Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rosa_20x_20damascena_20[genbank_20GCA_5F001662545.1_202016-06-13] 307,872 sequences; 711,719,955 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq181 122 9e-23 seq171 120 3e-22 seq21550 111 2e-19 seq135 111 2e-19 seq2880 109 6e-19 seq459 107 2e-18 seq56994 104 3e-17 seq13557 100 3e-16 seq400 98.7 1e-15 seq55 93.3 5e-14 seq56 89.7 6e-13 seq30148 86.0 7e-12 seq707 86.0 7e-12 seq3539 82.4 8e-11 >seq181 Length=165841 Score = 122 bits (134), Expect = 9e-23 Identities = 160/215 (74%), Gaps = 10/215 (5%) Strand=Plus/Plus Query 41999 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 42058 ||| | ||||| || |||||||| ||||| || ||||| || |||||||| | || || Sbjct 136545 CACAAGATGCAGAGTACTCTCCTTCTGAATGTTATAATCCGCTAGAGTCCGGCCATCCTC 136604 Query 42059 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCAT 42118 | ||||| |||||||||||||| | ||||||||| | ||| | | |||||||| | | Sbjct 136605 CAATTGCTTCCCAGCGAATATGAGCCTCTGCTGGTCCGGTGGAATCCCCTCCTTGT-CTT 136663 Query 42119 GATTTTTTG-TTTGAGCGTCG-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATG 42173 || |||| | |||| ||| | | | ||| || |||| ||||| || | ||||| Sbjct 136664 GAATTTTCGCCTTGA-CGTTGTCAATCGTATCGGAGCTC---TCCACCTCCAGAGTGATC 136719 Query 42174 GTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || || || || || ||||| |||||||||||||| Sbjct 136720 GTCTTTCCTGTCAGAGTCTTCACAAAGATTTGCAT 136754 Score = 95.1 bits (104), Expect = 1e-14 Identities = 162/231 (70%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 ||||| || | ||| | |||| ||| | || |||||| || || ||||| || || Sbjct 136984 CCTCCCCTGAGACGGAGGACCAGATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGCG 137043 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 || || || |||| || |||||||| || ||||| ||||| | ||||||||||| || Sbjct 137044 AGGGTGCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGCCTCTGCTGGTCGGGAGGG 137103 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATTC 42157 | || ||||||||| ||| || |||| ||| | | | ||||| |||| || Sbjct 137104 ATGCCTTCCTTGTCCTGGATCTTGGCCTTGA-CGTTGTCGATGGTGTCAGAGCTC---TC 137159 Query 42158 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || |||| |||||||| || || || || || || || |||| ||||| Sbjct 137160 GACCTCGAGGGTGATGGTCTTACCGGTCAGGGTTTTCACGAAGACCTGCAT 137210 Score = 89.7 bits (98), Expect = 6e-13 Identities = 152/214 (71%), Gaps = 10/214 (5%) Strand=Plus/Plus Query 42000 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 42059 |||| ||| | ||| |||||| || ||||||||||| |||||||||| | || || Sbjct 158676 ACCAGATGAAGAGTGGACTCCTTCTGGATATTGTAATCCGCCAGAGTCCTGCCATCCTCC 158735 Query 42060 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATG 42119 | |||||| || || || || | | |||||| || | || | | |||||| ||| || Sbjct 158736 AACTGCTTTCCGGCAAAGATCAACCTCTGCTGATCCGGGGGAATCCCCTCCTTATCC-TG 158794 Query 42120 ATTTTTTG-TTTGAGCGTCG-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGG 42174 | | || | |||| ||| | | | |||||| |||| ||||| || | ||||||| Sbjct 158795 AATCTTGGCCTTGA-CGTTGTCGATCGTGTCGGAGCTC---TCCACCTCCAGGGTGATGG 158850 Query 42175 TTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 | || ||||| | ||||| || ||||| ||||| Sbjct 158851 TCTTCCCCGTCAAAGTCTTGACGAAGATCTGCAT 158884 Score = 86.0 bits (94), Expect = 7e-12 Identities = 147/212 (69%), Gaps = 6/212 (3%) Strand=Plus/Plus Query 42000 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 42059 ||||| || | ||| |||||| || ||||| ||||||||||| || || | || || Sbjct 158448 ACCAAGTGGAGGGTGGACTCCTTCTGGATATTATAATCAGCCAGGGTACGACCATCCTCG 158507 Query 42060 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATG 42119 |||||||| || || || || || | ||||||||| | ||| | | ||||||||| | Sbjct 158508 AGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCCGGTGGGATCCCTTCCTTGTCCTGG 158567 Query 42120 ATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTT 42176 || || ||||| | | | || || |||| ||||| || | || || || Sbjct 158568 ATCTTGGCTTTGACATTATCAATGGTATCGGAGCTC---TCCACCTCCAGAGTAATTGTC 158624 Query 42177 TTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 ||||| || || ||||| || || || ||||| Sbjct 158625 TTGCCAGTCAGAGTCTTCACGAAAATCTGCAT 158656 Score = 82.4 bits (90), Expect = 8e-11 Identities = 146/212 (69%), Gaps = 6/212 (3%) Strand=Plus/Plus Query 42000 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 42059 ||||| ||||| ||| ||||| || ||||||||||| || || || | |||| || Sbjct 136774 ACCAAGTGCAAAGTGGATTCCTTCTGGATATTGTAATCGGCGAGGGTTCTGCCGTCTTCG 136833 Query 42060 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATG 42119 || ||||| || ||||| || | | ||||||||| | || | | ||||| ||| | Sbjct 136834 AGTTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGGGGAATTCCTTCCTTATCCTGG 136893 Query 42120 ATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTT 42176 ||||| |||| | | | ||||| |||| || || |||| ||||| || Sbjct 136894 ATTTTAGCCTTGACGTTATCGATGGTGTCGGAGCTC---TCAACCTCGAGAGTGATCGTC 136950 Query 42177 TTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 ||||| || || || || || ||||| ||||| Sbjct 136951 TTGCCGGTGAGAGTTTTGACGAAGATCTGCAT 136982 >seq171 Length=169594 Score = 120 bits (132), Expect = 3e-22 Identities = 161/220 (73%), Gaps = 8/220 (4%) Strand=Plus/Minus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 ||| | |||||| |||| ||| |||||| |||||||| || || || || |||| | Sbjct 166483 ACGAAGCACCAAGTGCAGAGTGGACTCCTTCTGAATATTATAGTCGGCGAGTGTCCTTCC 166424 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 || || ||||||||||| || || || | || ||||||||| | || | | ||| || Sbjct 166423 ATCCTCAAGCTGCTTACCTGCAAAAATCAATCTCTGCTGGTCTGGGGGAATACCCTCTTT 166364 Query 42113 GTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCG 42168 |||| ||| |||| | ||| | | | | |||||| ||| |||||| || | | Sbjct 166363 GTCC-TGAATTTTAGCTTTCACATTATCAATCGTGTCAGAGCT---TTCCACTTCCAGAG 166308 Query 42169 TGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 ||||||||||||| || || ||||| |||||||||||||| Sbjct 166307 TGATGGTTTTGCCGGTGAGGGTCTTGACAAAGATTTGCAT 166268 Score = 113 bits (124), Expect = 5e-20 Identities = 157/219 (72%), Gaps = 6/219 (3%) Strand=Plus/Minus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 ||| | ||| ||||| | || ||||||||||||||||||||||||||| || || | Sbjct 166027 ACGGAGCACTAAATGAAGGGTCGACTCCTTTTGAATATTGTAATCAGCCAGGGTGCGGCC 165968 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 || || || ||||| ||||| || || |||| ||||||||| | ||| | | ||| || Sbjct 165967 ATCCTCAAGTTGCTTTCCAGCAAAGATAAGTCTCTGCTGGTCTGGTGGGATACCCTCTTT 165908 Query 42113 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCG---CTCGATTCCACATCGACCGT 42169 ||| ||| ||| || | | | | |||||| ||| || || || | || Sbjct 165907 GTCTTGGATCTTTGCCTTCACATTGTCAATGGTGTCGGAACTC---TCAACCTCCAAGGT 165851 Query 42170 GATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 |||||||| || || || ||||| |||||||||||||| Sbjct 165850 TATGGTTTTCCCAGTGAGAGTCTTAACAAAGATTTGCAT 165812 Score = 89.7 bits (98), Expect = 6e-13 Identities = 137/194 (71%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 ||||||||||||||||| ||||| || || || | || || |||||||| ||||| || Sbjct 165774 TCCTTTTGAATATTGTAGTCAGCGAGGGTGCGTCCATCCTCGAGCTGCTTGCCAGCAAAA 165715 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 42137 || || | |||||||| | || | || |||||||| |||||| ||||| | Sbjct 165714 ATCAGCCTTTGCTGGTCCGGGGGGATGCCTTCCTTGTCTTGGATTTTGGCTTTGACATTA 165655 Query 42138 GCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTT 42194 | | ||||| ||| ||| || || | || ||||| ||||| || || || || Sbjct 165654 TCTATGGTGTCAGAGCT---TTCAACCTCAAGGGTTATGGTCTTGCCAGTGAGAGTTTTG 165598 Query 42195 ACAAAGATTTGCAT 42208 || ||||| ||||| Sbjct 165597 ACGAAGATCTGCAT 165584 Score = 87.8 bits (96), Expect = 2e-12 Identities = 151/217 (70%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 |||||||||||| || | || || || || || |||||||| || ||||| || | Sbjct 166255 ACGCAACACCAAGTGAAGAGTTGATTCTTTCTGGATGTTGTAATCCGCAAGAGTGCGACC 166196 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 || |||| ||| || || || || ||||| | ||||||||| | || | || |||||| Sbjct 166195 ATCCTCTAACTGTTTCCCTGCAAAGATGAGCCTCTGCTGGTCTGGAGGAATGCCCTCCTT 166136 Query 42113 GTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGA 42171 ||| ||| | |||| |||| | | | || || ||| || || | |||| Sbjct 166135 ATCC-TGAATCTTTGCCTTGACATTATCTATTGTATCTGAACTTTCAACCTCCAAGGTGA 166077 Query 42172 TGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 |||| || || || || || || |||||||||||||| Sbjct 166076 TGGTCTTTCCGGTGAGGGTTTTGACAAAGATTTGCAT 166040 >seq21550 Length=4752 Score = 111 bits (122), Expect = 2e-19 Identities = 158/220 (72%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 ||| | ||||| || | ||| |||||| || || ||||| || || || || || | Sbjct 2414 ACGAAGCACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGCTAGGGTTCGGCC 2473 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 ||| ||||||||||| || ||||| ||||| | ||||||||| | || | || |||||| Sbjct 2474 GTCCTCTAGCTGCTTTCCGGCGAAGATGAGCCTCTGCTGGTCCGGCGGGATGCCCTCCTT 2533 Query 42113 GTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGA 42171 || | ||| | || | | | ||| | | | ||||| ||| ||||| || | |||| Sbjct 2534 GT-CTTGAATCTTGGCCTTAACGTTGTCGATGGTGTCCGACGACTCCACCTCCAGGGTGA 2592 Query 42172 TGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTT 42211 | || || |||||||| || || || ||||| ||||| || Sbjct 2593 TCGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATCTT 2632 >seq135 Length=179161 Score = 111 bits (122), Expect = 2e-19 Identities = 166/232 (72%), Gaps = 8/232 (3%) Strand=Plus/Plus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 |||||| | | ||| | |||| ||| | || |||||| || || ||||| || || Sbjct 30926 ACCTCCCCGGAGACGGAGGACCAGATGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGC 30985 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 || ||||| |||| || |||||||| || ||||| ||||| ||||||||||| | || Sbjct 30986 GAGGGTCCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGCGG 31045 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATT 42156 | || ||||||||| |||||| |||| ||| | | | ||||| |||| | Sbjct 31046 GATGCCCTCCTTGTCTTGGATTTTGGCCTTGA-CGTTGTCGATGGTGTCGGAGCTC---T 31101 Query 42157 CCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 | || |||| |||||||| ||||| || || || || || ||||| ||||| Sbjct 31102 CGACCTCGAGGGTGATGGTCTTGCCGGTCAGGGTTTTGACGAAGATCTGCAT 31153 Score = 86.0 bits (94), Expect = 7e-12 Identities = 139/196 (71%), Gaps = 8/196 (4%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||||||||| ||||||||||||| ||| || | || || | ||||| || || || Sbjct 30278 CTCCTTTTGAATGTTGTAATCAGCCAAAGTGCGGCCATCCTCCAATTGCTTTCCTGCAAA 30337 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 42135 || | | |||||| || | ||| | | |||||||| | ||| | || | ||||| Sbjct 30338 GATCAACCTCTGCTGATCAGGTGGGATCCCCTCCTTGT-CTTGAATCTTCGCTTTGACAT 30396 Query 42136 TCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 42192 | | | || || |||| || || || | ||||| ||||| ||||| || |||| Sbjct 30397 TGTCAATAGTATCGGAGCTC---TCAACCTCCAGAGTGATCGTTTTCCCCGTCAGAGTCT 30453 Query 42193 TTACAAAGATTTGCAT 42208 | |||||||| ||||| Sbjct 30454 TCACAAAGATCTGCAT 30469 >seq2880 Length=47671 Score = 109 bits (120), Expect = 6e-19 Identities = 147/202 (73%), Gaps = 2/202 (1%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| || || || || || |||| || |||||||| || ||||| Sbjct 12886 CTCCTTCTGGATGTTGTAGTCGGCTAGGGTTCGGCCGTCCTCGAGCTGCTTTCCGGCGAA 12945 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 ||||| | |||||||| | ||| | || ||||||||| ||| | || | | | | Sbjct 12946 GATGAGCCTCTGCTGGTTCGGTGGGATGCCCTCCTTGTCT-TGAATCTTGGCCTTCACAT 13004 Query 42137 CGCC-ACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 42195 | | | ||||| ||||||||| || | ||||| || || |||||||| || || | Sbjct 13005 TGTCGATGGTGTCCGACGATTCCACCTCCAGGGTGATCGTCTTCCCCGTTAGGGTTTTCA 13064 Query 42196 CAAAGATTTGCATTTTCACGCC 42217 | ||||||||||| ||| |||| Sbjct 13065 CGAAGATTTGCATCTTCTCGCC 13086 >seq459 Length=124062 Score = 107 bits (118), Expect = 2e-18 Identities = 163/231 (71%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 || || | || ||| | ||||||||||| || |||||| ||||| ||||| || ||| Sbjct 120812 CCACCACGTAGACGGAGCACCAAATGCAGAGTCGACTCCTTCTGAATGTTGTAGTCTGCC 120753 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 || |||| | || || |||||||| || || || ||||| | ||||||||| | || Sbjct 120752 AGTGTCCTACCATCTTCAAGCTGCTTTCCTGCAAAGATGAGCCTCTGCTGGTCTGGGGGA 120693 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCC 42158 | || || |||||| ||| ||| |||| | | | || || ||| |||| Sbjct 120692 ATGCCTTCTTTGTCCTGGATCTTTGCCTTGACATTGTCAATTGTATCAGAGCT---TTCC 120636 Query 42159 ACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 42209 || || | ||||| || || || || || ||||| ||||||||||||||| Sbjct 120635 ACCTCCAAGGTGATTGTCTTCCCAGTAAGGGTCTTCACAAAGATTTGCATT 120585 Score = 100 bits (110), Expect = 3e-16 Identities = 150/212 (71%), Gaps = 6/212 (3%) Strand=Plus/Minus Query 42000 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 42059 ||||| || | ||| ||||||||| ||||||||||| || || || || | || ||| Sbjct 120566 ACCAAGTGAAGGGTGGACTCCTTTTGGATATTGTAATCTGCAAGGGTGCGACCATCCTCT 120507 Query 42060 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATG 42119 ||||| || ||||| || ||||| | |||||| || | || | | |||||||||| | Sbjct 120506 AGCTGTTTGCCAGCAAAGATGAGCCTCTGCTGATCTGGGGGGATACCCTCCTTGTCCTGG 120447 Query 42120 ATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTT 42176 || ||| |||| | | | || || |||| || || || | |||||||| Sbjct 120446 ATCTTTGCCTTGACATTATCGATTGTATCAGAGCTC---TCGACCTCCAAGGTGATGGTC 120390 Query 42177 TTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || || || || ||||| |||||||| ||||| Sbjct 120389 TTCCCTGTGAGAGTCTTGACAAAGATCTGCAT 120358 Score = 100 bits (110), Expect = 3e-16 Identities = 142/196 (72%), Gaps = 8/196 (4%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || |||||||| || ||||||| | | || || |||||||||||||| || Sbjct 121005 CTCCTTCTGGATGTTGTAATCCGCTAGAGTCCTCCCATCTTCAAGCTGCTTACCAGCAAA 120946 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 42135 |||||| | ||||||||| | || | || |||||||||| ||| | |||| ||| | Sbjct 120945 TATGAGCCTCTGCTGGTCCGGAGGAATGCCCTCCTTGTCC-TGAATCTTTGCTTTCACAT 120887 Query 42136 TCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 42192 | | | || || ||| || || || | || ||||| || || || || |||| Sbjct 120886 TATCAATTGTATCAGAACTC---TCTACCTCCAAGGTTATGGTCTTTCCAGTGAGGGTCT 120830 Query 42193 TTACAAAGATTTGCAT 42208 | ||||| || ||||| Sbjct 120829 TCACAAAAATCTGCAT 120814 >seq56994 Length=1141 Score = 104 bits (114), Expect = 3e-17 Identities = 143/196 (73%), Gaps = 8/196 (4%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| || || || || || |||| || ||||||||||| ||||| Sbjct 4 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCGAGCTGCTTACCGGCGAA 63 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 ||||| | ||||||||| | || | || |||||||||| ||| || |||| ||| Sbjct 64 GATGAGCCTCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGT 122 Query 42137 CG-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 42192 | | | ||||| |||| || || |||| |||||||| ||||| || || || | Sbjct 123 TGTCGATGGTGTCAGAGCTC---TCGACCTCGAGGGTGATGGTCTTGCCGGTCAGGGTTT 179 Query 42193 TTACAAAGATTTGCAT 42208 | || ||||| ||||| Sbjct 180 TCACGAAGATCTGCAT 195 >seq13557 Length=10351 Score = 100 bits (110), Expect = 3e-16 Identities = 142/196 (72%), Gaps = 8/196 (4%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||||||||| ||||||||||||| ||| || | || || || ||||| || || || Sbjct 8490 CTCCTTTTGAATGTTGTAATCAGCCAAAGTGCGGCCATCCTCCAGTTGCTTTCCTGCAAA 8431 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 42135 || | | ||||||||| | ||| | | |||||||| | ||| | |||| ||||| Sbjct 8430 GATCAACCTCTGCTGGTCTGGTGGGATACCCTCCTTGT-CTTGAATCTTTGCTTTGACAT 8372 Query 42136 TCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 42192 | | | || || |||| || || || | ||||| ||||| ||||| || |||| Sbjct 8371 TGTCAATAGTATCCGAGCTC---TCAACCTCCAGAGTGATCGTTTTCCCCGTCAGAGTCT 8315 Query 42193 TTACAAAGATTTGCAT 42208 | |||||||| ||||| Sbjct 8314 TCACAAAGATCTGCAT 8299 >seq400 Length=129899 Score = 98.7 bits (108), Expect = 1e-15 Identities = 141/195 (72%), Gaps = 8/195 (4%) Strand=Plus/Plus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 ||||| || || ||||| || || || || || |||| || |||||||| || |||||| Sbjct 14517 TCCTTCTGGATGTTGTAGTCGGCGAGGGTACGGCCGTCCTCGAGCTGCTTTCCGGCGAAT 14576 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 42137 ||||| | |||||| || | || | || ||||||||| ||| || |||| ||| Sbjct 14577 ATGAGCCTCTGCTGATCAGGAGGGATGCCCTCCTTGTCTTGGATCTTGGCCTTGA-CGTT 14635 Query 42138 G-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 42193 | | | ||||| |||| || || |||| |||||||| ||||||||||| || || Sbjct 14636 GTCGATGGTGTCGGAGCTC---TCGACCTCGAGGGTGATGGTCTTGCCCGTTAGGGTTTT 14692 Query 42194 TACAAAGATTTGCAT 42208 || || || ||||| Sbjct 14693 CACGAATATCTGCAT 14707 >seq55 Length=242041 Score = 93.3 bits (102), Expect = 5e-14 Identities = 138/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 ||||||||| || ||||| ||||| || || || | || || |||||||| ||||| || Sbjct 38213 CTCCTTTTGGATGTTGTAGTCAGCTAGGGTTCGGCCATCCTCAAGCTGCTTGCCAGCAAA 38272 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 || || ||||||||||| | || | || ||||| ||| || | || | | | ||| Sbjct 38273 GATCAGACGCTGCTGGTCTGGGGGAATGCCTTCCTTATCC-TGGATCTTGGCCTTAACGT 38331 Query 42137 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 42195 | | | ||||| || ||||| || | ||||| || ||||| || || ||||| | Sbjct 38332 TGTCAATGGTGTCAGAAGACTCCACCTCAAGGGTGATAGTCTTGCCGGTGAGGGTCTTCA 38391 Query 42196 CAAAGATTTGCAT 42208 | || |||||||| Sbjct 38392 CGAAAATTTGCAT 38404 >seq56 Length=241350 Score = 89.7 bits (98), Expect = 6e-13 Identities = 151/217 (70%), Gaps = 4/217 (2%) Strand=Plus/Minus Query 42000 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 42059 |||||||||| || || || ||||| ||||||| ||| |||| || | || || Sbjct 13283 ACCAAATGCAGAGTTGATTCTTTCTGAATGTTGTAATTAGCAGGAGTACGACCATCCTCG 13224 Query 42060 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATG 42119 || ||||| | ||| ||||| ||||||||| | || | || ||||| ||| || Sbjct 13223 AGTTGCTTTCTGATGAAAATGAGCATCTGCTGGTCCGGGGGGATACTTTCCTTCTCCTTG 13164 Query 42120 ATTTTTTGTTTGA---GCGTCGCC-ACCGTGTCGCTCGATTCCACATCGACCGTGATGGT 42175 || | |||| |||| | | | |||||||| ||||| || || | |||||||| Sbjct 13163 ATCCTGGCCTTGACAAGCGTTGTCGATAGTGTCGCTAGATTCAACCTCAAGGGTGATGGT 13104 Query 42176 TTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTTC 42212 || || |||| || || ||||||||||| || ||| Sbjct 13103 CTTCCCGGTTACTGTTTTCACAAAGATTTGAATCTTC 13067 >seq30148 Length=2559 Score = 86.0 bits (94), Expect = 7e-12 Identities = 98/132 (74%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 ||| | ||||| || | ||| |||||| || || ||||| || || ||||| || | Sbjct 182 ACGGAGCACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGGCC 123 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 ||| || |||||||| || ||||| || || ||||||||||| | || | || |||||| Sbjct 122 GTCCTCGAGCTGCTTTCCGGCGAAGATCAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTT 63 Query 42113 GTCCATGATTTT 42124 |||| ||| || Sbjct 62 GTCCTGGATCTT 51 >seq707 Length=103418 Score = 86.0 bits (94), Expect = 7e-12 Identities = 136/194 (70%), Gaps = 1/194 (1%) Strand=Plus/Minus Query 42019 CCTTT-TGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 ||||| || || ||||| || |||| || || |||| || |||||||| || ||||| Sbjct 63103 CCTTTCTGGATGTTGTAGTCGGCCAAGGTGCGGCCGTCTTCGAGCTGCTTTCCGGCGAAA 63044 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 42137 || | ||||||||||| | || | || |||||||| ||| || |||| | Sbjct 63043 ATCAAACGCTGCTGGTCCGGAGGAATGCCTTCCTTGTCTTGGATCTTGGCCTTGACATTG 62984 Query 42138 GCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 42197 | | |||||||| || || |||| |||||||| || |||||||| || || || Sbjct 62983 TCGATGGTGTCGCTGCTCTCGACCTCGAGAGTGATGGTCTTCCCCGTTAGGGTTTTCACG 62924 Query 42198 AAGATTTGCATTTT 42211 || || ||||| || Sbjct 62923 AAAATCTGCATCTT 62910 >seq3539 Length=40568 Score = 82.4 bits (90), Expect = 8e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 ||||| || | | |||||||| || | ||| |||||||||||| || ||||| || Sbjct 16885 CCTCCCCTCAGCCTCAACACCAGGTGAAGAGTGGACTCCTTTTGAATGTTATAATCCGCA 16826 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 ||||| | | || || | ||||| ||||| || || |||| ||| || || | || Sbjct 16825 AGAGTTCTGCCATCTTCCAATTGCTTGCCAGCAAAGATCAGTCTCTGTTGATCAGGAGGG 16766 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 42161 | || || || ||| ||| || ||||| | | | || ||| | || || Sbjct 16765 ATGCCTTCTTTATCCTGGATCTTGGCTTTGACATTGTCGATGGTATCGTTACCCTCAACC 16706 Query 42162 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTT 42211 |||| |||||||| || || ||||| || || || || |||||||| || Sbjct 16705 TCGAGAGTGATGGTCTTCCCAGTTAGAGTTTTCACGAAAATTTGCATGTT 16656 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 541122299860480