Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhazya_20stricta_20[genbank_20GCA_5F001752375.1_202016-10-04] 979 sequences; 274,354,041 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq940 134 1e-26 >seq940 Length=8971605 Score = 134 bits (148), Expect = 1e-26 Identities = 380/579 (66%), Gaps = 4/579 (1%) Strand=Plus/Plus Query 43707 TGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAGGCGTCATTTT 43766 |||||||||||||||| | | | || ||| | |||||||| |||||| |||| || || | Sbjct 8502098 TGTTTCCAATTCAATACCCTCAGATTTGGGAGATGTACAAGAAAGCAGAGGCCTCCTTCT 8502157 Query 43767 GGACAGCAGAAGAAGTTGATTTGACTAAAGACTTAGCACATTGGATTGCATTAAAACCAC 43826 |||| || || || || || | | | ||| | || ||| | | || Sbjct 8502158 GGACTGCCGAGGAGGTCGACCTCTCCCAGGACATGCGTCAATGGGAAAACCTCACCCCTG 8502217 Query 43827 AAGAAAAACATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGACGGGATAGTCA 43886 | || || ||||| | ||| |||| ||||| || | || || || || Sbjct 8502218 ACGAGCGTCACTTTATTAGTCGCGTTCTGGCATTTTTCGCCMCCTCAGATGGCATCGTTT 8502277 Query 43887 ATGAAAATTTGGTTAGTCGGTTTGCGCAAGAAGTTCAATTACCAGAAGCACGATGTTTTT 43946 || ||| | | | || || | |||||||||| | | || || || || | Sbjct 8502278 TGGAGAATCTCGCCGGACGATTCATGAAAGAAGTTCAGGTCTCCGAGGCRCGTGCCTTCT 8502337 Query 43947 ATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGATAGATA 44006 | || || ||||||||||| ||||| |||||||| || ||||| || || || | || Sbjct 8502338 ACGGCTTCCAAATTGCCATCGAAAACATTCATTCCGAGATGTATAGRCTCTTGCTCGAGT 8502397 Query 44007 CGTACATCAAAGATGGGCACGAGAAGCATCGATTGTTTAATGCGATAGAAACAGTACCT- 44065 | || || || || |||||||||| | | ||| | || || || || ||||| Sbjct 8502398 CCTARATTAAGGACCCAGACGAGAAGCACAGGCTCTTTCACGCAATGGAGACCATACCTT 8502457 Query 44066 GCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGATAAATTCAAATGATTCTTTTGGA 44125 ||| | ||| | || || | |||||||| |||||| | || || |||| Sbjct 8502458 GCGTTGAAA-AGAAGGCCAAGTGGGCCCTCCGATGGATCGACGGCGGAGAATCATTTGCG 8502516 Query 44126 GAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGG-ATCGTTTGCGGC 44184 || || | ||||| ||||| || || || || ||||| || || | |||||| | Sbjct 8502517 GAGCGTTTGGTCGCCTTTGCTTGCGTCGAGGGGATATTCTTCTCGGGGAGTTTTTGCG-C 8502575 Query 44185 CATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTAAT 44244 |||||||||||||||||||| || | ||||| || ||||| || || || |||||||| Sbjct 8502576 GATATTTTGGTTAAAGAAACGCGGGCTAATGCCCGGTTTGACCTTCTCGAACGAGTTAAT 8502635 Query 44245 AAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTT 44283 || ||||| || | ||||| || || || ||||| Sbjct 8502636 CTCGCGAGATGAGGGTCTCCATTGTGACTTCGCGTGCTT 8502674 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397451257728895