Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ricinus_20communis_20[refseq_20GCF_5F000151685.1_202011-07-07] 25,763 sequences; 350,621,860 total letters Query= NC_004813.1 Length=57930 Score E Sequences producing significant alignments: (Bits) Value seq16533 96.9 1e-15 >seq16533 Length=1266 Score = 96.9 bits (106), Expect = 1e-15 Identities = 175/251 (70%), Gaps = 4/251 (2%) Strand=Plus/Minus Query 29532 GAAGCCGGGATCCCCGACGGAATTGTTG-TGGGGATAAGCCAGGGCTGGAAGCTGGGCGG 29590 || |||||||||||||| ||||||| | | || || ||||||||||||||| || Sbjct 332 GACGCCGGGATCCCCGA-GGAATTGATCATCGGCATCTCCCAGGGCTGGAAGCTCACGGG 274 Query 29591 GGCCATAAAAACCACCGAGCGCAAACTGGCTGA-GGGAGTACTGGTGCATGGTGGTCAGC 29649 ||||| | | |||||| |||| || ||||| || || | | |||| Sbjct 273 CGCCATGGCCGTCGCAGAGCGCGGCCTGGAGGACGGGAGC-CTCACCCACGCCGCGCAGC 215 Query 29650 CACTGATGGCCTGGTGCGTTGGCAATGCCCGGGTGGAGCCTAAAGGTAACGCCATTCTTA 29709 | || |||||||||||||| ||||| || ||| ||||| || || || ||| || | Sbjct 214 CGCTCATGGCCTGGTGCGTGGGCAACGCGAAGGTAGAGCCCAAGGGCAATGCCTCGCTGA 155 Query 29710 TTACCAAACAGGCCAGCGGACGGGGGAAAATTGACCCGCTGATGGCGCTCTTCAATGCGG 29769 |||| ||||| |||||||| | || || || ||||| |||||| |||| |||| Sbjct 154 TTACGAAACAAGCCAGCGGCTCCGCAAAGATCGATCCGCTCATGGCGTCGCTCAACGCGG 95 Query 29770 TATCCCTGATG 29780 | | |||||| Sbjct 94 TGACGCTGATG 84 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 185197724079352