Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ricinus_20communis_20[refseq_20GCF_5F000151685.1_202011-07-07] 25,763 sequences; 350,621,860 total letters Query= NC_011357.1 Length=62147 Score E Sequences producing significant alignments: (Bits) Value seq16533 89.7 2e-13 >seq16533 Length=1266 Score = 89.7 bits (98), Expect = 2e-13 Identities = 182/268 (68%), Gaps = 2/268 (1%) Strand=Plus/Minus Query 36187 GAAGCCGGGATCCCCGACGGAATTG-TGGTGGGGATAAGCCAGGGCTGGAAACTGGGCGG 36245 || |||||||||||||| ||||||| | | || || |||||||||||| || || Sbjct 332 GACGCCGGGATCCCCGA-GGAATTGATCATCGGCATCTCCCAGGGCTGGAAGCTCACGGG 274 Query 36246 GGCCATTAAAACCACCGAGCGCAAACTGGCTGAAGGGGTGCTGGTGCATGGTGACCAGCC 36305 ||||| | | |||||| |||| || ||| || || | | ||||| Sbjct 273 CGCCATGGCCGTCGCAGAGCGCGGCCTGGAGGACGGGAGCCTCACCCACGCCGCGCAGCC 214 Query 36306 CCTGATGGCCTGGTGTGTCGGCAATGCCCGGGTGGAGCCTAAAGGTAACGCCATTCTTAT 36365 || ||||||||||| || ||||| || ||| ||||| || || || ||| || || Sbjct 213 GCTCATGGCCTGGTGCGTGGGCAACGCGAAGGTAGAGCCCAAGGGCAATGCCTCGCTGAT 154 Query 36366 CACCAAACAGGCCAGTGGACGGGGAAAAATTGACCCGCTGATGGCGCTGTTCAATGCGGT 36425 || ||||| ||||| || | ||| || || ||||| |||||| | |||| ||||| Sbjct 153 TACGAAACAAGCCAGCGGCTCCGCAAAGATCGATCCGCTCATGGCGTCGCTCAACGCGGT 94 Query 36426 CTCCCTGATGTCCCTTAACCCGGAACCG 36453 | |||||| | |||||| || || Sbjct 93 GACGCTGATGGCGACCAACCCGCAAGCG 66 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 198687995661654