Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ricinus_20communis_20[refseq_20GCF_5F000151685.1_202011-07-07] 25,763 sequences; 350,621,860 total letters Query= NC_005294.1 Length=42935 Score E Sequences producing significant alignments: (Bits) Value seq20225 91.5 4e-14 >seq20225 Length=1569 Score = 91.5 bits (100), Expect = 4e-14 Identities = 131/185 (71%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 9106 GAAATGCGAGAACATCCAGACTTCAAGCAGTTCATTGATAACCCAACTCATAAGATTGTA 9165 |||||||| || ||||||||||| || ||||| | || ||||| |||| || ||| Sbjct 1568 GAAATGCGTGATCATCCAGACTTTAAACAGTTTGTATTAAATCCAACGCATAGAATCGTA 1509 Query 9166 TTTATCGACTACGAAGGATTTCGCATGTTCGTCAAATGGAAAAGTCGTAATCGCTATCGT 9225 || || || ||| ||||||| |||| || | |||||| ||| ||||| || Sbjct 1508 TTCATTGATTACAAAGGATTCAAACTGTTTGTACAGTGGAAATCTCGCAATCGTTACAAA 1449 Query 9226 ACGAAGAAAGAAACTTTAGCTGAAATGCTTGAGAATATCAAGAAAGAAAAACAATTAGGA 9285 || || ||||| || | | ||||||||||| ||||| || |||||| | ||||| Sbjct 1448 ACAAAAAAAGAGACACTGCCAGAAATGCTTGAAAATATTAAATTTGAAAAAAGAGTAGGA 1389 Query 9286 ATATA 9290 |||| Sbjct 1388 GTATA 1384 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 137228404094382