Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rosa_20x_20damascena_20[genbank_20GCA_5F001662545.1_202016-06-13] 307,872 sequences; 711,719,955 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq193897 86.0 8e-12 >seq193897 Length=263 Score = 86.0 bits (94), Expect = 8e-12 Identities = 107/147 (73%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 66206 CCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGG 66265 || |||| ||| |||||||| | || | ||| || | |||| |||||| | ||| || Sbjct 113 CCTTTTGCCTCCCCCCTGATCAACATAACGAGCAGTATCATTAAAAACTCGTAGCATCGG 172 Query 66266 AATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAATATT 66325 ||| || ||||||||||| ||||| || || ||||| || ||| | |||||||| || Sbjct 173 AATGATGCCATTGGATGTCCCATTTGTTCCACGAATATAACTGCCAGTGGCACGAATGTT 232 Query 66326 ACTAATTGATAGACCTATTCCCCCTGC 66352 || || | ||| |||||||| || Sbjct 233 GTGAACAGAGACACCAATTCCCCCAGC 259 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 655639887796480