Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ricinus_20communis_20[refseq_20GCF_5F000151685.1_202011-07-07] 25,763 sequences; 350,621,860 total letters Query= NC_030940.1 Length=32637 Score E Sequences producing significant alignments: (Bits) Value seq22473 129 1e-25 >seq22473 Length=2097 Score = 129 bits (142), Expect = 1e-25 Identities = 255/369 (69%), Gaps = 15/369 (4%) Strand=Plus/Plus Query 572 GGTACGGGCAACCTAGGTGAACTGCTGATAAACACCGTAAGGATTGACGAGCCAAAGCTG 631 |||||| |||| || ||||||| | | | ||| ||| | || || ||||||| || Sbjct 1608 GGTACGACCAACATATGTGAACTTCAGTTTAACGTCGTGATCTTTAACAAGCCAAACGTG 1667 Query 632 CTGACAGGCTCGAACCAAAA-GGTACGTGGTCGGTTAT---CTCCGTAGGTCGTGGAGAT 687 |||||||||| ||||||||| |||||| ||| | || || || || |||| Sbjct 1668 CTGACAGGCTTGAACCAAAACGGTACGCGGTGAGGAATGGTCTTCGAAGAC--TGGACCA 1725 Query 688 ACGTCGCCTTCAG-ACCACCGGTGAAAAGGCAGGTCCTAACCCAGTCGTGTGACAGTCAG 746 | | | | | ||| |||| ||| | ||| | | ||| ||| || | ||| Sbjct 1726 TCATGGACAGGACCACCGCCGGCGAAGCAGAAGGGTCCACCCCGCTCG---GAAACTCAT 1782 Query 747 G--GAACGTGGTAAGCCCGTATCGCCGCCCTCGG-GGCAGGGGAGCCGTAAGGCGAACTG 803 | |||| |||||| || || | |||| | |||||| || ||| |||| ||| Sbjct 1783 GCGGAACAGGGTAAGTCCATAGTGTCGCCAGCAATGGCAGGCGAACCGCAAGGAACGCTG 1842 Query 804 TTGGCGGTGCGGGTATGGGATCGCAGAGAAAGCGAACGCCAGGCTGTAATCGTCTGGATA 863 |||||| || ||||| ||| || ||||||||||| ||| ||||||||| | | ||||| Sbjct 1843 TTGGCGCTGTGGGTAAAGGAATGCGGAGAAAGCGAATGCCCGGCTGTAATGGACGGGATA 1902 Query 864 GGGGTTGGAACATCACCCCACGGGAAACCGGGCAGACTTCTGCGTGGTCTTTCGTCGCAA 923 ||| || ||||| ||| ||| |||| |||||||||||| || |||| ||| | || Sbjct 1903 CGGGCTGAGACATCGCCCGACGCGAAAGCGGGCAGACTTCCGCACGGTCATTCATGGC-- 1960 Query 924 GAACTCTGA 932 ||||| ||| Sbjct 1961 GAACTTTGA 1969 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 104284885774594