Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhazya_20stricta_20[genbank_20GCA_5F001752375.1_202016-10-04] 979 sequences; 274,354,041 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq977 93.3 7e-14 seq946 87.8 3e-12 >seq977 Length=5547227 Score = 93.3 bits (102), Expect = 7e-14 Identities = 147/211 (70%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||||||||| | ||||| |||| || || || |||||| |||| || || | | Sbjct 1049309 TGCAAATATTTGTTAAAACTCTAACCGGCAAGACGATTACTCTTGAGGTTGAGGGTTCTG 1049368 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || ||| | ||||| || ||||| || ||| || || ||||| || || || | Sbjct 1049369 ACACGATTGACAATGTCAAGGCCAAAATTCAGGATAAGGAGGGGATTCCTCCGGACCAGC 1049428 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | |||||||| ||||| || || || || || || |||| | | |||||||||| Sbjct 1049429 AGAGACTCATCTTTGCTGGGAAGCAGTTGGAGGACGGCCGAACTCTTGCCGATTATAATA 1049488 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATT 146242 | ||||| || |||||| | ||| | || || Sbjct 1049489 TTCAAAAGGAGTCGACTCTTCATCTGGTCTT 1049519 Score = 87.8 bits (96), Expect = 3e-12 Identities = 146/211 (69%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || || | ||||| |||| || || || |||||| |||| || || | || Sbjct 1026528 TGCAGATCTTTGTCAAAACTCTAACCGGCAAGACGATTACTCTTGAGGTTGAGAGTTCCG 1026469 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || ||| | || || || |||||| ||| ||| || |||||||| || || || | Sbjct 1026468 ACACGATTGACAACGTCAAGGCTAAAATTCAAGATAAGGAGGGCATTCCTCCGGACCAGC 1026409 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | |||||||| || || || || || || || || | || | | |||||||||| Sbjct 1026408 AGAGACTCATCTTCGCTGGGAAGCAGTTGGAGGACGGCCGTACTCTTGCCGATTATAATA 1026349 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATT 146242 | ||||| || |||||| | ||| | || || Sbjct 1026348 TTCAAAAGGAGTCGACTCTTCATCTTGTCTT 1026318 Score = 84.2 bits (92), Expect = 3e-11 Identities = 155/226 (69%), Gaps = 1/226 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || || | || || || || || || || |||||| | || || || || Sbjct 917532 TGCAGATCTTTGTGAAGACTTTGACTGGGAAGACCATTACTTTGGAGGTTGAGAGCTCCG 917591 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | |||||| | ||||| || || || || |||||||||||||| || ||||| | Sbjct 917592 ACACTATTGACAATGTCAAGGCCAAGATTCAGGACAAAGAAGGCATTCCTCCTGATCAGC 917651 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | | || |||||||| || ||||| || || ||| || || | |||||||||| | Sbjct 917652 AGCGTCTGATTTTTGCTGGCAAACAGTTTGAAGATGGCAGGACACTTGCAGATTATAACA 917711 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257 | || || ||||| ||| | ||| || || |||| || ||||| Sbjct 917712 TCCACAAGGAATCAACTCTACATCAGGTGTTGTGATTGAG-GGAGG 917756 >seq946 Length=5553863 Score = 87.8 bits (96), Expect = 3e-12 Identities = 98/131 (75%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 146127 AAAGAAGGCATTCCACCCGATCAACAAAGACTCATTTTTGCAGGTAAACAATTAGATGAT 146186 |||||||| ||||| || ||||| || ||||| |||||||| ||||| ||||| || ||| Sbjct 333557 AAAGAAGGTATTCCTCCTGATCAGCAGAGACTGATTTTTGCTGGTAAGCAATTGGAAGAT 333498 Query 146187 AATAGAACGTTAACAGATTATAATATACAAAAAGAATCGACTATCCATTTAGTATTACGA 146246 | || || | || |||||||| ||||||||||| || | || || || || | Sbjct 333497 GGCCGTACTTTGGCCGACTATAATATCCAAAAAGAATCAACACTTCACTTGGTTTTGAGG 333438 Query 146247 TTAAGAGGAGG 146257 | |||||||| Sbjct 333437 CTCAGAGGAGG 333427 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 786156779288680