Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rosa_20x_20damascena_20[genbank_20GCA_5F001662545.1_202016-06-13] 307,872 sequences; 711,719,955 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq171 120 3e-22 seq181 118 1e-21 seq21550 114 1e-20 seq135 113 5e-20 seq459 107 2e-18 seq56994 104 3e-17 seq2880 100 3e-16 seq400 98.7 1e-15 seq13557 95.1 1e-14 seq55 93.3 5e-14 seq30148 89.7 6e-13 seq56 87.8 2e-12 seq707 86.0 7e-12 seq3539 84.2 2e-11 seq12770 82.4 9e-11 >seq171 Length=169594 Score = 120 bits (132), Expect = 3e-22 Identities = 161/220 (73%), Gaps = 8/220 (4%) Strand=Plus/Minus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||| | |||||| |||| ||| |||||| |||||||| || || || || |||| | Sbjct 166483 ACGAAGCACCAAGTGCAGAGTGGACTCCTTCTGAATATTATAGTCGGCGAGTGTCCTTCC 166424 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 || || ||||||||||| || || || | || ||||||||| | || | | ||| || Sbjct 166423 ATCCTCAAGCTGCTTACCTGCAAAAATCAATCTCTGCTGGTCTGGGGGAATACCCTCTTT 166364 Query 43088 GTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCG 43143 |||| ||| |||| | ||| | | | | |||||| ||| |||||| || | | Sbjct 166363 GTCC-TGAATTTTAGCTTTCACATTATCAATCGTGTCAGAGCT---TTCCACTTCCAGAG 166308 Query 43144 TGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||||||||||||| || || ||||| |||||||||||||| Sbjct 166307 TGATGGTTTTGCCGGTGAGGGTCTTGACAAAGATTTGCAT 166268 Score = 107 bits (118), Expect = 2e-18 Identities = 156/219 (71%), Gaps = 6/219 (3%) Strand=Plus/Minus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||| | ||| ||||| | || ||||||||||||||||||||||||||| || || | Sbjct 166027 ACGGAGCACTAAATGAAGGGTCGACTCCTTTTGAATATTGTAATCAGCCAGGGTGCGGCC 165968 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 || || || ||||| ||||| || || |||| ||||||||| | || | | ||| || Sbjct 165967 ATCCTCAAGTTGCTTTCCAGCAAAGATAAGTCTCTGCTGGTCTGGTGGGATACCCTCTTT 165908 Query 43088 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCG---CTCGATTCCACATCGACCGT 43144 ||| ||| ||| || | | | | |||||| ||| || || || | || Sbjct 165907 GTCTTGGATCTTTGCCTTCACATTGTCAATGGTGTCGGAACTC---TCAACCTCCAAGGT 165851 Query 43145 GATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 |||||||| || || || ||||| |||||||||||||| Sbjct 165850 TATGGTTTTCCCAGTGAGAGTCTTAACAAAGATTTGCAT 165812 Score = 89.7 bits (98), Expect = 6e-13 Identities = 137/194 (71%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 ||||||||||||||||| ||||| || || || | || || |||||||| ||||| || Sbjct 165774 TCCTTTTGAATATTGTAGTCAGCGAGGGTGCGTCCATCCTCGAGCTGCTTGCCAGCAAAA 165715 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112 || || | |||||||| | || | || |||||||| |||||| ||||| | Sbjct 165714 ATCAGCCTTTGCTGGTCCGGGGGGATGCCTTCCTTGTCTTGGATTTTGGCTTTGACATTA 165655 Query 43113 GCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTT 43169 | | ||||| ||| ||| || || | || ||||| ||||| || || || || Sbjct 165654 TCTATGGTGTCAGAGCT---TTCAACCTCAAGGGTTATGGTCTTGCCAGTGAGAGTTTTG 165598 Query 43170 ACAAAGATTTGCAT 43183 || ||||| ||||| Sbjct 165597 ACGAAGATCTGCAT 165584 Score = 87.8 bits (96), Expect = 2e-12 Identities = 151/217 (70%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 |||||||||||| || | || || || || || |||||||| || ||||| || | Sbjct 166255 ACGCAACACCAAGTGAAGAGTTGATTCTTTCTGGATGTTGTAATCCGCAAGAGTGCGACC 166196 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 || |||| ||| || || || || ||||| | ||||||||| | || | || |||||| Sbjct 166195 ATCCTCTAACTGTTTCCCTGCAAAGATGAGCCTCTGCTGGTCTGGAGGAATGCCCTCCTT 166136 Query 43088 GTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGA 43146 ||| ||| | |||| |||| | | | || || ||| || || | |||| Sbjct 166135 ATCC-TGAATCTTTGCCTTGACATTATCTATTGTATCTGAACTTTCAACCTCCAAGGTGA 166077 Query 43147 TGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 |||| || || || || || || |||||||||||||| Sbjct 166076 TGGTCTTTCCGGTGAGGGTTTTGACAAAGATTTGCAT 166040 >seq181 Length=165841 Score = 118 bits (130), Expect = 1e-21 Identities = 159/215 (74%), Gaps = 10/215 (5%) Strand=Plus/Plus Query 42974 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 43033 ||| | ||||| || |||||||| ||||| || ||||| || |||||||| | || || Sbjct 136545 CACAAGATGCAGAGTACTCTCCTTCTGAATGTTATAATCCGCTAGAGTCCGGCCATCCTC 136604 Query 43034 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 43093 | ||||| |||||||||||||| | ||||||||| | || | | |||||||| | | Sbjct 136605 CAATTGCTTCCCAGCGAATATGAGCCTCTGCTGGTCCGGTGGAATCCCCTCCTTGT-CTT 136663 Query 43094 GATTTTTTG-TTTGAGCGTCG-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATG 43148 || |||| | |||| ||| | | | ||| || |||| ||||| || | ||||| Sbjct 136664 GAATTTTCGCCTTGA-CGTTGTCAATCGTATCGGAGCTC---TCCACCTCCAGAGTGATC 136719 Query 43149 GTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || || || || || ||||| |||||||||||||| Sbjct 136720 GTCTTTCCTGTCAGAGTCTTCACAAAGATTTGCAT 136754 Score = 95.1 bits (104), Expect = 1e-14 Identities = 162/231 (70%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 ||||| || | ||| | |||| ||| | || |||||| || || ||||| || || Sbjct 136984 CCTCCCCTGAGACGGAGGACCAGATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGCG 137043 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 || || || |||| || |||||||| || ||||| ||||| | ||||||||||| || Sbjct 137044 AGGGTGCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGCCTCTGCTGGTCGGGAGGG 137103 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATTC 43132 | || ||||||||| ||| || |||| ||| | | | ||||| |||| || Sbjct 137104 ATGCCTTCCTTGTCCTGGATCTTGGCCTTGA-CGTTGTCGATGGTGTCAGAGCTC---TC 137159 Query 43133 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || |||| |||||||| || || || || || || || |||| ||||| Sbjct 137160 GACCTCGAGGGTGATGGTCTTACCGGTCAGGGTTTTCACGAAGACCTGCAT 137210 Score = 89.7 bits (98), Expect = 6e-13 Identities = 152/214 (71%), Gaps = 10/214 (5%) Strand=Plus/Plus Query 42975 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 43034 |||| ||| | ||| |||||| || ||||||||||| |||||||||| | || || Sbjct 158676 ACCAGATGAAGAGTGGACTCCTTCTGGATATTGTAATCCGCCAGAGTCCTGCCATCCTCC 158735 Query 43035 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 43094 | |||||| || || || || | | |||||| || | || | | |||||| ||| || Sbjct 158736 AACTGCTTTCCGGCAAAGATCAACCTCTGCTGATCCGGGGGAATCCCCTCCTTATCC-TG 158794 Query 43095 ATTTTTTG-TTTGAGCGTCG-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGG 43149 | | || | |||| ||| | | | |||||| |||| ||||| || | ||||||| Sbjct 158795 AATCTTGGCCTTGA-CGTTGTCGATCGTGTCGGAGCTC---TCCACCTCCAGGGTGATGG 158850 Query 43150 TTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 | || ||||| | ||||| || ||||| ||||| Sbjct 158851 TCTTCCCCGTCAAAGTCTTGACGAAGATCTGCAT 158884 Score = 82.4 bits (90), Expect = 9e-11 Identities = 146/212 (69%), Gaps = 6/212 (3%) Strand=Plus/Plus Query 42975 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 43034 ||||| ||||| ||| ||||| || ||||||||||| || || || | |||| || Sbjct 136774 ACCAAGTGCAAAGTGGATTCCTTCTGGATATTGTAATCGGCGAGGGTTCTGCCGTCTTCG 136833 Query 43035 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 43094 || ||||| || ||||| || | | ||||||||| | || | | ||||| ||| | Sbjct 136834 AGTTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGGGGAATTCCTTCCTTATCCTGG 136893 Query 43095 ATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTT 43151 ||||| |||| | | | ||||| |||| || || |||| ||||| || Sbjct 136894 ATTTTAGCCTTGACGTTATCGATGGTGTCGGAGCTC---TCAACCTCGAGAGTGATCGTC 136950 Query 43152 TTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||||| || || || || || ||||| ||||| Sbjct 136951 TTGCCGGTGAGAGTTTTGACGAAGATCTGCAT 136982 Score = 82.4 bits (90), Expect = 9e-11 Identities = 146/212 (69%), Gaps = 6/212 (3%) Strand=Plus/Plus Query 42975 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 43034 ||||| || | ||| |||||| || ||||| ||||||||||| || || | || || Sbjct 158448 ACCAAGTGGAGGGTGGACTCCTTCTGGATATTATAATCAGCCAGGGTACGACCATCCTCG 158507 Query 43035 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 43094 |||||||| || || || || || | ||||||||| | || | | ||||||||| | Sbjct 158508 AGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCCGGTGGGATCCCTTCCTTGTCCTGG 158567 Query 43095 ATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTT 43151 || || ||||| | | | || || |||| ||||| || | || || || Sbjct 158568 ATCTTGGCTTTGACATTATCAATGGTATCGGAGCTC---TCCACCTCCAGAGTAATTGTC 158624 Query 43152 TTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||||| || || ||||| || || || ||||| Sbjct 158625 TTGCCAGTCAGAGTCTTCACGAAAATCTGCAT 158656 >seq21550 Length=4752 Score = 114 bits (126), Expect = 1e-20 Identities = 159/220 (72%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||| | ||||| || | ||| |||||| || || ||||| || || || || || | Sbjct 2414 ACGAAGCACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGCTAGGGTTCGGCC 2473 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 ||| ||||||||||| || ||||| ||||| | ||||||||| | ||| | || |||||| Sbjct 2474 GTCCTCTAGCTGCTTTCCGGCGAAGATGAGCCTCTGCTGGTCCGGCGGGATGCCCTCCTT 2533 Query 43088 GTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGA 43146 || | ||| | || | | | ||| | | | ||||| ||| ||||| || | |||| Sbjct 2534 GT-CTTGAATCTTGGCCTTAACGTTGTCGATGGTGTCCGACGACTCCACCTCCAGGGTGA 2592 Query 43147 TGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTT 43186 | || || |||||||| || || || ||||| ||||| || Sbjct 2593 TCGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATCTT 2632 >seq135 Length=179161 Score = 113 bits (124), Expect = 5e-20 Identities = 145/196 (74%), Gaps = 8/196 (4%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || || || ||||| |||| || |||||||| || ||||| Sbjct 30962 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTCCGGCCGTCCTCGAGCTGCTTTCCGGCGAA 31021 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||| | ||| | || ||||||||| |||||| |||| ||| Sbjct 31022 GATGAGACGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCTTGGATTTTGGCCTTGA-CGT 31080 Query 43112 CG-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 43167 | | | ||||| |||| || || |||| |||||||| ||||| || || || | Sbjct 31081 TGTCGATGGTGTCGGAGCTC---TCGACCTCGAGGGTGATGGTCTTGCCGGTCAGGGTTT 31137 Query 43168 TTACAAAGATTTGCAT 43183 | || ||||| ||||| Sbjct 31138 TGACGAAGATCTGCAT 31153 Score = 82.4 bits (90), Expect = 9e-11 Identities = 138/196 (70%), Gaps = 8/196 (4%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||||||||| ||||||||||||| ||| || | || || | ||||| || || || Sbjct 30278 CTCCTTTTGAATGTTGTAATCAGCCAAAGTGCGGCCATCCTCCAATTGCTTTCCTGCAAA 30337 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 43110 || | | |||||| || | || | | |||||||| | ||| | || | ||||| Sbjct 30338 GATCAACCTCTGCTGATCAGGTGGGATCCCCTCCTTGT-CTTGAATCTTCGCTTTGACAT 30396 Query 43111 TCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 43167 | | | || || |||| || || || | ||||| ||||| ||||| || |||| Sbjct 30397 TGTCAATAGTATCGGAGCTC---TCAACCTCCAGAGTGATCGTTTTCCCCGTCAGAGTCT 30453 Query 43168 TTACAAAGATTTGCAT 43183 | |||||||| ||||| Sbjct 30454 TCACAAAGATCTGCAT 30469 >seq459 Length=124062 Score = 107 bits (118), Expect = 2e-18 Identities = 163/231 (71%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 || || | || ||| | ||||||||||| || |||||| ||||| ||||| || ||| Sbjct 120812 CCACCACGTAGACGGAGCACCAAATGCAGAGTCGACTCCTTCTGAATGTTGTAGTCTGCC 120753 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 || |||| | || || |||||||| || || || ||||| | ||||||||| | || Sbjct 120752 AGTGTCCTACCATCTTCAAGCTGCTTTCCTGCAAAGATGAGCCTCTGCTGGTCTGGGGGA 120693 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCC 43133 | || || |||||| ||| ||| |||| | | | || || ||| |||| Sbjct 120692 ATGCCTTCTTTGTCCTGGATCTTTGCCTTGACATTGTCAATTGTATCAGAGCT---TTCC 120636 Query 43134 ACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 43184 || || | ||||| || || || || || ||||| ||||||||||||||| Sbjct 120635 ACCTCCAAGGTGATTGTCTTCCCAGTAAGGGTCTTCACAAAGATTTGCATT 120585 Score = 100 bits (110), Expect = 3e-16 Identities = 150/212 (71%), Gaps = 6/212 (3%) Strand=Plus/Minus Query 42975 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 43034 ||||| || | ||| ||||||||| ||||||||||| || || || || | || ||| Sbjct 120566 ACCAAGTGAAGGGTGGACTCCTTTTGGATATTGTAATCTGCAAGGGTGCGACCATCCTCT 120507 Query 43035 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 43094 ||||| || ||||| || ||||| | |||||| || | || | | |||||||||| | Sbjct 120506 AGCTGTTTGCCAGCAAAGATGAGCCTCTGCTGATCTGGGGGGATACCCTCCTTGTCCTGG 120447 Query 43095 ATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTT 43151 || ||| |||| | | | || || |||| || || || | |||||||| Sbjct 120446 ATCTTTGCCTTGACATTATCGATTGTATCAGAGCTC---TCGACCTCCAAGGTGATGGTC 120390 Query 43152 TTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || || || || ||||| |||||||| ||||| Sbjct 120389 TTCCCTGTGAGAGTCTTGACAAAGATCTGCAT 120358 Score = 100 bits (110), Expect = 3e-16 Identities = 142/196 (72%), Gaps = 8/196 (4%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || |||||||| || ||||||| | | || || |||||||||||||| || Sbjct 121005 CTCCTTCTGGATGTTGTAATCCGCTAGAGTCCTCCCATCTTCAAGCTGCTTACCAGCAAA 120946 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 43110 |||||| | ||||||||| | || | || |||||||||| ||| | |||| ||| | Sbjct 120945 TATGAGCCTCTGCTGGTCCGGAGGAATGCCCTCCTTGTCC-TGAATCTTTGCTTTCACAT 120887 Query 43111 TCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 43167 | | | || || ||| || || || | || ||||| || || || || |||| Sbjct 120886 TATCAATTGTATCAGAACTC---TCTACCTCCAAGGTTATGGTCTTTCCAGTGAGGGTCT 120830 Query 43168 TTACAAAGATTTGCAT 43183 | ||||| || ||||| Sbjct 120829 TCACAAAAATCTGCAT 120814 >seq56994 Length=1141 Score = 104 bits (114), Expect = 3e-17 Identities = 143/196 (73%), Gaps = 8/196 (4%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || || || || || |||| || ||||||||||| ||||| Sbjct 4 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCGAGCTGCTTACCGGCGAA 63 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| | ||||||||| | || | || |||||||||| ||| || |||| ||| Sbjct 64 GATGAGCCTCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGT 122 Query 43112 CG-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 43167 | | | ||||| |||| || || |||| |||||||| ||||| || || || | Sbjct 123 TGTCGATGGTGTCAGAGCTC---TCGACCTCGAGGGTGATGGTCTTGCCGGTCAGGGTTT 179 Query 43168 TTACAAAGATTTGCAT 43183 | || ||||| ||||| Sbjct 180 TCACGAAGATCTGCAT 195 >seq2880 Length=47671 Score = 100 bits (110), Expect = 3e-16 Identities = 145/202 (72%), Gaps = 2/202 (1%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || || || || || |||| || |||||||| || ||||| Sbjct 12886 CTCCTTCTGGATGTTGTAGTCGGCTAGGGTTCGGCCGTCCTCGAGCTGCTTTCCGGCGAA 12945 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| | |||||||| | || | || ||||||||| ||| | || | | | | Sbjct 12946 GATGAGCCTCTGCTGGTTCGGTGGGATGCCCTCCTTGTCT-TGAATCTTGGCCTTCACAT 13004 Query 43112 CGCC-ACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 | | | ||||| ||||||||| || | ||||| || || |||||||| || || | Sbjct 13005 TGTCGATGGTGTCCGACGATTCCACCTCCAGGGTGATCGTCTTCCCCGTTAGGGTTTTCA 13064 Query 43171 CAAAGATTTGCATTTTTACGCC 43192 | ||||||||||| || |||| Sbjct 13065 CGAAGATTTGCATCTTCTCGCC 13086 >seq400 Length=129899 Score = 98.7 bits (108), Expect = 1e-15 Identities = 141/195 (72%), Gaps = 8/195 (4%) Strand=Plus/Plus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 ||||| || || ||||| || || || || || |||| || |||||||| || |||||| Sbjct 14517 TCCTTCTGGATGTTGTAGTCGGCGAGGGTACGGCCGTCCTCGAGCTGCTTTCCGGCGAAT 14576 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112 ||||| | |||||| || | || | || ||||||||| ||| || |||| ||| Sbjct 14577 ATGAGCCTCTGCTGATCAGGAGGGATGCCCTCCTTGTCTTGGATCTTGGCCTTGA-CGTT 14635 Query 43113 G-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 43168 | | | ||||| |||| || || |||| |||||||| ||||||||||| || || Sbjct 14636 GTCGATGGTGTCGGAGCTC---TCGACCTCGAGGGTGATGGTCTTGCCCGTTAGGGTTTT 14692 Query 43169 TACAAAGATTTGCAT 43183 || || || ||||| Sbjct 14693 CACGAATATCTGCAT 14707 >seq13557 Length=10351 Score = 95.1 bits (104), Expect = 1e-14 Identities = 141/196 (72%), Gaps = 8/196 (4%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||||||||| ||||||||||||| ||| || | || || || ||||| || || || Sbjct 8490 CTCCTTTTGAATGTTGTAATCAGCCAAAGTGCGGCCATCCTCCAGTTGCTTTCCTGCAAA 8431 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 43110 || | | ||||||||| | || | | |||||||| | ||| | |||| ||||| Sbjct 8430 GATCAACCTCTGCTGGTCTGGTGGGATACCCTCCTTGT-CTTGAATCTTTGCTTTGACAT 8372 Query 43111 TCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 43167 | | | || || |||| || || || | ||||| ||||| ||||| || |||| Sbjct 8371 TGTCAATAGTATCCGAGCTC---TCAACCTCCAGAGTGATCGTTTTCCCCGTCAGAGTCT 8315 Query 43168 TTACAAAGATTTGCAT 43183 | |||||||| ||||| Sbjct 8314 TCACAAAGATCTGCAT 8299 >seq55 Length=242041 Score = 93.3 bits (102), Expect = 5e-14 Identities = 138/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 ||||||||| || ||||| ||||| || || || | || || |||||||| ||||| || Sbjct 38213 CTCCTTTTGGATGTTGTAGTCAGCTAGGGTTCGGCCATCCTCAAGCTGCTTGCCAGCAAA 38272 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 || || ||||||||||| | || | || ||||| ||| || | || | | | ||| Sbjct 38273 GATCAGACGCTGCTGGTCTGGGGGAATGCCTTCCTTATCC-TGGATCTTGGCCTTAACGT 38331 Query 43112 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 | | | ||||| || ||||| || | ||||| || ||||| || || ||||| | Sbjct 38332 TGTCAATGGTGTCAGAAGACTCCACCTCAAGGGTGATAGTCTTGCCGGTGAGGGTCTTCA 38391 Query 43171 CAAAGATTTGCAT 43183 | || |||||||| Sbjct 38392 CGAAAATTTGCAT 38404 >seq30148 Length=2559 Score = 89.7 bits (98), Expect = 6e-13 Identities = 99/132 (75%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||| | ||||| || | ||| |||||| || || ||||| || || ||||| || | Sbjct 182 ACGGAGCACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGGCC 123 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 ||| || |||||||| || ||||| || || ||||||||||| | ||| | || |||||| Sbjct 122 GTCCTCGAGCTGCTTTCCGGCGAAGATCAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTT 63 Query 43088 GTCCATGATTTT 43099 |||| ||| || Sbjct 62 GTCCTGGATCTT 51 >seq56 Length=241350 Score = 87.8 bits (96), Expect = 2e-12 Identities = 150/216 (69%), Gaps = 4/216 (2%) Strand=Plus/Minus Query 42975 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 43034 |||||||||| || || || ||||| ||||||| ||| |||| || | || || Sbjct 13283 ACCAAATGCAGAGTTGATTCTTTCTGAATGTTGTAATTAGCAGGAGTACGACCATCCTCG 13224 Query 43035 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 43094 || ||||| | ||| ||||| ||||||||| | || | || ||||| ||| || Sbjct 13223 AGTTGCTTTCTGATGAAAATGAGCATCTGCTGGTCCGGGGGGATACTTTCCTTCTCCTTG 13164 Query 43095 ATTTTTTGTTTGA---GCGTCGCC-ACCGTGTCGCTCGATTCCACATCGACCGTGATGGT 43150 || | |||| |||| | | | |||||||| ||||| || || | |||||||| Sbjct 13163 ATCCTGGCCTTGACAAGCGTTGTCGATAGTGTCGCTAGATTCAACCTCAAGGGTGATGGT 13104 Query 43151 TTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTT 43186 || || |||| || || ||||||||||| || || Sbjct 13103 CTTCCCGGTTACTGTTTTCACAAAGATTTGAATCTT 13068 >seq707 Length=103418 Score = 86.0 bits (94), Expect = 7e-12 Identities = 136/194 (70%), Gaps = 1/194 (1%) Strand=Plus/Minus Query 42994 CCTTT-TGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 ||||| || || ||||| || |||| || || |||| || |||||||| || ||||| Sbjct 63103 CCTTTCTGGATGTTGTAGTCGGCCAAGGTGCGGCCGTCTTCGAGCTGCTTTCCGGCGAAA 63044 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112 || | ||||||||||| | || | || |||||||| ||| || |||| | Sbjct 63043 ATCAAACGCTGCTGGTCCGGAGGAATGCCTTCCTTGTCTTGGATCTTGGCCTTGACATTG 62984 Query 43113 GCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 43172 | | |||||||| || || |||| |||||||| || |||||||| || || || Sbjct 62983 TCGATGGTGTCGCTGCTCTCGACCTCGAGAGTGATGGTCTTCCCCGTTAGGGTTTTCACG 62924 Query 43173 AAGATTTGCATTTT 43186 || || ||||| || Sbjct 62923 AAAATCTGCATCTT 62910 >seq3539 Length=40568 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 42956 TCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 43015 |||||| || | | |||||||| || | ||| |||||||||||| || ||||| || Sbjct 16886 TCCTCCCCTCAGCCTCAACACCAGGTGAAGAGTGGACTCCTTTTGAATGTTATAATCCGC 16827 Query 43016 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGG 43075 ||||| | | || || | ||||| ||||| || || |||| ||| || || | || Sbjct 16826 AAGAGTTCTGCCATCTTCCAATTGCTTGCCAGCAAAGATCAGTCTCTGTTGATCAGGAGG 16767 Query 43076 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 43135 | || || || ||| ||| || ||||| | | | || ||| | || || Sbjct 16766 GATGCCTTCTTTATCCTGGATCTTGGCTTTGACATTGTCGATGGTATCGTTACCCTCAAC 16707 Query 43136 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTT 43186 |||| |||||||| || || ||||| || || || || |||||||| || Sbjct 16706 CTCGAGAGTGATGGTCTTCCCAGTTAGAGTTTTCACGAAAATTTGCATGTT 16656 >seq12770 Length=11292 Score = 82.4 bits (90), Expect = 9e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 |||||| ||| || || ||| ||||||||| |||| |||||||||||||||| |||| Sbjct 8334 AAAAATATTCGCCGTTGCCGGGGATCGAACCCGGGTCACCCGCGTGACAGGCGGGAATAC 8393 Query 60117 TCACCACTATACTAC 60131 | ||||||||||||| Sbjct 8394 TTACCACTATACTAC 8408 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 569617017148160