Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ricinus_20communis_20[refseq_20GCF_5F000151685.1_202011-07-07] 25,763 sequences; 350,621,860 total letters Query= NC_031129.1 Length=103445 Score E Sequences producing significant alignments: (Bits) Value seq21634 116 2e-21 >seq21634 Length=1792 Score = 116 bits (128), Expect = 2e-21 Identities = 421/638 (66%), Gaps = 32/638 (5%) Strand=Plus/Plus Query 58772 CGATCCCTGATTTCCCCAAGGCGGTTGAAGAACACCGCCCTGGCCAGCGAGTTGCGCGCC 58831 ||||||| |||||| || |||||| |||| | || | || | || | | ||| Sbjct 872 CGATCCCGGATTTCACCTCGGCGGTGGAAGCTGATGGCGCGCTTTAGGGCGTGGTGGGCC 931 Query 58832 TCACCTTTGTTCAGGCCGGCATGCACGCGGCGGCGCAGTTCAACACTTTGCAGCCAGTCC 58891 ||||| ||||| |||||| || | |||| | || | || | | |||||| Sbjct 932 TCACCCTTGTTGAGGCCGATCTGAGCCTGGCGCTGGAGGCCGGCATCAAGAATCCAGTCG 991 Query 58892 AGGATGAACAGCGTGCGCTCGATCCGGCCCAGCTCGCGCAGGGCCACGGCCAGTCCGTTC 58951 | |||||||| || |||||||| ||||||| ||| |||| || | |||||| | ||| Sbjct 992 ATCATGAACAGGGTTCGCTCGATGCGGCCCACCTCTCGCAATGCGAGGGCCAGCTCATTC 1051 Query 58952 TGGCGCGGGTAGCTGCCGAGCTTGCGCAGCATCAGCGAGGCGGTGACGGTGCCCTGCT-T 59010 ||||||||||| | |||||||||| || ||| | || || |||| | ||| ||| Sbjct 1052 TGGCGCGGGTAAGAGGCGAGCTTGCGAAGAATCTGGCTGGGGGCGACGAT-CCCCGCTGC 1110 Query 59011 GATCGAGCTGGCC---AGGCGCAGGATGTCGTCCCAG-TGGGCACGCACGTGC--TTGAT 59064 ||||| | ||| | ||||||||||||| |||| || || || | | || || | Sbjct 1111 GATCG---TCGCCATGATGCGCAGGATGTCGGGCCAGTTGCGCTCG-ATGAGCGGTTCA- 1165 Query 59065 GTTCAGGGTGCCGCCGATCAGCGGGCGCAACGTCGGGTAGGCTTGCACGCCCTGCG-GCA 59123 || | | || |||| ||||| ||| || | || ||| | | || ||| | | Sbjct 1166 -TTGATCTTACCTCCGACCAGCGCTCGC-ACAT-TGGCCGGCGT-CGCGTTGGGCGTGAA 1221 Query 59124 CGTACAGCTTGGTTTC--GCCGAGGTCGCGGATGCGCGGCGCGAAGCGGAAGCCTAGC-A 59180 | | || | |||| ||| |||||||| || || ||||| | | |||| ||| | Sbjct 1222 GGCATAGAGTCTTTTCTGAGGGAGATCGCGGATACGGGGGGCGAACCTGTAGCCGAGCAA 1281 Query 59181 GGTGCATCAGGGCAAAGACGTGATCGGTGAAGCCGGCCGTGTCGGTGTAGTGCTCCTCGA 59240 || ||| ||| || || ||||||||||||||| ||||||||| | |||| ||| Sbjct 1282 GGCGCA-GGCGGCGAACACATGATCGGTGAAGCCGCCCGTGTCGGCAAAATGCT-GGCGA 1339 Query 59241 TC-CGCAGGTCGGACTCGTGGTACAGCAGGCCGTCGAGCACATAGGTGGAATCGCGGAC- 59298 | || || | | || | ||||| ||||| || | ||||| | |||| ||| Sbjct 1340 ACGCGGCGGCCCGCGTCATTCATGAGCAGCCCGTCCAGGATATAGGGAGTCTCGCTGACC 1399 Query 59299 ---GCCGACATTCACCACGCGGGTGCTGAACGGCGCGTACTGGTCGGAGATATGGGTATA 59355 |||| || ||| |||| ||||||||| || || ||||| | |||| | || Sbjct 1400 GTTGCCGGGAT----CACCTGGGTTGCGAACGGCGCATATTGATCGGACACATGGCTGTA 1455 Query 59356 GAACAGCCGTCCCGGCTCGCTACCGTACTTCGGGTTGA 59393 | | ||||| || | || || |||| ||||| Sbjct 1456 TCCCTTGAGGCCCGGGACGTTGCCATATTTCGCGTTGA 1493 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 330795302097658