Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ricinus_20communis_20[refseq_20GCF_5F000151685.1_202011-07-07] 25,763 sequences; 350,621,860 total letters Query= NC_026430.1 Length=125767 Score E Sequences producing significant alignments: (Bits) Value seq25706 89.7 4e-13 >seq25706 Length=1095516 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 ||||||||||||||||| || ||||| || |||||||||||| |||| |||| | | Sbjct 699377 ATGCAAATTTTTGTTAAGACCTTGACGGGAAAGACCATTACCTTGGAGGTAGAAAGCAGT 699318 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 || | | | | || || || ||| ||||||||||| | || ||||| Sbjct 699317 GACACAATCGATAATGTCAAGGCGAAGATTCAAGACAAAGAAGGGATTCCACCAGATCAG 699258 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 || ||| | |||| || || || || | |||||| | ||| ||| ||||| ||| Sbjct 699257 CAGAGGTTGATTTTCGCAGGAAAGCAGCTTGAAGATGGAAGGACTTTGGCTGATTATAAC 699198 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486 || || || ||||| ||||| || | || || ||| | || ||||| Sbjct 699197 ATTCAGAAGGAATCAACACTTCACCTTGTGTTAAGGCTTCGTGGAGG 699151 Score = 87.8 bits (96), Expect = 1e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 ||||| || || || ||||| ||||| || ||||||||||| | ||| || | || Sbjct 699605 ATGCAGATCTTCGTCAAAACCTTGACGGGAAAGACCATTACTCTTGAAGTTGAGAGCAGC 699546 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 || || ||| | || || ||| ||| ||||||||||| | ||| ||||| Sbjct 699545 GACACTATTGATAATGTCAAGGCAAAGATTCAGGACAAAGAAGGAATTCCCCCAGATCAG 699486 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 |||||||| || | ||| || ||||| | |||||| ||| ||| ||||| || Sbjct 699485 CAAAGGCTAATCTTTGCTGGAAAACAGCTTGAAGATGGGCGTACTTTGGCTGATTATAAT 699426 Query 106440 ATACAAAAAGAATCTACACTACA 106462 || || |||||||| ||||| || Sbjct 699425 ATCCAGAAAGAATCAACACTTCA 699403 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 402203273911904