Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ricinus_20communis_20[refseq_20GCF_5F000151685.1_202011-07-07] 25,763 sequences; 350,621,860 total letters Query= NC_009819.1 Length=40539 Score E Sequences producing significant alignments: (Bits) Value seq20225 185 2e-42 >seq20225 Length=1569 Score = 185 bits (204), Expect = 2e-42 Identities = 138/162 (85%), Gaps = 0/162 (0%) Strand=Plus/Minus Query 4186 GGAGTATAACATGAACAAACTAGAATTATTTTTATTAGCGACAACAATCGTCTTAGCAAT 4245 ||||||||||||||||||| ||||||||||||| ||||| ||||| | ||||||| | Sbjct 1391 GGAGTATAACATGAACAAATTAGAATTATTTTTGTTAGCAACAACCGTTATCTTAGCGGT 1332 Query 4246 CATCGCTAGGGTGCAATATGAAATTATTAAAAAACATAACTCACCCGAGAATAAGCGAAA 4305 ||| |||||||||||| | ||| | ||||||||||| || || || ||||||||||| || Sbjct 1331 CATTGCTAGGGTGCAACACGAAGTCATTAAAAAACACAATTCGCCAGAGAATAAGCGGAA 1272 Query 4306 AATTTTTAGGGAAGTGGCTTTAGAAAACAGCAAGAAATGGAG 4347 ||||||||||||||| |||||| |||||||||| |||||| Sbjct 1271 AATTTTTAGGGAAGTAGCTTTAAAAAACAGCAAAGGATGGAG 1230 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 129563549764006