Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ricinus_20communis_20[refseq_20GCF_5F000151685.1_202011-07-07] 25,763 sequences; 350,621,860 total letters Query= NC_030909.1 Length=50183 Score E Sequences producing significant alignments: (Bits) Value seq21231 131 5e-26 >seq21231 Length=1712 Score = 131 bits (144), Expect = 5e-26 Identities = 272/391 (70%), Gaps = 22/391 (6%) Strand=Plus/Minus Query 33423 ACGCCTGGCGTTTCGCCGTAGCGCTTCCCCACCACCGCCTTCACGACCTGGACATCGTCC 33482 ||||| ||| | ||| ||||||||||| | | | | | ||||||||| |||||||| Sbjct 1625 ACGCCCGGCACTGCGCTGTAGCGCTTCCGCTTCGTCACATCCACGACCTGCACATCGTCG 1566 Query 33483 TTCCAGACAACGCCGTTCAGGCCGTCGTAGATCGCTTTGATCACGTTGTCCATATCGGGC 33542 ||||| || || ||||||| ||||||| | ||||| || |||||||| || |||||| Sbjct 1565 TTCCACACCACACCGTTCAAGCCGTCGAAAATCGCCTTCTCGACGTTGTCGATGTCGGGC 1506 Query 33543 TTCTTGGTGGG--GTACAGGCCG-CCGGCCAGCGCCAGCGACTTCCGCTTT---TTCGAC 33596 |||||||| || ||| || | ||| |||||||| ||| ||| ||||| |||||| Sbjct 1505 TTCTTGGTCGGCAGTA---GCTGTCCGTCCAGCGCC-GCG--TTCTGCTTTCGCTTCGAC 1452 Query 33597 ATCGATTG--AGGGA-TGCTCAGCGCGATGTCGAGCTCGACCAGCACTGGGCCCTCGAAC 33653 | | || ||| | | |||| |||||| |||| || ||| | || | | | Sbjct 1451 --CAACTGGCAGGCACCGGCAAGCG-GATGTCCAGCTGCACACTCACCGCACCGGCAATC 1395 Query 33654 AGCGCGCGACCTGCCATGGCCTGCTGTCCGCTGTGCGCAATCAACCCCTCGTAGTTCGCC 33713 || |||| || ||| ||| || ||| |||||| | | || |||||| | || Sbjct 1394 AGGTCGCGTCCGTTCATCGCCACGTGACCGGCGTGCGCTACAAGGCCTTCGTAGCTGGCG 1335 Query 33714 GTCTTCGCCGGAGTGAACATCCTGGCGTGGGCGCCGACACGACCGATACGC--GGCCTCC 33771 |||||| |||| ||| | | | || ||| |||| | | || | ||| |||| || Sbjct 1334 GTCTTCTCCGGGGTGTAGAGCGTGATGTGCTTGCCG-CGC-TTCGCTGCGCGGGGCCGCC 1277 Query 33772 CCTTCCCCACCGGCTCGCCGGGTACGGTGAA 33802 ||||||| || || || ||||| || ||||| Sbjct 1276 CCTTCCCGACGGGGTCACCGGGCACTGTGAA 1246 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 160414908345870