Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ricinus_20communis_20[refseq_20GCF_5F000151685.1_202011-07-07] 25,763 sequences; 350,621,860 total letters Query= NC_015266.1 Length=40555 Score E Sequences producing significant alignments: (Bits) Value seq23209 452 1e-122 >seq23209 Length=2863 Score = 452 bits (500), Expect = 1e-122 Identities = 602/833 (72%), Gaps = 20/833 (2%) Strand=Plus/Plus Query 35648 CCGGCAAGCGCAGATCGTCCCATGAGAAGCCGGTCTTCTTCCGGAATCCGACGATGACGA 35707 |||||| ||||||||||||||| ||||| ||||| || || |||||||||| || Sbjct 2 CCGGCAGGCGCAGATCGTCCCAGGAGAACGATGTCTTGCCGCGAAACCCGACGATGATGA 61 Query 35708 TTCGCTCACGATGCTGAGGGGTGAAGTGCTGGCCGTCGATGATCTTGTAATGGACGTCAT 35767 | ||||| |||||||| || ||||| ||| |||||||| | |||||| || || | Sbjct 62 TCCGCTCGCGATGCTGCGGCGTGAAATGCGCACCGTCGATCACGCGGTAATGCACCTCGT 121 Query 35768 ACTGGAGCTCGTCACGCAACGTTTGCAAGATAACGGCAAAAGTGTTGCCTTTATCGTGCG 35827 | ||| ||||| |||| ||| || | ||| ||| | || ||| |||||| ||||||| Sbjct 122 AGCCGAGTTCGTCGCGCAGCGTCTGAAGGATCACGTCGAACGTGCGGCCTTTGTCGTGCG 181 Query 35828 ACAACAAATTCTTCACGTTTTCCAACACGAAGGCCGCAGGTCGCTTCGCTGCGATGATCC 35887 ||| | |||||||||||||| | || ||| || || || || || || ||||| | Sbjct 182 ACAGGAGGTTCTTCACGTTTTCGAGCAGGAACGCGGCCGGGCGGCGCGTGGCAATGATGC 241 Query 35888 GGGCTACGTCGAAAAATAGAGTGCCCTGAGTAGTGCACTCGAAGCCGTGCGGGCGGCCCA 35947 | || || ||||| || || |||||||| || ||||| ||||| |||||||| || || | Sbjct 242 GCGCGACATCGAAGAACAGCGTGCCCTGCGTCGTGCATTCGAAACCGTGCGGACGCCCTA 301 Query 35948 GTGAGTTCTTTTTGCTTACTCCCGCGATACTAAACGGCTGGCAAGGGAAGCCGGCAAGCA 36007 | | ||||| ||||| || || ||||| ||||||||| || || |||||| | |||| Sbjct 302 GCGCATTCTTCTTGCTGACGCCGGCGATTGAAAACGGCTGACACGGAAAGCCGCCGAGCA 361 Query 36008 AGACGTCATGAGTTGGCACACTTTCGGCCGCGAATGGGACGATGTCACCGATGAAAGGAT 36067 | ||| || || || ||||| | || | ||||||||| ||||| | | | Sbjct 362 GAATGTCGTGCTCGGGGACGGCCTCGGCGGGAAACGTGACGATGTCGCCGATCAGCGCGT 421 Query 36068 GATG---------GTCGCCGAAGTTATCGACGTACGTCTTCTTCGAAAAGTCGTTCCACT 36118 | || ||||| ||| || || ||||| |||| ||| ||||||||||||| Sbjct 422 GCTGCGCGGTGCCGTCGCGGAAATTCTCCTGATACGTTTTCTGCGAGAAGTCGTTCCACT 481 Query 36119 CGCTAGTGAATACGCATTCACCGCCATGAGCCTCAAAACCAAGGCGAATGCCACCGATTC 36178 |||| ||||| ||||||| |||||||| ||||| || || | || ||||| ||||| | Sbjct 482 CGCTGGTGAACACGCATTGGCCGCCATGCGCCTCGAAGCCCATCCGGATGCCGCCGATGC 541 Query 36179 CGGCGAACAGATCGATGAAACG-GAATCGGTT--GTTGGCCGCACTCGTGCCACTCGGT- 36234 |||| ||||||||||||| || | | ||| |||| | || || ||| || | Sbjct 542 CGGCAAACAGATCGATGATGCGCGTGCCAGTTCCGTTGCCTGCGTGCGCGCC-GGCGTTT 600 Query 36235 --TGC----GCGGTCTCCAGCATATCGCGCAATGCGGGTTCCAACATGGCTGGACAGGGC 36288 ||| |||| | |||||| || |||| || ||||| | ||| || || |||||| Sbjct 601 CGTGCCGTGGCGGGATACAGCATGGCGTGCAACGCCGGTTCGAGCATCGCGGGGCAGGGC 660 Query 36289 GTTTCGCCCTTTTCCCAGCGCCGAACGGTCTTTGCGTCCTTGCCGACGTGTTCGGCGATC 36348 |||||||||||||||||||| || || ||||| |||||||||||| || ||||||| Sbjct 661 GTTTCGCCCTTTTCCCAGCGGCGCACCGTCTTGATGTCCTTGCCGACATGCGCGGCGATT 720 Query 36349 TCGCGCTGCGTGAAGCGGCTGCGGGCCTGTTTCAATAGTTCGAGTGGCTGGGCCTGGGTC 36408 || || ||||||||| |||| ||||| ||||| || || || || ||||| ||| Sbjct 721 TCTTTTTGTGTGAAGCGGGTGCGCGCCTGCTTCAACAGGTCAAGCGGTGAAGCCTGAGTC 780 Query 36409 ATATTTGCTCTCGCTGGGAATCTCAGCGGACATTTTGACCTTTAAACGTCCCT 36461 | | || ||||||||| | ||||||||| |||||| || |||||| Sbjct 781 ACAGGAATCCTTGCTGGGAATTTTTGCGGACATTATGACCTACGAATGTCCCT 833 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 129614734100102