Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rosa_20x_20damascena_20[genbank_20GCA_5F001662545.1_202016-06-13]
307,872 sequences; 711,719,955 total letters
Query= NC_002816.1
Length=123500
Score E
Sequences producing significant alignments: (Bits) Value
seq21550 123 2e-23
seq28390 118 8e-22
seq16961 118 8e-22
seq181 118 8e-22
seq9104 114 1e-20
seq13557 113 4e-20
seq4683 109 4e-19
seq2880 107 2e-18
seq56994 105 5e-18
seq1675 104 2e-17
seq8125 102 6e-17
seq707 96.9 3e-15
seq135 96.9 3e-15
seq400 95.1 1e-14
seq171 95.1 1e-14
seq56629 91.5 1e-13
seq35007 89.7 4e-13
seq30148 89.7 4e-13
seq55 86.0 5e-12
>seq21550
Length=4752
Score = 123 bits (136), Expect = 2e-23
Identities = 155/213 (73%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||| ||| || ||| ||||||||| |||||||||||| || || |||| ||
Sbjct 2421 ACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGCTAGGGTTCGGCCGTCCTCT 2480
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| || ||||||||||| || | || ||| ||||| || || | ||||||||||| |
Sbjct 2481 AGCTGCTTTCCGGCGAAGATGAGCCTCTGCTGGTCCGGCGGGATGCCCTCCTTGTCTTGA 2540
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|| || |||||| | | | ||||| ||||||||||| ||| ||||||||
Sbjct 2541 ATCTTGGCCTTAACGTTGTCGATGGTGTCCGACGACTCCACCTCCAGGGTGATCGTCTTC 2600
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATGTTG 45340
||||| || || ||||| ||||| ||||| |||
Sbjct 2601 CCCGTTAGGGTTTTCACGAAGATCTGCATCTTG 2633
>seq28390
Length=2812
Score = 118 bits (130), Expect = 8e-22
Identities = 154/213 (72%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||| ||| || ||| ||||||||| |||||||||||| || || |||| ||
Sbjct 506 ACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGCTAGGGTTCGGCCGTCCTCG 565
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| || ||||||||||| || | || ||| ||||| || || | ||||||||||| |
Sbjct 566 AGCTGCTTTCCGGCGAAGATGAGCCTCTGCTGGTCTGGCGGGATGCCCTCCTTGTCTTGA 625
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|| || ||| || | | | ||||| ||||||||||| ||| ||||||||
Sbjct 626 ATCTTGGCCTTCACGTTGTCGATGGTGTCCGACGACTCCACCTCCAGGGTGATCGTCTTC 685
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATGTTG 45340
||||| || || ||||| ||||| ||||| |||
Sbjct 686 CCCGTTAGGGTTTTCACGAAGATCTGCATCTTG 718
>seq16961
Length=7293
Score = 118 bits (130), Expect = 8e-22
Identities = 154/213 (72%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||| ||| || ||| ||||||||| |||||||||||| || || |||| ||
Sbjct 3189 ACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGCTAGGGTTCGGCCGTCCTCA 3130
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| || ||||||||||| || | || ||| ||||| || || | ||||||||||| |
Sbjct 3129 AGCTGCTTTCCGGCGAAGATGAGCCTCTGCTGGTCCGGCGGGATGCCCTCCTTGTCTTGA 3070
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|| || ||| || | | | ||||| ||||||||||| ||| ||||||||
Sbjct 3069 ATCTTGGCCTTCACGTTGTCGATGGTGTCCGACGACTCCACCTCCAGGGTGATCGTCTTC 3010
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATGTTG 45340
||||| || || ||||| ||||| ||||| |||
Sbjct 3009 CCCGTTAGGGTTTTCACGAAGATCTGCATCTTG 2977
>seq181
Length=165841
Score = 118 bits (130), Expect = 8e-22
Identities = 154/209 (74%), Gaps = 3/209 (1%)
Strand=Plus/Plus
Query 45130 CAAG-TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCA 45188
|||| ||||| || ||||||||||||||||| || || || || | || ||||
Sbjct 136547 CAAGATGCAGAGTACTCTCCTTCTGAATGTTATAATCCGCTAGAGTCCGGCCATCCTCCA 136606
Query 45189 GTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAA 45248
||| || || |||||||| | || ||| ||||| || || | ||||||||||| ||
Sbjct 136607 ATTGCTTCCCAGCGAATATGAGCCTCTGCTGGTCCGGTGGAATCCCCTCCTTGTCTTGAA 136666
Query 45249 TTTTTTGCTTAACCGCCGCCACGC-TGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|||| ||| || | | || | | || | ||||||||||| || ||||||||
Sbjct 136667 TTTTCGCCTTGAC-GTTGTCAATCGTATCGGAGCTCTCCACCTCCAGAGTGATCGTCTTT 136725
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
|| ||||||||||||||||||||||||||
Sbjct 136726 CCTGTCAGAGTCTTCACAAAGATTTGCAT 136754
Score = 118 bits (130), Expect = 8e-22
Identities = 163/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 45109 GCCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTT 45168
|||||| ||||| | | ||||||||||| ||| ||||||||| |||||||| |||
Sbjct 158885 GCCACCCCTCAACCGGAGCACCAAGTGCAGAGTGGACTCCTTCTGGATGTTGTAATCGGC 158944
Query 45169 CAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGG 45228
||| | |||| |||| ||| ||||||||||| ||||||| ||| ||||| || ||
Sbjct 158945 CAGGGTCCTGCCGTCCTCCAATTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGGGG 159004
Query 45229 CACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCAC 45288
| |||||||||||| || || ||| || | | | |||| | ||| ||
Sbjct 159005 AATTCCCTCCTTGTCCTGGATCTTAGCCTTGACGTTGTCGATGGTGTCGGAGCTCTCAAC 159064
Query 45289 CTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
||| | || || |||||||| || || || || || ||||| |||||
Sbjct 159065 CTCGAGAGTGATGGTCTTGCCGGTGAGGGTTTTGACGAAGATCTGCAT 159112
Score = 116 bits (128), Expect = 3e-21
Identities = 141/192 (73%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204
|||||||||||| || || || || | |||| |||| |||| ||| ||||| || ||
Sbjct 136335 CTCCTTCTGAATATTATAATCCGCCAATGTGCGACCGTCCTCCAATTGCTTTCCAGCAAA 136394
Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264
||||||| ||| ||||| || || | ||||||||||| ||| ||| || ||
Sbjct 136395 GATCAACCTCTGCTGGTCCGGTGGGATTCCCTCCTTGTCTTGAATCTTTGCTTTGACATT 136454
Query 45265 CGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCAC 45324
| | |||| || ||||||||| | || |||||||| |||||||||||||||||
Sbjct 136455 GTCAATAGTGTCAGAACTCTCCACCTCAAGCGTGATCGTCTTCCCCGTCAGAGTCTTCAC 136514
Query 45325 AAAGATTTGCAT 45336
||||| |||||
Sbjct 136515 GAAGATCTGCAT 136526
Score = 109 bits (120), Expect = 4e-19
Identities = 161/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169
||||| |||| |||| |||||||||| ||| |||||||| || ||||| |||
Sbjct 136756 CCACCCCTCAGCCTTAGAACCAAGTGCAAAGTGGATTCCTTCTGGATATTGTAATCGGCG 136815
Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229
|| | |||| || ||||| ||||||||||| ||||||| ||| ||||| || ||
Sbjct 136816 AGGGTTCTGCCGTCTTCGAGTTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGGGGA 136875
Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289
| || ||||| ||| ||||| ||| || | | | |||| | ||| |||
Sbjct 136876 ATTCCTTCCTTATCCTGGATTTTAGCCTTGACGTTATCGATGGTGTCGGAGCTCTCAACC 136935
Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCATG 45337
|| | || ||||||||||| || ||||| || || ||||| ||||||
Sbjct 136936 TCGAGAGTGATCGTCTTGCCGGTGAGAGTTTTGACGAAGATCTGCATG 136983
Score = 104 bits (114), Expect = 2e-17
Identities = 149/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||| ||| || ||| ||||||||| |||||||||||| || || |||| ||
Sbjct 159360 ACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTACGGCCGTCCTCG 159419
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| || ||||||||||| || | || || ||||| ||||| | ||||||||||||
Sbjct 159420 AGCTGCTTTCCGGCGAAGATGAGCCTTTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGG 159479
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|| || ||| || | | | |||| | ||| ||||| | ||| || ||||||
Sbjct 159480 ATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGCTCTCGACCTCGAGGGTGATGGTCTTG 159539
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATG 45337
|| || || || ||||| ||||| ||||||
Sbjct 159540 CCGGTGAGGGTTTTCACGAAGATCTGCATG 159569
Score = 100 bits (110), Expect = 2e-16
Identities = 138/193 (72%), Gaps = 0/193 (0%)
Strand=Plus/Plus
Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204
||||||||| |||||||||||| || ||| |||| || || || |||||||||||
Sbjct 137019 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCGAGCTGCTTTCCGGCGAA 137078
Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264
|| | || ||| ||||||||||| | || ||||||||| || || ||| ||
Sbjct 137079 GATGAGCCTCTGCTGGTCGGGAGGGATGCCTTCCTTGTCCTGGATCTTGGCCTTGACGTT 137138
Query 45265 CGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCAC 45324
| | | |||| | ||| ||||| | ||| || ||||| || ||||| || |||||
Sbjct 137139 GTCGATGGTGTCAGAGCTCTCGACCTCGAGGGTGATGGTCTTACCGGTCAGGGTTTTCAC 137198
Query 45325 AAAGATTTGCATG 45337
|||| ||||||
Sbjct 137199 GAAGACCTGCATG 137211
Score = 91.5 bits (100), Expect = 1e-13
Identities = 146/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||| || || ||| ||||||||| || ||||| || ||| | | || |||
Sbjct 158676 ACCAGATGAAGAGTGGACTCCTTCTGGATATTGTAATCCGCCAGAGTCCTGCCATCCTCC 158735
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
| || |||||||| || ||||||| ||| || || || || | |||||||| ||| |
Sbjct 158736 AACTGCTTTCCGGCAAAGATCAACCTCTGCTGATCCGGGGGAATCCCCTCCTTATCCTGA 158795
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|| || ||| || | | |||| | ||||||||||| ||| || |||||
Sbjct 158796 ATCTTGGCCTTGACGTTGTCGATCGTGTCGGAGCTCTCCACCTCCAGGGTGATGGTCTTC 158855
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATG 45337
||||||| |||||| || ||||| ||||||
Sbjct 158856 CCCGTCAAAGTCTTGACGAAGATCTGCATG 158885
>seq9104
Length=17150
Score = 114 bits (126), Expect = 1e-20
Identities = 153/213 (72%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||| ||| || ||| ||||||||| |||||||||||| || || |||| ||
Sbjct 3513 ACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGCTAGGGTTCGGCCGTCCTCG 3454
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| || ||||||||||| || | || ||| ||||| || || | ||||||||||| |
Sbjct 3453 AGCTGCTTTCCGGCGAAGATGAGCCTCTGCTGGTCCGGTGGGATGCCCTCCTTGTCTTGA 3394
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|| || ||| || | | | ||||| ||||||||||| ||| ||||||||
Sbjct 3393 ATCTTGGCCTTCACGTTGTCGATGGTGTCCGACGACTCCACCTCCAGGGTGATCGTCTTC 3334
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATGTTG 45340
|| || || || ||||| ||||| ||||| |||
Sbjct 3333 CCTGTTAGGGTTTTCACGAAGATCTGCATCTTG 3301
>seq13557
Length=10351
Score = 113 bits (124), Expect = 4e-20
Identities = 151/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 45127 TACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTC 45186
||| | ||| || || |||||| ||||||||||| || || ||| | || ||
Sbjct 8508 TACAAGGTGGAGGGTAGACTCCTTTTGAATGTTGTAATCAGCCAAAGTGCGGCCATCCTC 8449
Query 45187 CAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGC 45246
|||||| ||||| || || ||||||| ||| ||||| || || | ||||||||||||
Sbjct 8448 CAGTTGCTTTCCTGCAAAGATCAACCTCTGCTGGTCTGGTGGGATACCCTCCTTGTCTTG 8389
Query 45247 AATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTT 45306
||| ||| || || | | | ||| | ||| ||||||| || ||||| ||
Sbjct 8388 AATCTTTGCTTTGACATTGTCAATAGTATCCGAGCTCTCAACCTCCAGAGTGATCGTTTT 8329
Query 45307 GCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
||||||||||||||||||||||| |||||
Sbjct 8328 CCCCGTCAGAGTCTTCACAAAGATCTGCAT 8299
>seq4683
Length=32477
Score = 109 bits (120), Expect = 4e-19
Identities = 142/194 (73%), Gaps = 2/194 (1%)
Strand=Plus/Minus
Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204
||||||||| || ||||||||| || || |||| || |||||||| ||||||||
Sbjct 3743 CTCCTTCTGGATATTGTAGTCGGCGAGGGTCCGGCCGTCCTCAAGTTGTTTGCCGGCGAA 3684
Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264
|| | || |||||| || ||||| | |||||||||||| | | || |||| ||
Sbjct 3683 GATGAGCCTCTGTTGATCTGGAGGGATGCCCTCCTTGTCCTGGA-TCTTCGCTTTGACGT 3625
Query 45265 CG-CCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCA 45323
| | | | |||| | ||||||||| | ||| || |||||||| || || || ||||
Sbjct 3624 TGTCGATGGTGTCAGAGCTCTCCACCTCAAGGGTGATGGTCTTGCCGGTTAGGGTTTTCA 3565
Query 45324 CAAAGATTTGCATG 45337
||||||| ||||||
Sbjct 3564 CAAAGATCTGCATG 3551
>seq2880
Length=47671
Score = 107 bits (118), Expect = 2e-18
Identities = 151/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||| ||| || || ||||||||| |||||||||||| || || |||| ||
Sbjct 12869 ACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGCTAGGGTTCGGCCGTCCTCG 12928
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| || ||||||||||| || | || ||| |||| || || | ||||||||||| |
Sbjct 12929 AGCTGCTTTCCGGCGAAGATGAGCCTCTGCTGGTTCGGTGGGATGCCCTCCTTGTCTTGA 12988
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|| || ||| || | | | ||||| |||||||||| ||| ||||||||
Sbjct 12989 ATCTTGGCCTTCACATTGTCGATGGTGTCCGACGATTCCACCTCCAGGGTGATCGTCTTC 13048
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATGTT 45339
||||| || || ||||| ||||||||||| ||
Sbjct 13049 CCCGTTAGGGTTTTCACGAAGATTTGCATCTT 13080
>seq56994
Length=1141
Score = 105 bits (116), Expect = 5e-18
Identities = 139/193 (72%), Gaps = 0/193 (0%)
Strand=Plus/Plus
Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204
||||||||| |||||||||||| || ||| |||| || || || || ||||||||
Sbjct 4 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCGAGCTGCTTACCGGCGAA 63
Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264
|| | || ||| ||||| ||||| | |||||||||||| || || ||| ||
Sbjct 64 GATGAGCCTCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTT 123
Query 45265 CGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCAC 45324
| | | |||| | ||| ||||| | ||| || |||||||| ||||| || |||||
Sbjct 124 GTCGATGGTGTCAGAGCTCTCGACCTCGAGGGTGATGGTCTTGCCGGTCAGGGTTTTCAC 183
Query 45325 AAAGATTTGCATG 45337
||||| ||||||
Sbjct 184 GAAGATCTGCATG 196
>seq1675
Length=66877
Score = 104 bits (114), Expect = 2e-17
Identities = 141/194 (73%), Gaps = 2/194 (1%)
Strand=Plus/Minus
Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204
||||||||| || |||||||| || || |||| || |||||||| ||||||||
Sbjct 7173 CTCCTTCTGGATATTGTAGTCAGCGAGGGTCCGGCCGTCCTCAAGTTGTTTGCCGGCGAA 7114
Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264
|| | || |||||| || ||||| | |||||||||||| | | || |||| ||
Sbjct 7113 GATGAGCCTCTGTTGATCTGGAGGGATGCCCTCCTTGTCCTGGA-TCTTGGCTTTGACGT 7055
Query 45265 CG-CCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCA 45323
| | | | |||| | ||||||||| | ||| || |||||||| || || || ||||
Sbjct 7054 TGTCGATGGTGTCAGAGCTCTCCACCTCAAGGGTGATGGTCTTGCCGGTTAGGGTTTTCA 6995
Query 45324 CAAAGATTTGCATG 45337
||||||| ||||||
Sbjct 6994 CAAAGATCTGCATG 6981
>seq8125
Length=19300
Score = 102 bits (112), Expect = 6e-17
Identities = 153/216 (71%), Gaps = 6/216 (3%)
Strand=Plus/Plus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAG---TTGGCGATCGTCG 45184
|||| ||| || ||| ||||||||| |||||||||||| || | ||| ||| |||
Sbjct 9921 ACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGCTAGGGTTCGGCCATCCTCG 9980
Query 45185 TCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244
||||| ||||||||||| || | || ||| ||||| || || | |||||||||||
Sbjct 9981 ---AGTTGCTTTCCGGCGAAGATGAGCCTCTGCTGGTCCGGCGGGATGCCCTCCTTGTCT 10037
Query 45245 GCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTC 45304
||| || ||| || | | | ||||| |||||| |||| ||| ||||||
Sbjct 10038 TGAATCTTGGCCTTCACGTTGTCGATGGTGTCCGACGACTCCACTTCCAGGGTGATCGTC 10097
Query 45305 TTGCCCGTCAGAGTCTTCACAAAGATTTGCATGTTG 45340
|| |||| || || |||| || || ||||| |||
Sbjct 10098 TTCCCCGCTAGGGTTTTCATGAAAATCTGCATCTTG 10133
>seq707
Length=103418
Score = 96.9 bits (106), Expect = 3e-15
Identities = 137/193 (71%), Gaps = 0/193 (0%)
Strand=Plus/Minus
Query 45149 TTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATC 45208
||||| |||||||||||| || ||| |||| || || || ||||||||||| |||
Sbjct 63100 TTCTGGATGTTGTAGTCGGCCAAGGTGCGGCCGTCTTCGAGCTGCTTTCCGGCGAAAATC 63041
Query 45209 AACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCC 45268
|| ||||| ||||| ||||| | || |||||||| || || ||| || |
Sbjct 63040 AAACGCTGCTGGTCCGGAGGAATGCCTTCCTTGTCTTGGATCTTGGCCTTGACATTGTCG 62981
Query 45269 ACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAG 45328
| | |||| | | ||| ||||| | || || ||||| ||||| || || ||||| ||
Sbjct 62980 ATGGTGTCGCTGCTCTCGACCTCGAGAGTGATGGTCTTCCCCGTTAGGGTTTTCACGAAA 62921
Query 45329 ATTTGCATGTTGC 45341
|| ||||| ||||
Sbjct 62920 ATCTGCATCTTGC 62908
>seq135
Length=179161
Score = 96.9 bits (106), Expect = 3e-15
Identities = 137/193 (71%), Gaps = 0/193 (0%)
Strand=Plus/Plus
Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204
||||||||| |||||||||||| || || |||| || || || |||||||||||
Sbjct 30962 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTCCGGCCGTCCTCGAGCTGCTTTCCGGCGAA 31021
Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264
|| | ||||| ||||| || || | ||||||||||| ||||| ||| ||
Sbjct 31022 GATGAGACGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCTTGGATTTTGGCCTTGACGTT 31081
Query 45265 CGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCAC 45324
| | | |||| | ||| ||||| | ||| || |||||||| ||||| || || ||
Sbjct 31082 GTCGATGGTGTCGGAGCTCTCGACCTCGAGGGTGATGGTCTTGCCGGTCAGGGTTTTGAC 31141
Query 45325 AAAGATTTGCATG 45337
||||| ||||||
Sbjct 31142 GAAGATCTGCATG 31154
Score = 84.2 bits (92), Expect = 2e-11
Identities = 144/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
||||| || || || |||||||| || || || ||| || || |||| |||
Sbjct 30717 ACCAAATGGAGAGTCGATTCCTTCTGGATATTATAATCGGCGAGGGTCCGGCCGTCCTCC 30776
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
| || ||||||||||| |||| || ||| || || ||||| | ||||||||||| |
Sbjct 30777 AACTGCTTTCCGGCGAAGATCAGCCTCTGCTGATCCGGAGGAATCCCCTCCTTGTCTTGA 30836
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
||||| ||| || | | |||| | ||| ||||||| || ||||||||
Sbjct 30837 ATTTTCGCCTTGACGTTGTCGATTGTGTCAGAGCTCTCGACCTCCAGAGTGATCGTCTTC 30896
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
|| || || || ||||| ||||| |||||
Sbjct 30897 CCGGTGAGGGTTTTCACGAAGATCTGCAT 30925
>seq400
Length=129899
Score = 95.1 bits (104), Expect = 1e-14
Identities = 136/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 45146 TCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAAT 45205
|||||||| |||||||||||| || || |||| || || || ||||||||||||
Sbjct 14517 TCCTTCTGGATGTTGTAGTCGGCGAGGGTACGGCCGTCCTCGAGCTGCTTTCCGGCGAAT 14576
Query 45206 ATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCC 45265
|| | || ||| || || ||||| | ||||||||||| || || ||| ||
Sbjct 14577 ATGAGCCTCTGCTGATCAGGAGGGATGCCCTCCTTGTCTTGGATCTTGGCCTTGACGTTG 14636
Query 45266 GCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACA 45325
| | | |||| | ||| ||||| | ||| || ||||||||||| || || |||||
Sbjct 14637 TCGATGGTGTCGGAGCTCTCGACCTCGAGGGTGATGGTCTTGCCCGTTAGGGTTTTCACG 14696
Query 45326 AAGATTTGCATG 45337
|| || ||||||
Sbjct 14697 AATATCTGCATG 14708
Score = 89.7 bits (98), Expect = 4e-13
Identities = 135/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204
||||||||||||||| || || || ||| | || |||||||| |||||||| ||
Sbjct 14288 CTCCTTCTGAATGTTATAATCAGCCAAAGTGCGGCCATCCTCCAGTTGCTTTCCGGCAAA 14347
Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264
||||||| ||| ||||| || || | || || ||||| ||| ||| || ||
Sbjct 14348 GATCAACCTCTGCTGGTCCGGTGGGATTCCTTCTTTGTCTTGAATCTTTGCTTTGACATT 14407
Query 45265 CGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCAC 45324
| | | | || | ||| ||||||| || || |||||||| |||| |||||||||
Sbjct 14408 GTCAATGGTATCGGAGCTCTCAACCTCCAGAGTGATTGTCTTGCCTGTCAAAGTCTTCAC 14467
Query 45325 AAAGATTTGCAT 45336
||| | |||||
Sbjct 14468 AAAAACCTGCAT 14479
>seq171
Length=169594
Score = 95.1 bits (104), Expect = 1e-14
Identities = 147/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
||||||||||| ||| |||||||||||| || |||||| ||| | | || ||
Sbjct 166476 ACCAAGTGCAGAGTGGACTCCTTCTGAATATTATAGTCGGCGAGTGTCCTTCCATCCTCA 166417
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| || || || || || ||||| | ||| ||||| || || | |||||| |||||| |
Sbjct 166416 AGCTGCTTACCTGCAAAAATCAATCTCTGCTGGTCTGGGGGAATACCCTCTTTGTCCTGA 166357
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
||||| || || | | |||| | ||||| |||| || || || |||
Sbjct 166356 ATTTTAGCTTTCACATTATCAATCGTGTCAGAGCTTTCCACTTCCAGAGTGATGGTTTTG 166297
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATG 45337
|| || || ||||| |||||||||||||||
Sbjct 166296 CCGGTGAGGGTCTTGACAAAGATTTGCATG 166267
Score = 91.5 bits (100), Expect = 1e-13
Identities = 136/193 (70%), Gaps = 0/193 (0%)
Strand=Plus/Minus
Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204
|||||| ||||| ||||| || ||| ||| | || || ||||| ||||| || ||
Sbjct 166003 CTCCTTTTGAATATTGTAATCAGCCAGGGTGCGGCCATCCTCAAGTTGCTTTCCAGCAAA 165944
Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264
|| | | ||| ||||| || || | |||||| ||||| || ||| ||| ||
Sbjct 165943 GATAAGTCTCTGCTGGTCTGGTGGGATACCCTCTTTGTCTTGGATCTTTGCCTTCACATT 165884
Query 45265 CGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCAC 45324
| | | |||| || ||| ||||||| ||| || || || || || |||||||| ||
Sbjct 165883 GTCAATGGTGTCGGAACTCTCAACCTCCAAGGTTATGGTTTTCCCAGTGAGAGTCTTAAC 165824
Query 45325 AAAGATTTGCATG 45337
|||||||||||||
Sbjct 165823 AAAGATTTGCATG 165811
Score = 82.4 bits (90), Expect = 6e-11
Identities = 146/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 45125 AATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCG 45184
|| |||||||| || || || ||||| |||||||| || || |||| | ||
Sbjct 166251 AACACCAAGTGAAGAGTTGATTCTTTCTGGATGTTGTAATCCGCAAGAGTGCGACCATCC 166192
Query 45185 TCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244
|| | ||||| || || || || | || ||| ||||| ||||| | |||||||| |||
Sbjct 166191 TCTAACTGTTTCCCTGCAAAGATGAGCCTCTGCTGGTCTGGAGGAATGCCCTCCTTATCC 166132
Query 45245 GCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTC 45304
||| ||| ||| || | | | || || || ||||||| ||| || |||
Sbjct 166131 TGAATCTTTGCCTTGACATTATCTATTGTATCTGAACTTTCAACCTCCAAGGTGATGGTC 166072
Query 45305 TTGCCCGTCAGAGTCTTCACAAAGATTTGCATG 45337
|| || || || || || |||||||||||||||
Sbjct 166071 TTTCCGGTGAGGGTTTTGACAAAGATTTGCATG 166039
>seq56629
Length=1151
Score = 91.5 bits (100), Expect = 1e-13
Identities = 150/215 (70%), Gaps = 6/215 (3%)
Strand=Plus/Minus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAG---TTGGCGATCGTCG 45184
|||| ||| || || ||||||||| |||||||||||| || | ||| ||| |||
Sbjct 647 ACCAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGCTAGGGTTCGGCCATCCTCG 588
Query 45185 TCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244
|| || ||||||||||| || | || || ||||| || | | ||||| |||||
Sbjct 587 ---AGCTGCTTTCCGGCGAAGATGAGCCTTTGCTGGTCCGGTGAGATGCCCTCATTGTCT 531
Query 45245 GCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTC 45304
||| || ||| || | | | ||||| |||||||||| ||| ||||||
Sbjct 530 TGAATCTTGGCCTTCACATTGTCGATGGTGTCCGACGATTCCACCTCCAGGGTGATCGTC 471
Query 45305 TTGCCCGTCAGAGTCTTCACAAAGATTTGCATGTT 45339
|| ||||| || || ||||| ||||| ||||| ||
Sbjct 470 TTCCCCGTTAGGGTTTTCACGAAGATCTGCATCTT 436
>seq35007
Length=2034
Score = 89.7 bits (98), Expect = 4e-13
Identities = 135/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204
||||||||||||||| || || || ||| | || |||||||| |||||||| ||
Sbjct 1857 CTCCTTCTGAATGTTATAATCAGCCAAAGTGCGGCCATCCTCCAGTTGCTTTCCGGCAAA 1798
Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264
||||||| ||| ||||| || || | || |||||||| ||| ||| || ||
Sbjct 1797 GATCAACCTCTGCTGGTCCGGTGGGATTCCTTCCTTGTCTTGAATCTTTGCTTTGACATT 1738
Query 45265 CGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCAC 45324
| | | | || | ||| ||||||| || || |||||||| |||| ||||| ||
Sbjct 1737 GTCAATGGTATCGGAGCTCTCAACCTCCAAAGTGATTGTCTTGCCTGTCAAGGTCTTGAC 1678
Query 45325 AAAGATTTGCAT 45336
||| || |||||
Sbjct 1677 AAATATCTGCAT 1666
>seq30148
Length=2559
Score = 89.7 bits (98), Expect = 4e-13
Identities = 90/117 (77%), Gaps = 0/117 (0%)
Strand=Plus/Minus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||| ||| || ||| ||||||||| |||||||||||| || ||| |||| ||
Sbjct 175 ACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGGCCGTCCTCG 116
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244
|| || ||||||||||| |||| ||||| ||||| || || | ||||||||||||
Sbjct 115 AGCTGCTTTCCGGCGAAGATCAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCC 59
>seq55
Length=242041
Score = 86.0 bits (94), Expect = 5e-12
Identities = 147/213 (69%), Gaps = 8/213 (4%)
Strand=Plus/Plus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCG----TC 45183
|||||||| || || |||||| || ||||||||| |||| | | | ||| ||
Sbjct 38196 ACCAAGTGGAGGGTTGACTCCTTTTGGATGTTGTAG----TCAGCTAGGGTTCGGCCATC 38251
Query 45184 GTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTC 45243
|| || || || || || || |||| ||||| ||||| || || | || ||||| ||
Sbjct 38252 CTCAAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCTGGGGGAATGCCTTCCTTATC 38311
Query 45244 CGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGT 45303
| || || |||||| | | | |||| | ||||||||| | ||| || ||
Sbjct 38312 CTGGATCTTGGCCTTAACGTTGTCAATGGTGTCAGAAGACTCCACCTCAAGGGTGATAGT 38371
Query 45304 CTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
|||||| || || |||||||| || ||||||||
Sbjct 38372 CTTGCCGGTGAGGGTCTTCACGAAAATTTGCAT 38404
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 393592802785312
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |