Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhazya_20stricta_20[genbank_20GCA_5F001752375.1_202016-10-04] 979 sequences; 274,354,041 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq940 255 8e-62 >seq940 Length=8971605 Score = 255 bits (282), Expect = 8e-62 Identities = 387/543 (71%), Gaps = 12/543 (2%) Strand=Plus/Plus Query 1455734 AACCCGAACCGCTTTGTCCTGTTCCCCATCCGCTACCAGCGGATATGGGAAATGTACCAA 1455793 ||||| ||||||| | |||| || || | |||| | ||| ||||| |||||| | Sbjct 8502079 AACCCAGACCGCTTCTGCATGTTTCCAATTCAATACCCTCAGATTTGGGAGATGTACAAG 8502138 Query 1455794 AAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACCTCGGCGCCGACACGGTCCA 1455853 |||| | ||||||||||| ||||| |||||||||||||||||| | |||| | || Sbjct 8502139 AAAG-CAGAGGCCTCCTTCTGGACTGCCGAGGAGGTCGACCTCTCCCAGGACATGCGTCA 8502197 Query 1455854 CTGGGTGTCGCTGAGCGACGACGAGCGCCATTTCATCAAGCACGTCCTCGCCTTTTTTCG 1455913 |||| || | | |||||||| || || || | | ||| || || ||||| || Sbjct 8502198 ATGGGAAAACCTCACCCCTGACGAGCGTCACTTTATTAGTCGCGTTCTGGCATTTTT-CG 8502256 Query 1455914 CCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGCCGCTTTATGAAAGAGGTCCAAT 1455973 || || ||||||||||| ||||| || ||||| || || |||||||| || || Sbjct 8502257 CCMCCTCAGATGGCATCGTTTTGGAGAATCTCGCCGGACGATTCATGAAAGAAGTTCAGG 8502316 Query 1455974 TGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCCATCGAAAACATCCACTCTGAAA 1456033 | | ||||| ||| || ||||| ||||| || |||||||||||||| || || || | Sbjct 8502317 TCTCCGAGGCRCGTGCCTTCTACGGCTTCCAAATTGCCATCGAAAACATTCATTCCGAGA 8502376 Query 1456034 CCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCGGTCGAGAAGGACCACCTCTTTC 1456093 || ||| || |||| |||| | |||||||| | ||||||| || ||||||| Sbjct 8502377 TGTATAGRCTCTTGCTCGAGTCCTARATTAAGGACCCAGACGAGAAGCACAGGCTCTTTC 8502436 Query 1456094 GCGCCATCGACACGGTGCCGT-CGGTGAGGAAAAAGGCCGACTGGGCGATGAAGTGGATC 1456152 ||| || || || | || | || ||| || |||||| | ||||| | |||||| Sbjct 8502437 ACGCAATGGAGACCATACCTTGCGTTGA-AAAGAAGGCCAAGTGGGCCCTCCGATGGATC 8502495 Query 1456153 AACAAGGAGG-GCCTCGACACTTTGCCGAGCGGCTCGTCGGCTTTGC-CGCGTCGAGGGC 1456210 || || || | || ||||| ||||| | |||| |||||| |||||||||| Sbjct 8502496 GAC--GGCGGAGAATC----ATTTGCGGAGCGTTTGGTCGCCTTTGCTTGCGTCGAGGGG 8502549 Query 1456211 ATCTTTTTCTCGGGCAGTTTCTGCGCCATCTTTTGGCTCAAGAAGCGCGGCCTCATGCCC 1456270 || || |||||||| ||||| ||||| || |||||| | ||||| ||||| || |||||| Sbjct 8502550 ATATTCTTCTCGGGGAGTTTTTGCGCGATATTTTGGTTAAAGAAACGCGGGCTAATGCCC 8502609 Query 1456271 GGT 1456273 ||| Sbjct 8502610 GGT 8502612 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177716773650598