Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ricinus_20communis_20[refseq_20GCF_5F000151685.1_202011-07-07] 25,763 sequences; 350,621,860 total letters Query= NC_028700.1 Length=37976 Score E Sequences producing significant alignments: (Bits) Value seq13672 535 1e-147 >seq13672 Length=1125 Score = 535 bits (592), Expect = 1e-147 Identities = 415/490 (85%), Gaps = 3/490 (1%) Strand=Plus/Minus Query 2030 AACTTCCAACGACTTCACCAATAATTCTAAAGTCGCTATCTCTATCTATCAGTATATCTT 2089 |||| |||| ||||| || ||||| | || || |||||||||||||| |||||||| | Sbjct 739 AACTCCCAATAACTTCTCCGATAATACGGAAATCACTATCTCTATCTATGAGTATATCGT 680 Query 2090 CATACTTGCTATTTAAACTGTGCAGAAATGCCCCCTCGTCATTTATAAGTAGCTGTTTGA 2149 |||||||| || | ||| ||||||||||| || || ||||||| || ||||||| Sbjct 679 CATACTTGTCGTTCAGACTATGCAGAAATGCTCCAGAATCGTTTATAACAAGTTGTTTGA 620 Query 2150 TATAAGCGTCACCATAGTATTCAAAGACGCCTATATCGCCATCTGTAAGCTCTACGGATA 2209 ||||||| ||||| || || ||||| || |||||||| ||||||| || | | |||| Sbjct 619 TATAAGCATCACCGTAATACTCAAAAACTCCTATATCACCATCTGACAGGTTAATAGATA 560 Query 2210 GCTTAACAAATACATAATCCCCAGAGTGATACTTCGGTTCCATGGAATCACCATAAACAG 2269 | || | ||||||||| |||||||| || || | |||||||| ||||| |||||||| | Sbjct 559 GTTTGATAAATACATAGTCCCCAGAATGGTATTCGGGTTCCATAGAATCGCCATAAACCG 500 Query 2270 GGATAACAAAGTCTGCGTCATAATCGACTGGTAACTCAATTTTTTCTACTTGTACATCAT 2329 | || ||||| || ||||| |||||||||||||| |||||| |||||||||||||||||| Sbjct 499 GTATGACAAAATCAGCGTCGTAATCGACTGGTAATTCAATTGTTTCTACTTGTACATCAT 440 Query 2330 TTAGATACTGACCTGTACCAGCTGAAGCTGCGTGGTCGTAGTAATTGCTAGGTGTAGTAG 2389 ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| Sbjct 439 TTAGATACTGACCTGTACCAGCTGAAGCTGCGTGGTCGTAGTAATTG-TAAGTGTAGTAG 381 Query 2390 GTGGCTTGTGGTTCTTCCTACCTGTGTTTTGTTGTTCTAATTGTGTTTCGGCATAATCAA 2449 |||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||||| Sbjct 380 GTGGCTTGTGGTTCTT-CTA-CTGTGTTTTGTTGTTCTAATTGTGTTTCAGCATAATCAA 323 Query 2450 GCACGTTTAGTTGTCGCTTGTGTTCTAATTGAGAAGAAGTAGAGTTTATTTTTTGTAGGG 2509 | ||||||| ||||||||||||||||| ||||| ||||||| ||| ||||||||||| Sbjct 322 GGACGTTTAATTGTCGCTTGTGTTCTAGCTGAGATAAAGTAGATGTTACTTTTTGTAGGG 263 Query 2510 TAGATGGGAT 2519 | |||||||| Sbjct 262 TTGATGGGAT 253 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 121364458925628