Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhazya_20stricta_20[genbank_20GCA_5F001752375.1_202016-10-04] 979 sequences; 274,354,041 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq977 179 3e-40 seq964 154 1e-32 seq978 140 2e-28 seq946 95.1 9e-15 seq937 95.1 9e-15 >seq977 Length=5547227 Score = 179 bits (198), Expect = 3e-40 Identities = 178/228 (78%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || ||||| | ||||||||||| |||||||||||| ||||||||||||||||||||||| Sbjct 1025847 CCACCCCTTAGACGCAGCACCAGATGAAGCGTGGACTCTTTTTGAATGTTATAATCCGCC 1025906 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||| || || || | || || |||||| | ||||||||||| || ||||| || Sbjct 1025907 AGGGTTCGGCCGTCTTCCAACTGCTTCCCAGCAAAGATCAATCTTTGTTGGTCCGGAGGG 1025966 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 || || || || || || ||| ||||| |||||| | || | ||| |||||| ||| || Sbjct 1025967 ATCCCTTCCTTATCCTG-AATCTTTGTCTTGACATTATCAATAGTATCAGAACTTTCAAC 1026025 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||| || || ||||| || || | |||||| ||||| |||||||| Sbjct 1026026 CTCAAGTGTGATGGTTTTACCGGTGAGGGTTTTGACAAAGATCTGCAT 1026073 Score = 156 bits (172), Expect = 3e-33 Identities = 166/217 (76%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631 |||| || | ||| | ||||| |||||||||||||| || || |||| ||| ||| | Sbjct 917061 CGCAAGACAAGATGTAAGGTGGACTCTTTTTGAATGTTGTAGTCAGCAAGGGTTCGACCA 917002 Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691 || || |||||||| |||||| | ||||||||||||||||| || || ||||| || ||| Sbjct 917001 TCCTCCAGTTGTTTCCCAGCAAAGATCAATCTTTGCTGATCAGGTGGGATACCTTCCTTG 916942 Query 29692 TCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 ||||| ||| |||| ||| || | || | ||||||||| || || ||||| || || Sbjct 916941 TCTTG-AATCTTTGCCTTGGCATTATCGATGGTGTCAGAACTCTCAACCTCAAGCGTGAT 916883 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 || ||||| || | ||| |||||||| || ||||| Sbjct 916882 GGTCTTGCCTGTGATGGTCTTAACAAAAATTYGCATT 916846 Score = 150 bits (166), Expect = 1e-31 Identities = 158/205 (77%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 29584 TGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGT 29643 ||||| || || || || || || || ||||| |||| ||| ||| ||| || |||||| Sbjct 917277 TGAAGTGTAGACTCCTTCTGGATATTGTAATCAGCAAGGGTACGACCATCCTCCAGTTGT 917218 Query 29644 TTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTT 29703 || || ||| ||||||||||||||||||| || ||||| ||||| ||||| || |||||| Sbjct 917217 TTCCCCGCAGATATCAATCTTTGCTGATCTGGAGGAATCCCCTCCTTGTCCTG-AATTTT 917159 Query 29704 TG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGT 29762 || ||||||| | || | || || || ||| ||||||||||| || || ||||| || Sbjct 917158 TGCTTTGACATTGTCAATTGTATCTGAGCTTTCAACTTCAAGAGTGATGGTCTTGCCTGT 917099 Query 29763 TAAGGTTTTAACAAATATCTGCATT 29787 | ||| ||||| || | |||||| Sbjct 917098 AAGGGTCTTAACGAAGACTTGCATT 917074 Score = 145 bits (160), Expect = 6e-30 Identities = 171/230 (74%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618 ||| |||| | |||| || | ||| || ||||| || ||||||||||| || || || Sbjct 916846 TCCACCCCGAAGTCGCAAGACGAGATGGAGAGTGGACTCCTTTTGAATGTTGTAGTCAGC 916787 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 || || |||| ||| || |||||||| || ||| | ||||||||||||||||| || || Sbjct 916786 AAGAGTTCGAGCATCCTCCAGTTGTTTCCCGGCAAAGATCAATCTTTGCTGATCAGGTGG 916727 Query 29679 AATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTA 29737 | ||| || |||||||| ||| |||| ||||| | || | ||||||||| | | Sbjct 916726 GAYACCTTCCTTGTCTTG-AATCTTTGCCTTGACGTTATCAATGGTGTCAGAACTCTYAA 916668 Query 29738 CTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 | ||||| || || || ||||| | | ||| | ||||||||| |||||| Sbjct 916667 CCTCAAGCGTGATGGTCTTGCC--TGAGGGTCTWAACAAATATTTGCATT 916620 Score = 143 bits (158), Expect = 2e-29 Identities = 170/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || |||||||| ||||||||||||| ||| || ||||| || ||||| || || || ||| Sbjct 917529 CCACCCCTCAATCGCAGCACCAAATTAAGAGTTGATTCCTTCTGAATTTTGTAGTCAGCA 917470 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | | | | ||| || ||||| ||||||||| ||||||| | |||||| || || ||| Sbjct 917469 AGGATTCTCCCATCTTCAAGTTGCTTGCCAGCAAATATCAAGCGTTGCTGGTCTGGAGGA 917410 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 || || || |||| || |||||| | ||| ||| | || || | || || ||| || Sbjct 917409 ATGCCTTCCTTGTTCTG-AATTTTAGCTTTAACATTGTCAACTGCATCTGAGCTTTCGAC 917351 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 |||||| || || ||||| ||||| | || || ||||| ||||| || Sbjct 917350 TTCAAGGGTAATGGTTTTCCCAGTAAGAGTCTTCACAAAGATCTGTAT 917303 Score = 138 bits (152), Expect = 9e-28 Identities = 158/210 (75%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 29578 ACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCG 29637 |||| |||||| || || || |||||||| |||||||| |||| || || || || Sbjct 1049516 ACCAGATGAAGAGTCGACTCCTTTTGAATATTATAATCGGCAAGAGTTCGGCCGTCCTCC 1049457 Query 29638 AGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGT 29697 | || || |||||| | || | ||| ||||| ||||| ||||| ||||| || || || Sbjct 1049456 AACTGCTTCCCAGCAAAGATGAGTCTCTGCTGGTCCGGAGGAATCCCCTCCTTATCCTG- 1049398 Query 29698 AATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTT 29756 |||||| | |||||| | || | ||||||||| || || |||||||| || || || Sbjct 1049397 AATTTTGGCCTTGACATTGTCAATCGTGTCAGAACCCTCAACCTCAAGAGTAATCGTCTT 1049338 Query 29757 GCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||| |||| |||||||||||||| ||||| Sbjct 1049337 GCCGGTTAGAGTTTTAACAAATATTTGCAT 1049308 Score = 129 bits (142), Expect = 5e-25 Identities = 158/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || || | ||| || ||||| || || |||||||||||||| || | ||| ||| Sbjct 1026542 ACGGAGAACGAGATGGAGGGTGGACTCCTTCTGAATGTTATAATCGGCTAGGGTCCGACC 1026601 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 || |||||||||||||| || | || | | |||||||| || || || ||||| || Sbjct 1026602 GTCCTCGAGTTGTTTGCCGGCGAAGATTAGGCGCTGCTGATCGGGAGGGATGCCCTCCTT 1026661 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 |||||| | || |||||| | || | || || ||| || || || ||||| || Sbjct 1026662 GTCTTGGATCTTAGCCTTGACATTATCGATGGTATCGGAACTCTCGACCTCGAGAGTGAT 1026721 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||| || |||| |||||| ||||| |||||||| Sbjct 1026722 GGTTTTACCGGTTAGGGTTTTCACAAAGATCTGCAT 1026757 Score = 122 bits (134), Expect = 7e-23 Identities = 163/224 (73%), Gaps = 2/224 (1%) Strand=Plus/Minus Query 29564 CCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGG 29623 ||||||| | || |||| ||| || || ||||| || || ||||||||||| |||| | Sbjct 917753 CCCTCAATCACAACACCTGATGTAGAGTTGATTCCTTGTGGATGTTATAATCTGCAAGTG 917694 Query 29624 TGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATAC 29683 | | ||| || | |||||||||||| | |||| | |||||||| || ||||| | Sbjct 917693 TCCTGCCATCTTCAAACTGTTTGCCAGCAAAAATCAGACGCTGCTGATCAGGAGGAATGC 917634 Query 29684 CCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCA 29742 | |||||||| || ||| || | |||||| | || | |||||| || || || || Sbjct 917633 CTTCTTTGTCCTG-AATCTTGGCCTTGACATTGTCAATAGTGTCGGAGCTCTCAACCTCC 917575 Query 29743 AGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 | ||| || || || ||||| || || || ||||| |||||||| Sbjct 917574 AAAGTAATGGTCTTCCCAGTCAAAGTCTTCACAAAGATCTGCAT 917531 Score = 118 bits (130), Expect = 8e-22 Identities = 157/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631 || || || | ||| || ||||| || || |||||||||||||| || | || || Sbjct 1049294 CGGAGAACGAGATGGAGGGTGGACTCCTTCTGAATGTTATAATCGGCGAGCGTCCGGCCG 1049235 Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691 || |||||||| ||||| || | || | | |||||||| || ||||||||||| || Sbjct 1049234 TCCTCGAGTTGCTTGCCGGCGAAAATGAGGCGCTGCTGATCTGGAGGAATACCCTCCTTA 1049175 Query 29692 TCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATA 29751 ||||| | || |||||| | || | || |||||| || || || ||||| || Sbjct 1049174 TCTTGGATCTTAGCCTTGACATTATCAATGGTATCAGAACTCTCGACCTCGAGAGTGATG 1049115 Query 29752 GTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 || ||||| |||| |||||| ||||| || ||||| || Sbjct 1049114 GTCTTGCCGGTTAGGGTTTTCACAAAAATTTGCATCTT 1049077 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || || | ||| || || | ||||| || ||||| || || ||||||||||| || Sbjct 1025619 CCGCCTCTAAGACGGAGAACAAGGTGAAGAGTCGATTCCTTCTGGATGTTATAATCAGCC 1025678 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || || ||| || ||||| || ||||| | || | || ||||||||||| ||| Sbjct 1025679 AGAGTACGGCCATCTTCAAGTTGCTTCCCAGCGAAGATAAGCCTCTGCTGATCCGGAGGA 1025738 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 || ||||| ||||| || ||| |||| || || | |||| || || || || || Sbjct 1025739 ATTCCCTCCTTGTCCTG-AATCTTTGCCTTCACGTTGTCTATGGTATCTGAGCTCTCAAC 1025797 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || || || || || || || |||||||| ||||||||||| Sbjct 1025798 CTCCAGCGTAATCGTCTTCCCGGTCAATGTTTTAACGAATATCTGCAT 1025845 Score = 95.1 bits (104), Expect = 9e-15 Identities = 152/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631 ||||| |||| ||| || ||||| ||||| |||||||||||||| |||| || || Sbjct 4465808 CGCAGGACCAGATGGAGGGTGGACTCTTTCTGAATGTTATAATCGGCAAGTGTACGTCCG 4465749 Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691 || || ||||| | || | | || | | || |||||||| || | ||||| || Sbjct 4465748 TCCTCCAGTTGCATCCCGGAGAAGATAAGGCGCTGGTGATCCGGAGGGMTGCCCTCCTTA 4465689 Query 29692 TCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATA 29751 ||||| | ||| || || | || | || || ||| || || || ||||||| Sbjct 4465688 TCTTGGATTTTGGCCTTCACGTTATCGATGGTATCTGAACTCTCAACCTCGAGAGTTACG 4465629 Query 29752 GTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTTA 29790 || |||||||||| | | || || || ||||||||| || Sbjct 4465628 GTCTTGCCAGTTAGGTTCTTCACGAAGATCTGCATTGTA 4465590 >seq964 Length=1826015 Score = 154 bits (170), Expect = 1e-32 Identities = 173/229 (76%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618 |||||||||||| | || ||||| ||||| |||||||| || ||||||||||| || || Sbjct 764273 TCCTCCCCTCAATCTGAGGACCAAGTGAAGGGTGGATTCCTTCTGAATGTTATAGTCAGC 764332 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 || |||||| || ||||| || ||||| ||| | ||||| || ||||| || || || Sbjct 764333 AAGGGTGCGCCCGTCCTCGAGCTGCTTGCCGGCAAAGATCAACCTCTGCTGGTCTGGTGG 764392 Query 29679 AATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTA 29737 ||||| || |||||||| |||||| | ||| ||| | || | || |||||| || | Sbjct 764393 GATACCTTCCTTGTCTTG-AATTTTAGCTTTCACATTGTCAATGGTATCAGAACTCTCGA 764451 Query 29738 CTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 | || || || || || || ||||| | ||| || || || |||||||| Sbjct 764452 CCTCCAGGGTGATGGTCTTTCCAGTGAGGGTCTTCACGAAGATCTGCAT 764500 Score = 147 bits (162), Expect = 2e-30 Identities = 172/230 (75%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618 |||||| || || | ||||||||| || || || || || ||||| || || || || || Sbjct 764045 TCCTCCTCTTAACCTCAGCACCAAGTGCAGTGTAGACTCCTTTTGGATATTGTAGTCAGC 764104 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 || ||||| ||| ||||| || |||||||| | ||||| || ||||||||||| || Sbjct 764105 AAGAGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAACCTCTGCTGATCCGGTGG 764164 Query 29679 AATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTA 29737 || ||||| ||||| || |||||||| || ||| | || | ||| ||||| || | Sbjct 764165 GATTCCCTCCTTGTCCTG-AATTTTTGCCTTCACATTATCAATAGTATCAGAGCTCTCCA 764223 Query 29738 CTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 | |||||||| || || || || || ||||| || || || ||||||||| Sbjct 764224 CCTCAAGAGTAATGGTCTTCCCGGTCAAGGTCTTCACGAAGATCTGCATT 764273 Score = 140 bits (154), Expect = 2e-28 Identities = 173/236 (73%), Gaps = 3/236 (1%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 |||||||||||||| || ||||| || || || ||||| ||||||||||| ||||| ||| Sbjct 764958 CCTCCCCTCAAACGAAGAACCAAGTGGAGGGTCGATTCCTTTTGAATGTTGTAATCAGCA 765017 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || | || ||||| || || || ||| | |||| |||||||| || || ||| Sbjct 765018 AGAGTTCTGCCGTCCTCGAGCTGCTTTCCGGCAAAGATCAGCCTTTGCTGGTCTGGGGGA 765077 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || || || || ||||| | ||| || ||| | |||| ||||| || || || Sbjct 765078 ATCCCTTCCTTATCTTGGATCTTTGCCTTAACATTGTCTATGGTGTCGGAGCTCTCGACC 765137 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT---TTTAAA 29792 || ||||| || || || ||||| | ||| |||||||| |||||||| |||||| Sbjct 765138 TCGAGAGTAATTGTCTTTCCAGTAAGGGTCTTAACAAAGATCTGCATCTGTTTAAA 765193 Score = 113 bits (124), Expect = 3e-20 Identities = 155/217 (71%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || || | ||||| ||||| || || || ||||| || || || | || || Sbjct 763829 ACGGAGAACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCCAGAGTACGTCC 763888 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || | ||| || |||||| | |||||||||||||| || || ||||||||||| || Sbjct 763889 ATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGCTGGTCGGGGGGAATACCCTCCTT 763948 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 ||| || | ||| || ||| | || | ||||| ||| || || || | ||| || Sbjct 763949 GTCCTGGATTTTAGCCTTCACATTATCAATTGTGTCGGAACTCTCCACCTCCAAAGTGAT 764008 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 || || || || | ||| || ||||| ||||||||| Sbjct 764009 GGTCTTTCCTGTCAGGGTCTTCACAAAAATCTGCATT 764045 >seq978 Length=8767375 Score = 140 bits (154), Expect = 2e-28 Identities = 170/229 (74%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618 ||||||||||| | || ||||| ||||| || ||||| || ||||||||||| || || Sbjct 3245847 TCCTCCCCTCAGCCTGAGGACCAAGTGAAGGGTCGATTCCTTCTGAATGTTATAGTCAGC 3245906 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 || || || || ||||| || ||||| ||| | |||||||| ||||| || || || Sbjct 3245907 AAGAGTACGCCCGTCCTCGAGCTGCTTGCCGGCAAAGATCAATCTCTGCTGGTCTGGTGG 3245966 Query 29679 AATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTA 29737 || ||||| ||||| || |||||||| |||||| | || | || ||||| || | Sbjct 3245967 GATCCCCTCCTTGTCCTG-AATTTTTGCCTTGACATTGTCGATGGTATCAGAGCTCTCAA 3246025 Query 29738 CTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 | || ||||| || || || || || ||||| || || || |||||||| Sbjct 3246026 CCTCCAGAGTAATGGTCTTCCCTGTCAAGGTCTTCACGAAGATCTGCAT 3246074 Score = 131 bits (144), Expect = 1e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || |||| ||| || ||||| || || |||||||| || || ||||| || || || Sbjct 3246304 CCACCTCTCAGACGGAGGACCAAGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCGGCT 3246363 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | |||||| || |||||||| || || ||| | |||| || ||||| || || ||| Sbjct 3246364 AGAGTGCGACCGTCCTCGAGTTGCTTTCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGA 3246423 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || || || || || |||| || ||||||| | || | ||||| || || ||| Sbjct 3246424 ATTCCTTCCTTATCCTGTATCTTGGCTTTGACATTGTCAATGGTGTCGGAGCTCTCAACT 3246483 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||| || ||||| || || || | ||| ||||||||||| ||||| Sbjct 3246484 TCAAGGGTGATAGTCTTTCCGGTGAGGGTCTTAACAAATATTTGCAT 3246530 Score = 122 bits (134), Expect = 7e-23 Identities = 169/236 (72%), Gaps = 3/236 (1%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||| |||| ||| || ||||| || || || || || ||||||||||| ||||| ||| Sbjct 3246532 CCTCCTCTCAGACGGAGGACCAAGTGGAGGGTTGACTCCTTTTGAATGTTGTAATCGGCA 3246591 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||| | || |||||||| || || || | |||| ||||||||||| || || Sbjct 3246592 AGGGTCCTGCCGTCCTCGAGTTGCTTTCCGGCGAAGATCAGCCTTTGCTGATCTGGAGGG 3246651 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || || || || ||||| | ||| ||||||| | || | ||||| || || || Sbjct 3246652 ATTCCTTCCTTATCTTGGATCTTTGCTTTGACATTGTCGATGGTGTCGGAGCTCTCGACC 3246711 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT---TTTAAA 29792 || ||||| || || || || || | ||| || || || |||||||| |||||| Sbjct 3246712 TCGAGAGTAATTGTCTTTCCGGTAAGGGTCTTCACGAAGATCTGCATCTGTTTAAA 3246767 >seq946 Length=5553863 Score = 95.1 bits (104), Expect = 9e-15 Identities = 108/145 (74%), Gaps = 2/145 (1%) Strand=Plus/Plus Query 29552 ATCGTTGTCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTAT 29611 |||||| ||||| || | | || ||||| ||||| || ||||||||||| || |||| Sbjct 333421 ATCGTT--CCTCCTCTGAGCCTCAAAACCAAGTGAAGTGTTGATTCTTTTTGGATATTAT 333478 Query 29612 AATCCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGAT 29671 | || || | || || ||| || | ||| || |||||| | |||| ||| ||||||| Sbjct 333479 AGTCGGCCAAAGTACGGCCATCTTCCAATTGCTTACCAGCAAAAATCAGTCTCTGCTGAT 333538 Query 29672 CCGGCGGAATACCCTCTTTGTCTTG 29696 | || |||||||| ||||| || || Sbjct 333539 CAGGAGGAATACCTTCTTTKTCCTG 333563 >seq937 Length=9237706 Score = 95.1 bits (104), Expect = 9e-15 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || | ||| || || |||| || || || || || || || |||||||||||||| Sbjct 196097 CCACCACGCAAGCGGAGGACCAGGTGCAGGGTAGACTCCTTCTGGATGTTATAATCCGCT 196038 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||| | ||| ||||| || || || || | || | | |||||||| || || Sbjct 196037 AGGGTTCTGCCATCCTCGAGCTGCTTACCGGCGAAGATAAGCCGCTGCTGATCAGGTGGG 195978 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || || || || ||||| | || |||||| | || | ||||| || ||| || Sbjct 195977 ATGCCTTCCTTATCTTGGATCTTAGCCTTGACATTGTCAATGGTGTCGGAGGATTCGACC 195918 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 || || ||||| || || || |||| |||||| || || |||||||| || Sbjct 195917 TCCAGGGTTATGGTCTTACCCGTTAGGGTTTTCACGAAGATCTGCATCTT 195868 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385214603733039