Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhazya_20stricta_20[genbank_20GCA_5F001752375.1_202016-10-04] 979 sequences; 274,354,041 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq940 168 8e-36 >seq940 Length=8971605 Score = 168 bits (186), Expect = 8e-36 Identities = 215/294 (73%), Gaps = 2/294 (1%) Strand=Plus/Minus Query 869633 GAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGG 869692 || || ||||| |||||||| || ||||||||||| ||||| | |||| | || || Sbjct 8502371 GAATGAATGTTTTCGATGGCAATTTGGAAGCCGTAGAAGGCACGYGCCTCGGAGACCTGA 8502312 Query 869693 ACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAA 869752 || || |||||||| || ||||| || ||||| |||||||| || || ||||||| Sbjct 8502311 ACTTCTTTCATGAATCGTCCGGCGAGATTCTCCAAAACGATGCCATCTGAGGKGGCGAAA 8502252 Query 869753 AAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGAGCGACACCCAGTGGACG 869812 || ||||| ||| | | |||||||| |||||||| | |||| |||| | |||| Sbjct 8502251 AATGCCAGAACGCGACTAATAAAGTGACGCTCGTCAGGGGTGAGGTTTTCCCA-TTGACG 8502193 Query 869813 -GTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTGTA 869871 |||| | |||||| ||||||||||| ||||||| |||||||| || || ||||| Sbjct 8502192 CATGTCCTGGGAGAGGTCGACCTCCTCGGCAGTCCAGAAGGAGGCCTCTGCTTTCTTGTA 8502133 Query 869872 CATCTCCCATACTTGCTGGTAGCGGATAGGGAAGAGGACAAAGCGGTTGGGGTT 869925 ||||||||| | || |||| | || || || | | ||||||| ||||| Sbjct 8502132 CATCTCCCAAATCTGAGGGTATTGAATTGGAAACATGCAGAAGCGGTCTGGGTT 8502079 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107058858675343