Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rosa_20x_20damascena_20[genbank_20GCA_5F001662545.1_202016-06-13] 307,872 sequences; 711,719,955 total letters Query= NC_006882.2 Length=45176 Score E Sequences producing significant alignments: (Bits) Value seq5638 383 5e-102 seq11001 338 2e-88 seq11993 192 2e-44 seq3447 187 7e-43 seq2785 183 9e-42 seq3141 174 5e-39 seq902 159 1e-34 seq63634 154 4e-33 seq31866 129 2e-25 seq140248 107 6e-19 seq136643 105 2e-18 seq105467 104 7e-18 >seq5638 Length=27578 Score = 383 bits (424), Expect = 5e-102 Identities = 618/879 (70%), Gaps = 16/879 (2%) Strand=Plus/Minus Query 19292 TTGTGAGTGGGTCACAAGTACCGAGAACCGCCTTTATGTAGGTTGGTTTGGAGTACTTAT 19351 |||| | ||| | || || || || ||| ||||| | || || ||||| || | || Sbjct 22450 TTGTAATTGGATAACCAGAACTGA-AACTATCTTTACATTGGATGATTTGGTGTTTTGAT 22392 Query 19352 GATTCCTTGCTTACTAGCTGCTACTACTTGCTTTATACTCGCCTTTATCGCAGCACCGCC 19411 ||| ||| ||| | | || ||| || ||||| | || || || || |||| | Sbjct 22391 GATCCCTACTTTATTGACCGCAACTTCTGTATTTATTATTGCTTTCATTGCTGCACTTTC 22332 Query 19412 TGTAGATATAGATGGCATACGTGAGCCAGTTTCCGGCTCGTTAATGTACGGAAACAATAT 19471 |||||||| ||||| || || || || ||||| | || ||| | |||||||||||||| Sbjct 22331 GGTAGATATTGATGGTATTCGCGAACCTGTTTCTTGATCTTTACTTTACGGAAACAATAT 22272 Query 19472 TATTTCTGGAGCAGTAGTTCCAAGCTCCAATGCA---ATAGGACTGCACTTTTATCCGAT 19528 ||||||||| || || | || | || |||| ||||| |||||||||| || || Sbjct 22271 TATTTCTGGTGCCGTTATCCCTACTTC---TGCATATATAGGTTTGCACTTTTACCCAAT 22215 Query 19529 CTGGGAAGCCGGCACTTTAGATGAGTGGTTATACAACGGCGGTCCATATCAACTTGTTGT 19588 ||||||| | | | ||||| | |||||||| || ||||| ||| | || |||| Sbjct 22214 ATGGGAAGTGGCTTCCGTTGATGAATAATTATACAATGGTGGTCCTTATGAGCTAATTGT 22155 Query 19589 CTTCCACTTCTTAATAGGAGTAGCA-GC-ATACGCTGGTAGACAGTGGGAACTATCTTAC 19646 | |||||| || | | ||||| || ||| | ||| | ||||| |||| || Sbjct 22154 TCTACACTTCATACTTGTTGTAGCTTGCTATATG--GGTCGTGAGTGGAAACTTAGTTTT 22097 Query 19647 AGATTAGGAATGAGACCATGGATATTCGTAGCATATACAGCACCACTATCAGCAGCTCTT 19706 | | || | | || ||||| | || |||||| |||| || | |||| | | | Sbjct 22096 CGTCTGGG---GCGCCCTTGGATTGTTGTTGCATATTCAGCTCCTGTTGCAGCTGTTACT 22040 Query 19707 GCTGTGTTTCTCGTT-TACCCATTTGGGCAAGGGAGTTTTAGTGATGGTATGCCTCTTGG 19765 ||||| ||||| | | |||||| |||| ||||| || ||| ||| |||||||| | || Sbjct 22039 GCTGT-TTTCTTGATCTACCCAATTGGTCAAGGAAGCTTTTCTGACGGTATGCCGCGAGG 21981 Query 19766 TATCTCTGGTACTTTTAACTTTATGTTCGTATTCCAAGCAGAACACAATATCCTTATGCA 19825 |||||||||||||| ||||| ||| | ||||||||||| || ||||| ||||||||||| Sbjct 21980 AATCTCTGGTACTTTCAACTTCATGATTGTATTCCAAGCTGAGCACAACATCCTTATGCA 21921 Query 19826 TCCGTTCCACATGCTCGGTGTTGCTGGCGTATTCGGTGGATCTCTTTTCTCTGCTATGCA 19885 || || |||||||| ||||| | ||| ||||||| || || || ||| ||||||||| Sbjct 21920 CCCATTTCACATGCTAGGTGTGGTTGGTGTATTCGACGGCTCCCTATTCAGTGCTATGCA 21861 Query 19886 CGGAAGTTTGGTTACTTCCTCGATCATCAAGGAAACAACTGAGGATGTATCGCAGAACTA 19945 || |||||| | || | |||| |||||| || || |||||| || | Sbjct 21860 AGGTTCTTTGGTAATCTCTAGTTTGATCAGGGAAACCACAGAAAATGTATTTGCTAATGA 21801 Query 19946 TGGCTATAAGTTCGGGCAAGATGAAGAGACATATAATATTGTCGCTGCACACGGGTACTT 20005 || || | |||| ||||| ||||| || |||||||| || || || || || || Sbjct 21800 AGGTTACAGATTCGATCAAGAGGAAGAAACTTATAATATCGTACTAGCTCATGGTTATTT 21741 Query 20006 TGGGAGATTGATATTTCAATATGCTTCTTTCAATAATTCTCGTTCTTTACATTTCTTTCT 20065 ||| ||||||| || ||||||||| |||||| ||||||||||||||||| ||||| | Sbjct 21740 TGGCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACACTTCTTCTT 21681 Query 20066 TGCTACTTTCCCCGTGGTTGGCATATGGCTTACCTCCATGGGAATCTGCACTATGGCTTT 20125 ||| ||| || || || || || | | | ||| | | | || |||||||| |||| Sbjct 21680 AGCTGCTTGGCCTGTAGTAGGTATCTAGTTCACCGCTTTAAGTATTAGCACTATGACTTT 21621 Query 20126 CAACCTTAATGGTTTTAACTTTAACCAGTCAGTAGTTGA 20164 |||| | ||||| ||||| || || || | ||| |||| Sbjct 21620 CAACTTAAATGGATTTAATTTCAATCAAGCTGTATTTGA 21582 >seq11001 Length=13740 Score = 338 bits (374), Expect = 2e-88 Identities = 397/534 (74%), Gaps = 2/534 (0%) Strand=Plus/Minus Query 19630 AGTGGGAACTATCTTACAGATTAGGAATGAGACCATGGATATTCGTAGCATATACAGCAC 19689 |||||||||| || | | | || ||| | || ||||| || |||||| |||| | Sbjct 5813 AGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGATTGCGGTTGCATATTCAGCTC 5754 Query 19690 CACTATCAGCAGCTCTTGCTGTGTTTCTCGTT-TACCCATTTGGGCAAGGGAGTTTTAGT 19748 | | |||| ||| |||||| ||||| | | |||||| |||| ||||| || ||| | Sbjct 5753 CTGTTGCAGCTGCTACTGCTGT-TTTCTTGATCTACCCAATTGGTCAAGGAAGCTTTTCT 5695 Query 19749 GATGGTATGCCTCTTGGTATCTCTGGTACTTTTAACTTTATGTTCGTATTCCAAGCAGAA 19808 || ||||||||||| || |||||||||||||| ||||| ||| | ||||||||||| || Sbjct 5694 GACGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATGATTGTATTCCAAGCTGAG 5635 Query 19809 CACAATATCCTTATGCATCCGTTCCACATGCTCGGTGTTGCTGGCGTATTCGGTGGATCT 19868 ||||| ||||||||||| || || |||||||| ||||| ||||| |||||||| || || Sbjct 5634 CACAACATCCTTATGCACCCATTTCACATGCTAGGTGTGGCTGGTGTATTCGGCGGCTCC 5575 Query 19869 CTTTTCTCTGCTATGCACGGAAGTTTGGTTACTTCCTCGATCATCAAGGAAACAACTGAG 19928 || ||| ||||||||| || |||||| || || | || | |||||| || || Sbjct 5574 CTATTCAGTGCTATGCATGGTTCTTTGGTAACCTCTAGTTTGATTAGGGAAACCACAGAA 5515 Query 19929 GATGTATCGCAGAACTATGGCTATAAGTTCGGGCAAGATGAAGAGACATATAATATTGTC 19988 ||| ||| || | | || | ||||| |||| ||||| || |||||||| || Sbjct 5514 AATGAATCTGCTAATGAAAGTTACAGATTCGGTGAAGAGGAAGAAACTTATAATATCGTA 5455 Query 19989 GCTGCACACGGGTACTTTGGGAGATTGATATTTCAATATGCTTCTTTCAATAATTCTCGT 20048 || || || || || ||||| ||||||| || ||||||||| |||||| ||||||||| Sbjct 5454 GCCGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGT 5395 Query 20049 TCTTTACATTTCTTTCTTGCTACTTTCCCCGTGGTTGGCATATGGCTTACCTCCATGGGA 20108 |||||||| ||||| | ||| ||| || || || || || ||| | ||| | | || Sbjct 5394 TCTTTACACTTCTTCTTAGCTGCTTGGCCTGTAGTAGGTATCTGGTTCACCGCTTTAGGT 5335 Query 20109 ATCTGCACTATGGCTTTCAACCTTAATGGTTTTAACTTTAACCAGTCAGTAGTT 20162 || ||||||||||||||||| | ||||| ||||| || || || || |||||| Sbjct 5334 ATAAGCACTATGGCTTTCAACTTAAATGGATTTAATTTCAATCAATCTGTAGTT 5281 >seq11993 Length=12302 Score = 192 bits (212), Expect = 2e-44 Identities = 243/331 (73%), Gaps = 6/331 (2%) Strand=Plus/Plus Query 19956 TTCGGGCAAGATGAAGAGACATATAATATTGTCGCTGCACACGGGTACTTTGGGAGATTG 20015 ||||| ||||| ||||| || ||||||||||| || | || || || ||||| ||||| Sbjct 10384 TTCGGTCAAGAGGAAGAAACTTATAATATTGTAGCCACTCATGGTTATTTTGGCTGATTG 10443 Query 20016 ATATTTCAATATGCTTCTTTCAATAATTCTCGTTCTTTACATTTCTTTCTTGCTACTTTC 20075 || || ||||||||| |||||| ||||||| ||||||||| ||||| | ||| ||| Sbjct 10444 ATCTTCCAATATGCTAGTTTCAACAATTCTCATTCTTTACACTTCTTCTTAGCTGCTTGG 10503 Query 20076 CCCGTGGTTGGCATATGGCTTACCTCCATGGGAATCTGCACTATGGCTTTCAACCTTAAT 20135 || || || || || | | | ||| | | || ||| |||||||| |||||||| | ||| Sbjct 10504 CCTGTAGTAGGTATCTAGTTCACCACTTTAGGTATCAGCACTATGACTTTCAACTTAAAT 10563 Query 20136 GGTTTTAACTTTAACCAGTCAGTAGTTGAT-GTCAACG----GAAAGATAATCCCAACAT 20190 || ||||| | || || || ||||||||| ||||| | | || |||| || | Sbjct 10564 GGATTTAATGTCAATCAATCTGTAGTTGATAGTCAAGGTTGTGTAA-TTAATTAATACTT 10622 Query 20191 GGGCTGATGTATTAAATAGAGCTAACCTCGGATTTGAAGTTATGCACGAGCGCAATGCTC 20250 || ||||| | | || | |||||||| || | |||||| |||| || || ||||||| Sbjct 10623 GGTCTGATATTATTAACCGCGCTAACCTTGGTATGGAAGTTCTGCATGAACGTAATGCTC 10682 Query 20251 ATAACTTCCCACTTGATTTAGCTTCGGCTGA 20281 |||| ||||| || || ||||| | | ||| Sbjct 10683 ATAATTTCCCTCTAGACCTAGCTGCTGTTGA 10713 >seq3447 Length=41424 Score = 187 bits (206), Expect = 7e-43 Identities = 214/283 (76%), Gaps = 6/283 (2%) Strand=Plus/Plus Query 19656 ATGAGACCATGGATATTCGTAGCATATACAGCACCACTATCAGCAGCTCTTGCTGTG--T 19713 ||| | || ||||| || |||||| |||| || ||| |||||| | |||| | Sbjct 13300 ATGTGCCCTTGGATTGCTGTTGCATATTCAGCTCC--TATT-GCAGCTACTACTGTTATT 13356 Query 19714 TTCTCGTT-TACCCATTTGGGCAAGGGAGTTTTAGTGATGGTATGCCTCTTGGTATCTCT 19772 |||| | | |||||| |||| ||||| || ||| ||| ||||||||||| || |||||| Sbjct 13357 TTCTTGATCTACCCAATTGGTCAAGGAAGCTTTTCTGACGGTATGCCTCTAGGAATCTCT 13416 Query 19773 GGTACTTTTAACTTTATGTTCGTATTCCAAGCAGAACACAATATCCTTATGCATCCGTTC 19832 |||||||| ||||| ||| | ||||||||||| || ||||| ||||||||||| || || Sbjct 13417 GGTACTTTCAACTTCATGATTGTATTCCAAGCTGAGCACAACATCCTTATGCACCCATTT 13476 Query 19833 CACATGCTCGGTGTTGCTGGCGTATTCGGTGGATCTCTTTTCTCTGCTATGCACGGAAGT 19892 |||||||| ||||| ||||| |||||||| || || || ||| ||||||||| || | Sbjct 13477 CACATGCTAGGTGTGGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCT 13536 Query 19893 TTGGTTACTTCCTCGATCATCAAGGAAACAACTGAGGATGTAT 19935 ||||| || || | |||| |||||| || || ||| || Sbjct 13537 TTGGTAACCTCTAGTTTGATCAGGGAAACCACAGAAAATGAAT 13579 >seq2785 Length=48819 Score = 183 bits (202), Expect = 9e-42 Identities = 241/331 (73%), Gaps = 6/331 (2%) Strand=Plus/Minus Query 19956 TTCGGGCAAGATGAAGAGACATATAATATTGTCGCTGCACACGGGTACTTTGGGAGATTG 20015 ||| | ||||| ||||| || ||||||||||| || || || || || ||||| ||||| Sbjct 2786 TTCAGTCAAGAGGAAGAAACTTATAATATTGTAGCCGCTCATGGTTATTTTGGCTGATTG 2727 Query 20016 ATATTTCAATATGCTTCTTTCAATAATTCTCGTTCTTTACATTTCTTTCTTGCTACTTTC 20075 || || ||||||||| |||||| ||||||| ||||||||| ||||| | ||| ||| Sbjct 2726 ATCTTCCAATATGCTAGTTTCAACAATTCTCATTCTTTACACTTCTTCTTAGCTGCTTGG 2667 Query 20076 CCCGTGGTTGGCATATGGCTTACCTCCATGGGAATCTGCACTATGGCTTTCAACCTTAAT 20135 || || || || || | | | ||| | | || ||| |||||||| |||||||| | ||| Sbjct 2666 CCTGTAGTAGGTATCTAGTTCACCGCTTTAGGTATCAGCACTATGACTTTCAACTTAAAT 2607 Query 20136 GGTTTTAACTTTAACCAGTCAGTAGTTGAT-GTCAACG----GAAAGATAATCCCAACAT 20190 || ||||| | || || || ||||||||| || || | | || |||| || | Sbjct 2606 GGATTTAATGTCAATCAATCTGTAGTTGATAGTTAAGGTTGTGTAA-TTAATTAATACTT 2548 Query 20191 GGGCTGATGTATTAAATAGAGCTAACCTCGGATTTGAAGTTATGCACGAGCGCAATGCTC 20250 || ||||| | | || | |||||||| || | |||||| |||| || || ||||||| Sbjct 2547 GGTCTGATATTATTAACCGCGCTAACCTTGGTATGGAAGTTCTGCATGAACGTAATGCTC 2488 Query 20251 ATAACTTCCCACTTGATTTAGCTTCGGCTGA 20281 |||| ||||| || | ||||| | | ||| Sbjct 2487 ATAATTTCCCTCTAAACCTAGCTGCTGTTGA 2457 >seq3141 Length=44585 Score = 174 bits (192), Expect = 5e-39 Identities = 251/352 (71%), Gaps = 4/352 (1%) Strand=Plus/Minus Query 19290 TTTTGTGAGTGGGTCACAAGTACCGAGAACCGCCTTTATGTAGGTTGGTTTGGAGTACTT 19349 |||||| | ||| | || || || || ||||| ||||| | || |||||||| || | Sbjct 43008 TTTTGTAATTGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 42949 Query 19350 ATGATTCCTTGCTTACTAGCTGCTACTACTTGCTTTATACTCGCCTTTATCGCAGCACCG 19409 ||||| ||| ||| | |||| || || ||||| | || || || || ||||| Sbjct 42948 ATGATCCCTACTTTATTGACTGCAACATCTGTATTTATTATTGCTTTCATTGCTGCACCT 42889 Query 19410 CCTGTAGATATAGATGGCATACGTGAGCCAGTTTCCGGCTCGTTAATGTACGGAAACAAT 19469 || |||||||| ||||| || ||||| || ||||| || || ||| | |||||||||||| Sbjct 42888 CCGGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTTTACTTTACGGAAACAAT 42829 Query 19470 ATTATTTCTGGAGCAGTAGTTCCAAGCTCCAATGCAATAGGACTGCACTTTTATCCGATC 19529 ||||||||| | || | | || | | || ||||| |||||||||| || || Sbjct 42828 ATTATTTCTAGTGCCATTATCCCTACTTTTGCAGCTATAGGTTTGCACTTTTACCCAATA 42769 Query 19530 TGGGAAGCCGGCACTTTAGATGAGTGGTTATACAACGGCGGTCCATATCAACTTGTTGTC 19589 ||| |||| | | | ||||| |||||||||||||| ||||| ||| | || |||| Sbjct 42768 TGGAAAGCAGCTTCCGTTGATGAATGGTTATACAACGGTGGTCCTTATGAGCTAATTGTT 42709 Query 19590 TTCCACTTCTTAATAGGAGTAGC--AGCATACGCTGGTAGACAGTGGGAACT 19639 | ||||||||| | || ||||| | ||| | ||| | |||||||||| Sbjct 42708 CTACACTTCTTACTTGGTGTAGCTTACTATATG--GGTCGTGAGTGGGAACT 42659 >seq902 Length=93126 Score = 159 bits (176), Expect = 1e-34 Identities = 180/239 (75%), Gaps = 8/239 (3%) Strand=Plus/Minus Query 19630 AGTGGGAACTATCTTACAGATTAGGAATGAGACCATGGATATTCGTAGCATATACAGCAC 19689 |||||||||| || | | | || ||| | || ||||| || |||||| |||| | Sbjct 1478 AGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTC 1419 Query 19690 CACTATCAGCAGCTCTTGCTGTGTTTCTCGTT-TACCCATTTGGGCAAGGGAGTTTTAGT 19748 | | |||| |||||| ||||| | | |||||| |||| ||||| || ||| | Sbjct 1418 CTGTTGCAGC------TGCTGT-TTTCTTGATCTACCCAATTGGTCAAGGAAGCTTTTCT 1366 Query 19749 GATGGTATGCCTCTTGGTATCTCTGGTACTTTTAACTTTATGTTCGTATTCCAAGCAGAA 19808 || | ||||||||| || |||| ||||||||| ||||| ||| | ||||||||||| || Sbjct 1365 GACGATATGCCTCTAGGAATCTTTGGTACTTTCAACTTCATGATTGTATTCCAAGCTGAG 1306 Query 19809 CACAATATCCTTATGCATCCGTTCCACATGCTCGGTGTTGCTGGCGTATTCGGTGGATC 19867 ||||| ||||||||||| || || |||||||| ||||| ||||| |||||||| || || Sbjct 1305 CACAACATCCTTATGCACCCATTTCACATGCTAGGTGTGGCTGGTGTATTCGGCGGCTC 1247 >seq63634 Length=978 Score = 154 bits (170), Expect = 4e-33 Identities = 249/353 (71%), Gaps = 5/353 (1%) Strand=Plus/Plus Query 19290 TTTTGTGAGTGGGTCACAAGTACCGAGAACCGCCTTTATGTAGGTTGGTTTGGAGTACTT 19349 |||||| | ||| | || || || || ||||| ||||| | || |||||||| || | Sbjct 215 TTTTGTAATTGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 274 Query 19350 ATGATTCCTTGCTTACTAGCTGCTACTACTTGCTTTATACTCGCCTTTATCGCAGCACCG 19409 ||||| ||| ||| | | || | | || ||||| | || || || || ||||| Sbjct 275 ATGATCCCTACTTTATTGACCGCAATTTCTGTATTTATTATTGCTTTCATTGCTGCACCT 334 Query 19410 CCTGTAGATATAGATGGCATACGTGAGCCAGTTTCCGGCTCGTTAATGTACGGAAACAA- 19468 || ||| |||| ||||| || ||||| || ||||| || || ||| | || |||||||| Sbjct 335 CCGGTACATATTGATGGTATTCGTGAACCTGTTTCTGGATCTTTACTTTAGGGAAACAAA 394 Query 19469 TATTATTTCTGGAGCAGTAGTTCCAAGCTCCAATGCAATAGGACTGCACTTTTATCCGAT 19528 |||||||||||| || | | || | || || ||||| |||||||||| || || Sbjct 395 TATTATTTCTGGTGCCATTATCCCTACTTCTGCAGCTATAGGTTTGCACTTTTACCCAAT 454 Query 19529 CTGGGAAGCCGGCACTTTAGATGAGTGGTTATACAACGGCGGTCCATATCAACTTGTTGT 19588 |||||||| | | | ||||| || ||||||||||| ||||| | | | || |||| Sbjct 455 ATGGGAAGCGGCTTCCGTCGATGAATGATTATACAACGGTGGTCCTTGTGAGCTAATTGT 514 Query 19589 CTTCCACTTCTTAATAGGAGTAGC-AGC-ATACGCTGGTAGACAGTGGGAACT 19639 | ||||||||| | || | ||| || ||| | ||| | |||||||||| Sbjct 515 TCTACACTTCTTACTTGGTGCAGCTTGCTATATG--GGTCGTGAGTGGGAACT 565 >seq31866 Length=2350 Score = 129 bits (142), Expect = 2e-25 Identities = 143/191 (75%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 19406 ACCGCCTGTAGATATAGATGGCATACGTGAGCCAGTTTCCGGCTCGTTAATGTACGGAAA 19465 ||| || |||||||| ||||| || ||||| || ||||| || || ||| | |||||||| Sbjct 1809 ACCTCCGGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTTTACTTTACGGAAA 1868 Query 19466 CAATATTATTTCTGGAGCAGTAGTTCCAAGCTCCAATGCAATAGGACTGCACTTTTATCC 19525 ||||||||||||||| || | | || | || || ||||| |||||||||| || Sbjct 1869 CAATATTATTTCTGGTGCCATTATCCCTACTTCTGCAGCTATAGGTTTGCACTTTTACCC 1928 Query 19526 GATCTGGGAAGCCGGCACTTTAGATGAGTGGTTATACAACGGCGGTCCATATCAACTTGT 19585 || |||||||| | | | ||||| |||||||||||||| ||||| ||| | || | Sbjct 1929 AATATGGGAAGCGGCTTCCGTTGATGAATGGTTATACAACGGTGGTCCTTATGAGCTAAT 1988 Query 19586 TGTCTTCCACT 19596 ||| | |||| Sbjct 1989 TGTTCTACACT 1999 >seq140248 Length=342 Score = 107 bits (118), Expect = 6e-19 Identities = 91/112 (81%), Gaps = 0/112 (0%) Strand=Plus/Minus Query 19962 CAAGATGAAGAGACATATAATATTGTCGCTGCACACGGGTACTTTGGGAGATTGATATTT 20021 ||||| ||||| || |||||||| || || || || || || ||||| |||||||||| Sbjct 342 CAAGAGGAAGAAACTTATAATATCGTAGCCGCTCATGGTTATTTTGGCCGATTGATATTC 283 Query 20022 CAATATGCTTCTTTCAATAATTCTCGTTCTTTACATTTCTTTCTTGCTACTT 20073 ||||||||| |||||| ||||||||||||||||| ||||| | ||| ||| Sbjct 282 CAATATGCTAGTTTCAACAATTCTCGTTCTTTACACTTCTTCTTAGCTGCTT 231 >seq136643 Length=350 Score = 105 bits (116), Expect = 2e-18 Identities = 158/220 (72%), Gaps = 6/220 (3%) Strand=Plus/Minus Query 20067 GCTACTTTCCCCGTGGTTGGCATATGGCTTACCTCCATGGGAATCTGCACTATGGCTTTC 20126 ||| ||| || || || || || | | | ||| | | || ||| |||||||||||||| Sbjct 350 GCTGCTTGGCCTGTAGTAGGTATCTAGTTCACCACTTTAGGTATCAGCACTATGGCTTTC 291 Query 20127 AACCTTAATGGTTTTAACTTTAACCAGTCAGTAGTTGAT-GTCAA---CGGAAAGATAAT 20182 ||| | ||||| ||||| || | || || ||||||||| ||||| || | |||| Sbjct 290 AACTTAAATGGATTTAATTTCAGTCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAAT 231 Query 20183 CCCAACATGGGCTGAT-GTATTAAATAGAGCTAACCTCGGATTTGAAGTTATGCACGAGC 20241 || ||||||||| |||||| | | ||| |||| || | |||||| |||| || | Sbjct 230 TAATACTTGGGCTGATATTATTAACT-GCGCTGACCTTGGTATGGAAGTTCTGCAAGAAC 172 Query 20242 GCAATGCTCATAACTTCCCACTTGATTTAGCTTCGGCTGA 20281 | ||||||||||| ||||| || || ||||| | | ||| Sbjct 171 GTAATGCTCATAATTTCCCTCTAGACCTAGCTACTGTTGA 132 >seq105467 Length=471 Score = 104 bits (114), Expect = 7e-18 Identities = 168/239 (70%), Gaps = 6/239 (3%) Strand=Plus/Plus Query 20048 TTCTTTACATTTCTTTCTTGCTACTTTCCCCGTGGTTGGCATATGGCTTACCTCCATGGG 20107 ||||||||| ||||| | ||| ||| || || || || || | | | ||| | | || Sbjct 3 TTCTTTACACTTCTTCTTAGCTGCTTGGCCTGTAGTAGGTATCTAGTTCACCGCTTTAGG 62 Query 20108 AATCTGCACTATGGCTTTCAACCTTAATGGTTTTAACTTTAACCAGTCAGTAGTTGAT-G 20166 ||| |||||||| |||||||| | ||||| ||||| | || || || ||||||||| | Sbjct 63 TATCAGCACTATGACTTTCAACTTAAATGGATTTAATGTCAATCAATCTGTAGTTGATAG 122 Query 20167 TCAACG----GAAAGATAATCCCAACATGGGCTGATGTATTAAATAGAGCTAACCTCGGA 20222 | || | | || |||| || ||| ||||| | | || | |||||||| || Sbjct 123 TTAAGGTTGTGTAAT-TAATTAATACTTGGTCTGATATTATTAACCGCGCTAACCTTGGT 181 Query 20223 TTTGAAGTTATGCACGAGCGCAATGCTCATAACTTCCCACTTGATTTAGCTTCGGCTGA 20281 | |||||| |||| || || ||||||||||| ||||| || | ||||| | | ||| Sbjct 182 ATGGAAGTTCTGCATGAACGTAATGCTCATAATTTCCCTCTAAACCTAGCTGCTGTTGA 240 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143913524399232