Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ricinus_20communis_20[refseq_20GCF_5F000151685.1_202011-07-07] 25,763 sequences; 350,621,860 total letters Query= NC_031048.1 Length=41918 Score E Sequences producing significant alignments: (Bits) Value seq21478 107 5e-19 >seq21478 Length=1757 Score = 107 bits (118), Expect = 5e-19 Identities = 201/294 (68%), Gaps = 6/294 (2%) Strand=Plus/Minus Query 26926 GATTTCAGTGGTGTAGCGCTCAACGCCTTGCTGATCAGTCCATTTACGGGTTCGCAGACC 26985 ||| || ||| |||||||| || || | | || |||||| || ||| ||| || Sbjct 1587 GATCTCTGTGCTGTAGCGCGTTACACCGTCTTTTTC---CCATTTGCGTGTTTGCAAACG 1531 Query 26986 GCCTTCAATGAACACCTTGCTGCCTTTGCGCAGGTATTCACCAGCGATTTCCGCCAGCTT 27045 |||||| | ||||| || |||||| |||||||||||| |||||||| || | Sbjct 1530 GCCTTCCACATACACCGGGCGGCCTTTTTTCAGGTATTCACCGGCGATTTCAGCTAAACG 1471 Query 27046 GCCGAAGATGACAACGCGGTGCCATTCCGTCTGCTCTTTTGGTTCGCCTGTGGCCTTATC 27105 || | ||||||| | |||||||| || | || | | |||| | || || Sbjct 1470 GCGATACATGACAATGTTATGCCATTCGGTTTTTTCCTGGCGCACGCCAGAT---TTGTC 1414 Query 27106 TTTCCACTTTTCGGTTGTGGCAATGCTGAGATTGGCAACTGCGCCACCTGACGGCATGTA 27165 |||||| |||||||| ||||| ||||||| || || ||||| |||| ||||| || Sbjct 1413 TTTCCAGTTTTCGGTGGTGGCGATGCTGAAGTTAGCTACTGCCTCACCGTTTGGCATATA 1354 Query 27166 GCGCACTTCTGGATCGTTGCCTAAATTACCGATTAACTGCACCTGGTTTAATGA 27219 ||||||||| || || || | |||||| || || ||| | ||| | ||| Sbjct 1353 GCGCACTTCCGGGTCACGCCCCAGATTACCCATCAAAATCACTTTGTTGACTGA 1300 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 133974999731280