Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ricinus_20communis_20[refseq_20GCF_5F000151685.1_202011-07-07] 25,763 sequences; 350,621,860 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq25760 150 2e-31 >seq25760 Length=3792821 Score = 150 bits (166), Expect = 2e-31 Identities = 391/590 (66%), Gaps = 21/590 (4%) Strand=Plus/Plus Query 16958 ATCAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAAT 17017 |||| ||| ||||||||||| ||||| ||||| |||| ||| | ||||| |||||| Sbjct 707903 ATCAAACACGCGAAATCGCAGTGTAAGCCCTCATCTCGTGAGATTAACTCGTTTGAAAAT 707962 Query 17018 GTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAA 17077 |||| || ||||| || || || || | ||||||||||||| ||| ||||| Sbjct 707963 GTCAGACCCGGCATTAACCCACGCTTTTTAAGCCAAAATATCGCGCAGAAACTTCCAGAG 708022 Query 17078 AAGAATATACCCTCGACGGATGCAAACGCGATTAATCGT-TCGGC------GTACGTCGC 17130 ||||| || || || || | || || || | ||||| | || || | || | Sbjct 708023 AAGAAAATCCCTTCAACACAAGCGAAAGC-AATAATCCTCTCAGCAAAAGATTCCGAGCC 708081 Query 17131 GTCTTTGTTACGAATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGT 17190 |||| ||||||||| ||||||| ||||| | | ||||||| | ||| Sbjct 708082 GTCT---------ATCCATTTCAAAGCCCACTCCGCTTTCTTCGCTATGCAAGGAACCGT 708132 Query 17191 TTCTATGGCCTTAAATAATTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAG 17250 || || || | ||| || | ||||| | ||| | ||||| || || | | Sbjct 708133 CTCGATAGCGTGAAACAAACGGTTCTTTTCATTGGAGTCTTTGATATAAGTCTCCAACAA 708192 Query 17251 TAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTA-AAAGCATC 17309 || ||||||||| ||||| |||||||| || || || || || ||||| |||||| | Sbjct 708193 AAGAGAGTACATTTCAGAGTGGATGTTCTCAATAGCGATTTGGAAACCGTAGAAAGCA-C 708251 Query 17310 GGGCTTCCGCTATTTGAACTTC-CACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATG 17368 | || || || | |||||| || | || || || | || || ||||| ||||| Sbjct 708252 GCGCCTCAGCCACTTGAACCTCTTTCATA-AAACGGCCGGCGAGGTTTTCAAGGACGATA 708310 Query 17369 CCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATATTTTTCGTCCGGTGTA 17428 |||||| |||||||| || || | | || ||||| | ||||| || || || Sbjct 708311 CCGTCGGAGGCGGCGAAGAAGGCGAGGACGTGAGAGATGAAGTGCTTTTCATCGGGAGTT 708370 Query 17429 AGAACGCGCCAGTCCTTTAAATCTTTGGATATATCCACTTCTTCGGGGGTCCAAAAACTA 17488 || ||||| | ||||| || | ||||||||| || | |||||||| Sbjct 708371 AGGGATTCCCAGTGACGGAGATCTTGAGAGAGATCCACTTCCTCTGCCGTCCAAAATGAT 708430 Query 17489 GCCACTGCCTTTTTATACATATTCCAAATATCATTGTATTGTATGGGGAA 17538 || | || ||||| ||||| | |||||| || |||||| || ||||| Sbjct 708431 GCTTCGGCTTTTTTGTACATTTCCCAAATTTCTGGGTATTGGATTGGGAA 708480 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517378930908840