Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhazya_20stricta_20[genbank_20GCA_5F001752375.1_202016-10-04] 979 sequences; 274,354,041 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq978 93.3 4e-14 seq977 89.7 5e-13 seq946 82.4 7e-11 >seq978 Length=8767375 Score = 93.3 bits (102), Expect = 4e-14 Identities = 167/243 (69%), Gaps = 1/243 (0%) Strand=Plus/Minus Query 25159 TTTTCAATTAAACAACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGAT 25218 |||| | ||||||| ||||| | || || || || | |||||||| | || || | Sbjct 3246773 TTTTGATTTAAACAG-ATGCAGATCTTCGTGAAGACCCTTACCGGAAAGACAATTACTCT 3246715 Query 25219 CGAAGTCGAAGCCAACGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGG 25278 ||| ||||| | ||| || ||||| | || ||| ||| || ||||| || || Sbjct 3246714 CGAGGTCGAGAGCTCCGACACCATCGACAATGTCAAAGCAAAGATCCAAGATAAGGAAGG 3246655 Query 25279 TATACCGCCCGATCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAA 25338 || || || ||||||||||| || || | || ||| || |||||||| || | || | Sbjct 3246654 AATCCCTCCAGATCAGCAAAGGCTGATCTTCGCCGGAAAGCAACTCGAGGACGGCAGGAC 3246595 Query 25339 TGTCAGCGATTACAATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGG 25398 | ||||||||| |||||||| || || ||| | || || || | | ||||||| Sbjct 3246594 CCTTGCCGATTACAACATTCAAAAGGAGTCAACCCTCCACTTGGTCCTCCGTCTGAGAGG 3246535 Query 25399 AGG 25401 ||| Sbjct 3246534 AGG 3246532 >seq977 Length=5547227 Score = 89.7 bits (98), Expect = 5e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 ||||| | ||||| ||||| ||||||| ||| | ||||| |||| ||||| | Sbjct 1026757 ATGCAGATCTTTGTGAAAACCCTAACCGGTAAAACCATCACTCTCGAGGTCGAGAGTTCC 1026698 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 ||||| ||||| | || || || || || || ||||| || || ||||||||| Sbjct 1026697 GATACCATCGATAATGTCAAGGCTAAGATCCAAGACAAGGAGGGCATCCCTCCCGATCAG 1026638 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 || | || || | || ||||||||||||||| || | | | | | |||||| || Sbjct 1026637 CAGCGCCTAATCTTCGCCGGCAAACAACTCGAGGACGGTCGGACCCTAGCCGATTATAAC 1026578 Query 25355 ATTCAAAAAGAATCCACCATTCAT 25378 ||||| || || |||||| | ||| Sbjct 1026577 ATTCAGAAGGAGTCCACCCTCCAT 1026554 >seq946 Length=5553863 Score = 82.4 bits (90), Expect = 7e-11 Identities = 106/145 (73%), Gaps = 1/145 (1%) Strand=Plus/Minus Query 25268 GATAAAGAGGGTATACCGCCCGATCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAA 25327 || ||||| ||||| || || |||||||| ||||| |||| | || || ||| | ||| Sbjct 333560 GAMAAAGAAGGTATTCCTCCTGATCAGCAGAGACTGATTTTTGCTGGTAAGCAATTGGAA 333501 Query 25328 GATGATAGAAATGTCAGCGATTACAATATTCAAAAAGAATCCACCATTCATTTAGTGTTA 25387 |||| | | | | ||| || ||||| ||||||||||| || |||| || || || Sbjct 333500 GATGGCCGTACTTTGGCCGACTATAATATCCAAAAAGAATCAACACTTCACTTGGTTTTG 333441 Query 25388 AGATTGAGAGGAGGAA-AATGATCA 25411 || | |||||||||| ||||||| Sbjct 333440 AGGCTCAGAGGAGGAACGATGATCA 333416 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445088953157280