Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhazya_20stricta_20[genbank_20GCA_5F001752375.1_202016-10-04] 979 sequences; 274,354,041 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq957 96.9 8e-15 seq938 87.8 4e-12 >seq957 Length=6255442 Score = 96.9 bits (106), Expect = 8e-15 Identities = 132/181 (73%), Gaps = 4/181 (2%) Strand=Plus/Minus Query 305309 CATTTGAATGACAATGATTGGGTTCTGTTCAATAGGCAACCATCACTGCATAAAATGTCT 305368 ||||||||||| ||||| ||||| || ||| ||||||| |||||||||||||| Sbjct 1937527 CATTTGAATGATGGTGATTTTGTTCTTTTTAATCGGCAACCTAGTCTGCATAAAATGTCA 1937468 Query 305369 ATGATGGCTCATAAAGTCAAAGTATTAT-CTGGATTGACATTTC-GATTAAATGTAAGTG 305426 || |||| |||| ||||| || || | ||| | ||| |||| ||| | || Sbjct 1937467 ATTATGGGGCATAGGATCAAA--ATCATGCCATATTCAACGTTCAGATTGAATTTGTCTG 1937410 Query 305427 CTTGTACGCCTTATAATGCGGATTTTGATGGAGATGAAATGAATATGCATGTACCTCAAT 305486 | | || |||||||| |||||||||||||| |||||||| |||||||| || || | Sbjct 1937409 TCACTTCACCGTATAATGCTGATTTTGATGGAGACGAAATGAACATGCATGTTCCACAGT 1937350 Query 305487 C 305487 | Sbjct 1937349 C 1937349 >seq938 Length=6919174 Score = 87.8 bits (96), Expect = 4e-12 Identities = 137/194 (71%), Gaps = 4/194 (2%) Strand=Plus/Minus Query 279899 AAGATTATATTCAGTTGTTTCAAAAGAAAATTGGTAAAGGAAATTCGTGTTGCTCAGTTA 279958 |||||| | ||| ||| ||||| ||||| || ||||||||| || || ||||| Sbjct 3922439 AAGATTCTTTTCTGTTCCTTCAAGAGAAACTTTGTAAAGGAAGCAAAAGTAGCCCAGTTC 3922380 Query 279959 GCAGGTTATGTTTCAGAACATGCAGGTTATCATCACGGTGA--AGCGTCTCTTCAAGGTG 280016 | ||||||||||| || || ||| ||| ||||| ||||| || |||| || | Sbjct 3922379 TCTGGTTATGTTTCTGAGCACTCAGCTTACCATCATGGTGAGCAGAGTCTTGCCA--GCA 3922322 Query 280017 CTATTGTAGGTCTTGCCCAAGATTTTATGGCTTCAAACAACTTAAATCTGCTTTCACCAA 280076 | ||| | || | || || |||||| | | |||||| | ||||| ||| ||||| Sbjct 3922321 CAATTATTGGCATGGCTCAGGATTTTGTTGGCAGTAACAACATTAATCTTCTTCAACCAA 3922262 Query 280077 ATGGTCAATTTGGT 280090 ||||||| |||||| Sbjct 3922261 ATGGTCAGTTTGGT 3922248 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186797913287819