Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ricinus_20communis_20[refseq_20GCF_5F000151685.1_202011-07-07] 25,763 sequences; 350,621,860 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq25760 111 3e-19 >seq25760 Length=3792821 Score = 111 bits (122), Expect = 3e-19 Identities = 179/255 (70%), Gaps = 2/255 (1%) Strand=Plus/Minus Query 42423 CTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCATG 42482 || ||||||||||||||||| ||||| || ||| ||| ||||| ||| | | || ||| Sbjct 708336 CTCGCCTTCTTCGCCGCCTCCGACGGTATCGTCCTTGAAAACCTCGCCGGCCGTTTTATG 708277 Query 42483 AAAGAGGTGCAGTACTTTGAGGCGCGCTGC-TTCTACGGCTTCCAGATAGCCATAGAGAA 42541 |||||||| || ||||||||| ||| |||||||| ||||| || || || ||||| Sbjct 708276 AAAGAGGTTCAAGTGGCTGAGGCGCG-TGCTTTCTACGGTTTCCAAATCGCTATTGAGAA 708218 Query 42542 CGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGTCGAGCG 42601 | | |||||||| ||||| | || | | || || ||| || || || Sbjct 708217 CATCCACTCTGAAATGTACTCTCTTTTGTTGGAGACTTATATCAAAGACTCCAATGAAAA 708158 Query 42602 TAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGC 42661 ||| | |||| | || || |||||| | || ||||| |||||| ||||| ||||| Sbjct 708157 GAACCGTTTGTTTCACGCTATCGAGACGGTTCCTTGCATAGCGAAGAAAGCGGAGTGGGC 708098 Query 42662 GCTCAACTGGATCGA 42676 | || ||||| || Sbjct 708097 TTTGAAATGGATAGA 708083 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944035087364880