Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ricinus_20communis_20[refseq_20GCF_5F000151685.1_202011-07-07] 25,763 sequences; 350,621,860 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq25760 131 2e-25 >seq25760 Length=3792821 Score = 131 bits (144), Expect = 2e-25 Identities = 382/577 (66%), Gaps = 25/577 (4%) Strand=Plus/Plus Query 14196 AAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAA 14255 |||| |||||||| ||||| || || | ||||||||||| || | |||||||||| Sbjct 707901 AAATCAAACACGCGAAATCGCAGTGTAAGCCCTCATCTCGTGAGATTAACTCGTTTGAAA 707960 Query 14256 ATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGG 14315 |||| | || ||||| || || || ||||| | ||||||||| || ||| ||| | Sbjct 707961 ATGTCAGACCCGGCATTAACCCACGCTTTTTAAGCCAAAATATCGCGCAGAAACTTCCAG 708020 Query 14316 AAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGT-TCTCCAAACGATGCTTTT 14374 | ||||| || || ||||| ||| || || | ||||| | || |||| ||| | Sbjct 708021 AGAAGAAAATCCCTTCAACACAAGCGAAAGC-AATAATCCTCTCAGCAAAAGATTCCGAG 708079 Query 14375 TTGTTCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCA 14434 || ||||||||| |||||| || | ||| || || || | || || Sbjct 708080 CCGT---CTATCCATTTCAAAGCCCACTCCGCTTTCTTCGCTATGCAAGGAACCGTCTCG 708136 Query 14435 ATAGCATTAAATAAATGTTCCTTCTCTTT--AGTACTTGAAAT--GTATGTATCAATAAG 14490 ||||| | ||| ||| | | ||| || || ||| |||| || || | | ||| ||| Sbjct 708137 ATAGCGTGAAACAAACGGTTCTTTTCATTGGAGTCTTTGATATAAGTCTCCAACAA-AAG 708195 Query 14491 TAAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCT 14550 || |||||||||||||| ||||| || ||||| || || ||||| || ||| | Sbjct 708196 AGAG---TACATTTCAGAGTGGATGTTCTCAATAGCGATTTGGAAACCGTAGAAAGCACG 708252 Query 14551 AGCTTCTGACCATTGTACCTCTGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACC 14610 || || | | ||| |||||| ||| | |||| | |||||| || ||||| Sbjct 708253 CGCCTCAGCCACTTGAACCTCTTTCATAAAACGGCCGGCGAGGTTTTCAAGGACGATACC 708312 Query 14611 ATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGCTGAG 14670 || || || || || || | | || || ||| |||| ||||| | ||| Sbjct 708313 GTCGGAGGCGGCGAAGAAGGCGAGGACGTGAGAGATGAAG---TGCTTTTCATCG-GGAG 708368 Query 14671 TT----TTTTCCAAT--CGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAA 14724 || || ||| | ||| | ||| | ||| ||||| ||||| || | |||||||| Sbjct 708369 TTAGGGATTCCCAGTGACGG--AGATCTTGAGAGAGATCCACTTCCTCTGCCGTCCAAAA 708426 Query 14725 ACTAGCAACAGCTTTTTTATACATTACCCATATTTCT 14761 || | |||||||| |||||| |||| |||||| Sbjct 708427 TGATGCTTCGGCTTTTTTGTACATTTCCCAAATTTCT 708463 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482190266628840