Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ricinus_20communis_20[refseq_20GCF_5F000151685.1_202011-07-07] 25,763 sequences; 350,621,860 total letters Query= NC_020205.1 Length=42963 Score E Sequences producing significant alignments: (Bits) Value seq16098 98.7 3e-16 seq7934 86.0 2e-12 >seq16098 Length=1243 Score = 98.7 bits (108), Expect = 3e-16 Identities = 95/122 (78%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 906 GCCGGCTAACGTGTGGCTGGGCGCGACGATCTGCAACCAGGCCGAAGCCGACCGCGACAT 965 |||| | || || ||||| |||||||| ||| ||| || ||||||||||||| ||||| Sbjct 298 GCCGTCCAATGTTTGGCTCGGCGCGACAATCGTCAATCAAACCGAAGCCGACCGGGACAT 239 Query 966 CCCGAAGCTGCTGGCCACGCGCGCGGCGGTCAAGTTCCTGTCGATGGAACCGCTGCTGGG 1025 ||| || ||| | | ||| | ||||| | ||||||||| |||||||||||||| || Sbjct 238 CCCAAAACTGATCGACACACCGGCGGCCAGCCGGTTCCTGTCAATGGAACCGCTGCTCGG 179 Query 1026 TG 1027 || Sbjct 178 TG 177 >seq7934 Length=986 Score = 86.0 bits (94), Expect = 2e-12 Identities = 93/121 (77%), Gaps = 2/121 (2%) Strand=Plus/Plus Query 1145 TCGTAGGTGGCGAAAGCGGCCATGGCGCCAGGCCCATGAACCCTACGTGGGCGCGATTCC 1204 |||| || || |||||||||| ||||| | || ||| | || |||||||||||| | Sbjct 97 TCGTCGGCGGTGAAAGCGGCCGCGGCGCGCGCCCAATGCATCCATCGTGGGCGCGATCGC 156 Query 1205 TGCGCGATCAGTGCGAAGCCGCTGGCGT-GCCTTTCCTGTTCAAGCAGTGGGGCGAATGG 1263 | |||||||| || | || ||||| | ||||||| | |||||||| |||||||| ||| Sbjct 157 TACGCGATCAATGTGCGGCAGCTGGTATCGCCTTTCAT-TTCAAGCAATGGGGCGAGTGG 215 Query 1264 G 1264 | Sbjct 216 G 216 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 137317976682550