Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ricinus_20communis_20[refseq_20GCF_5F000151685.1_202011-07-07] 25,763 sequences; 350,621,860 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq25599 98.7 2e-15 >seq25599 Length=502261 Score = 98.7 bits (108), Expect = 2e-15 Identities = 157/219 (72%), Gaps = 6/219 (3%) Strand=Plus/Plus Query 248805 CAAAGATTTGGAGTACGATTTCTTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAA 248864 || |||||| || || |||| ||||| |||||||| || |||| || || || | || Sbjct 181736 CAGAGATTTTGACTATGATTACTTTGGCTTCAAAACTCTTGAGAGGTCCTACCTTTTGAA 181795 Query 248865 AATTGATGGCAAGATCGTGGAACGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGAT 248924 |||||||| ||||| || ||| || || |||||||||||| | || ||| | || || Sbjct 181796 GATTGATGGGAAGATTGTAGAAAGACCACAACACATGTTGATGAGGGTTGCTATTGGTAT 181855 Query 248925 TCACAAGGATGACATAGAGAGCGTGC--TCGAGACGTA-CACCGGAATGAGTGAACGCTG 248981 ||||| |||||| | || | | ||| | | || || ||| | ||| | |||| || Sbjct 181856 CCACAAAGATGACGTTGA-ATC-TGCTGTTAAAACATATCACTTG-ATGGCTCAACGATG 181912 Query 248982 GATGACACATGCCACACCGACGCTCTTCAACGCCGGTAC 249020 | | |||||||| || || || || ||||| || || || Sbjct 181913 GTTCACACATGCTACCCCTACTCTTTTCAATGCAGGAAC 181951 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073411962126784