCCAAAAAGAATCAACACTTCACTTGGTTTTGAGGCTCAGAGGAGG 333427 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425399724256041