Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rosa_20x_20damascena_20[genbank_20GCA_5F001662545.1_202016-06-13] 307,872 sequences; 711,719,955 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq5638 313 3e-80 seq11001 280 2e-70 seq251 197 2e-45 seq11993 174 2e-38 seq2785 174 2e-38 seq3141 150 2e-31 seq3447 147 3e-30 seq902 129 7e-25 seq31866 118 1e-21 seq105467 116 4e-21 seq136643 100 3e-16 seq4134 95.1 1e-14 >seq5638 Length=27578 Score = 313 bits (346), Expect = 3e-80 Identities = 591/863 (68%), Gaps = 20/863 (2%) Strand=Plus/Minus Query 171829 TGGGTAACCTCAACTAACAACAGAATTTATGTTGGTTGGTTCGGTGTACTCATGATCCCA 171888 ||| ||||| |||| | ||| |||| |||| || || ||||| | |||||||| Sbjct 22443 TGGATAACCAGAACTGA-AACTATCTTTACATTGGATGATTTGGTGTTTTGATGATCCCT 22385 Query 171889 TGTTTGCTCACAGCAGCAGCATGCTTCATCGTTGCATTCATTGCAGCACCTCCTGTCGAT 171948 ||| | || ||| | | || || |||| |||||||| |||| | | || ||| Sbjct 22384 ACTTTATTGACCGCAACTTCTGTATTTATTATTGCTTTCATTGCTGCACTTTCGGTAGAT 22325 Query 171949 ATCGACGGAATCAGAGAACCAGTTGCGGGTTCTTTCTTATATGGTAACAACATCATCTCT 172008 || || || || | ||||| ||| | | ||||| | || || ||||| || || ||| Sbjct 22324 ATTGATGGTATTCGCGAACCTGTTTCTTGATCTTTACTTTACGGAAACAATATTATTTCT 22265 Query 172009 GGTGCAGTTGTTCCATCATCAAACGCA---ATAGGTCTCCACTTCTACCCTATCTGGGAA 172065 ||||| ||| | || | || ||| |||||| | ||||| ||||| || |||||| Sbjct 22264 GGTGCCGTTATCCCTACTTCT---GCATATATAGGTTTGCACTTTTACCCAATATGGGAA 22208 Query 172066 GCAGCAACCGTAGATGAATGGTTGTACAATGGTGGTCCTTATCAGTTGGTAATCTTCCAC 172125 | || |||| ||||||| || |||||||||||||||||| || | | | | ||| Sbjct 22207 GTGGCTTCCGTTGATGAATAATTATACAATGGTGGTCCTTATGAGCTAATTGTTCTACAC 22148 Query 172126 TTCCTTATCG--GTATCTCAGCATACATGGGAAGACAGTGGGAACTATCATACAGATTAG 172183 ||| | | | ||| || || || ||||| | ||||| |||| || || Sbjct 22147 TTCATACTTGTTGTAGCTT-GC-TATATGGGTCGTGAGTGGAAACTT------AGTTTTC 22096 Query 172184 GTATGAGAC---CATGGATATGTGTAGCATATTCAGCACCTGTATCAGCAGCATTTGCTG 172240 || || | | | ||||| ||| ||||||||||| ||||| |||| | ||||| Sbjct 22095 GTCTGGGGCGCCCTTGGATTGTTGTTGCATATTCAGCTCCTGTTGCAGCTGTTACTGCTG 22036 Query 172241 TGTTCCTTGTGTATCCATTCGGTCAGGGTTCATTCTCTGATGGTATGCCACTAGGTATCT 172300 | ||| | | || ||| | ||||| || || ||||| |||||||| | ||| |||| Sbjct 22035 TTTTCTTGATCTACCCAATTGGTCAAGGAAGCTTTTCTGACGGTATGCCGCGAGGAATCT 21976 Query 172301 CAGGTACGTTCAACTTTATGTTCGTGTTCCAAGCAGAGCATAACATTCTAATGCATCCTT 172360 | ||||| |||||||| ||| | || |||||||| ||||| ||||| || ||||| || | Sbjct 21975 CTGGTACTTTCAACTTCATGATTGTATTCCAAGCTGAGCACAACATCCTTATGCACCCAT 21916 Query 172361 TCCACATGGCAGGAGTAGCAGGAATGTTTGGAGGATCTTTATTCTCAGCAATGCACGGTT 172420 | |||||| ||| || | || | || | || || ||||| || ||||| |||| Sbjct 21915 TTCACATGCTAGGTGTGGTTGGTGTATTCGACGGCTCCCTATTCAGTGCTATGCAAGGTT 21856 Query 172421 CTTTAGTTACATCTTCTCTAATCAGAGAGACAACTGAAGCAGAATCACAGAACTACGGAT 172480 |||| || | ||| | | ||||| || || || ||| | || || | || | Sbjct 21855 CTTTGGTAATCTCTAGTTTGATCAGGGAAACCACAGAAAATGTATTTGCTAATGAAGGTT 21796 Query 172481 ACAAGTTCGGACAAGAAGAAGAAACATACAACATAGTAGCAGCACACGGTTACTTTGGTC 172540 ||| |||| ||||| |||||||| || || || ||| ||| || ||||| ||||| | Sbjct 21795 ACAGATTCGATCAAGAGGAAGAAACTTATAATATCGTACTAGCTCATGGTTATTTTGGCC 21736 Query 172541 GTCTTATCTTCCAGTATGCTTCTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTAGCAG 172600 | | |||||||| |||||| ||||||||| || | | | ||||||||| |||| | Sbjct 21735 GATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACACTTCTTCTTAGCTG 21676 Query 172601 TTTTCCCTGTTGTATGTGTATGGTTAACCTCTATGGGTATCTGTACAATGGCATTCAACC 172660 || ||||| ||| || | | ||| ||| || | |||| | || ||| | |||||| Sbjct 21675 CTTGGCCTGTAGTAGGTATCTAGTTCACCGCTTTAAGTATTAGCACTATGACTTTCAACT 21616 Query 172661 TTAACGGTTTCAACTTCAACCAA 172683 | || || || || ||||| ||| Sbjct 21615 TAAATGGATTTAATTTCAATCAA 21593 >seq11001 Length=13740 Score = 280 bits (310), Expect = 2e-70 Identities = 389/545 (71%), Gaps = 0/545 (0%) Strand=Plus/Minus Query 172147 TACATGGGAAGACAGTGGGAACTATCATACAGATTAGGTATGAGACCATGGATATGTGTA 172206 || ||||| | |||||||||| | | | | |||||| | || ||||| || Sbjct 5826 TATATGGGTTGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGATTGCGGTT 5767 Query 172207 GCATATTCAGCACCTGTATCAGCAGCATTTGCTGTGTTCCTTGTGTATCCATTCGGTCAG 172266 ||||||||||| ||||| |||| || |||||| ||| | | || ||| | ||||| Sbjct 5766 GCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATCTACCCAATTGGTCAA 5707 Query 172267 GGTTCATTCTCTGATGGTATGCCACTAGGTATCTCAGGTACGTTCAACTTTATGTTCGTG 172326 || || ||||| |||||||| ||||| ||||| ||||| |||||||| ||| | || Sbjct 5706 GGAAGCTTTTCTGACGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATGATTGTA 5647 Query 172327 TTCCAAGCAGAGCATAACATTCTAATGCATCCTTTCCACATGGCAGGAGTAGCAGGAATG 172386 |||||||| ||||| ||||| || ||||| || || |||||| ||| || || || | Sbjct 5646 TTCCAAGCTGAGCACAACATCCTTATGCACCCATTTCACATGCTAGGTGTGGCTGGTGTA 5587 Query 172387 TTTGGAGGATCTTTATTCTCAGCAATGCACGGTTCTTTAGTTACATCTTCTCTAATCAGA 172446 || || || || ||||| || ||||| |||||||| || || ||| | | || || Sbjct 5586 TTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCTTTGGTAACCTCTAGTTTGATTAGG 5527 Query 172447 GAGACAACTGAAGCAGAATCACAGAACTACGGATACAAGTTCGGACAAGAAGAAGAAACA 172506 || || || ||| ||||| || | | |||| ||||| |||| |||||||| Sbjct 5526 GAAACCACAGAAAATGAATCTGCTAATGAAAGTTACAGATTCGGTGAAGAGGAAGAAACT 5467 Query 172507 TACAACATAGTAGCAGCACACGGTTACTTTGGTCGTCTTATCTTCCAGTATGCTTCTTTC 172566 || || || ||||| || || ||||| ||||| || | |||||||| |||||| |||| Sbjct 5466 TATAATATCGTAGCCGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTC 5407 Query 172567 AACAACTCAAGAAGTCTTCACTTCTTCCTAGCAGTTTTCCCTGTTGTATGTGTATGGTTA 172626 ||||| || | | | ||||||||| |||| | || ||||| ||| || | ||||| Sbjct 5406 AACAATTCTCGTTCTTTACACTTCTTCTTAGCTGCTTGGCCTGTAGTAGGTATCTGGTTC 5347 Query 172627 ACCTCTATGGGTATCTGTACAATGGCATTCAACCTTAACGGTTTCAACTTCAACCAATCA 172686 ||| || | ||||| | || ||||| |||||| | || || || || ||||| ||||| Sbjct 5346 ACCGCTTTAGGTATAAGCACTATGGCTTTCAACTTAAATGGATTTAATTTCAATCAATCT 5287 Query 172687 GTTGT 172691 || || Sbjct 5286 GTAGT 5282 >seq251 Length=151924 Score = 197 bits (218), Expect = 2e-45 Identities = 407/609 (67%), Gaps = 21/609 (3%) Strand=Plus/Minus Query 173380 TTAATCTACCCACTAGGGCAGCACAGTTGGTTCTTCGCACCTTCATTCGGTGTCGCAGCA 173439 ||||| || || |||| ||| |||||||||| || || || ||||| ||||| Sbjct 52484 TTAATTTATCCGGTAGGTCAGTCAGGTTGGTTCTTTGCGCCCAATTTTGGTGTAGCAGCT 52425 Query 173440 ATCTTTCGTTATATCTTATTCATACAAGGTTTCCACAACATTACATTGAATCCATTTCAC 173499 || ||||| | ||| | || | ||||| || || || |||||||| |||||||| Sbjct 52424 ATATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATTGAACCCATTTCAT 52365 Query 173500 ATGATGGGTGTTGCAGGAATACTAGGTGGAGCATTACTATGTGCCATTCATGGTGCAACA 173559 |||||||| ||||| || | | || | | | |||| | ||||||||||| || Sbjct 52364 ATGATGGGAGTTGCGGGGGTGTTGGGCGCTTCTCTGTTATGCGTTATTCATGGTGCTACC 52305 Query 173560 GTGCAGAACACATTGTATGAAGACACATCACAATATACTGAAGGTAAGATTCAATCCACA 173619 || | || || || | |||||| | ||| ||| | | Sbjct 52304 GTAGAAAATACTTTATTTGAAGA------------TGGTGATGGTGCAAAT--------- 52266 Query 173620 ACTTTCAGAGCATTTGATCCTACACAGGAAGAAGAAACTTATAGTATGATTACAGCGAAC 173679 || ||| | || ||| | || || || | |||||||||||| ||| | || || ||| Sbjct 52265 ACATTCCGTGCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCCATGGTCACCGCTAAC 52206 Query 173680 AGATTCTGGTCACAGATATTTGGTATCGCATTTTCAAACAAAAGATTTTTACACTTCCTC 173739 | || ||||| || || ||||| | || ||||| || ||| | | ||||| ||| | Sbjct 52205 CGCTTTTGGTCCCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTT 52146 Query 173740 ATGTTGTTCGTACCTGTCATGGGTATGTGGACATCATCCATAGGTATCGTAGGTCTTGCA 173799 ||||| || ||||| || | ||| | |||| | | || | || ||||| || Sbjct 52145 ATGTTATTTGTACCAGTAACCGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTGGCC 52086 Query 173800 CTTAACCTTAGAGCATACGACTTTGTATCTCAAGAGATAAGAGCAGCAGAAGATCCAGAG 173859 || ||||| | || || ||||| || ||||| || || | ||||| |||||||| || Sbjct 52085 CTGAACCTACGTGCCTATGACTTCGTTTCTCAGGAAATCTGTGCAGCGGAAGATCCTGAA 52026 Query 173860 TTCGAGACTTTCTACACTAAGAATATACTTCTTAATGAAGGTATGAGAGCATGGATGTCA 173919 || |||||||||||||| || ||||| || | || |||||||| | || |||||| Sbjct 52025 TTTGAGACTTTCTACACCAAAAATATTCTCTTAAACGAAGGTATTCGTGCTTGGATGGGG 51966 Query 173920 TCTGTAGATCAACCACATGAGAACTTCGTATTTCCAGAAGAAGTGTTACCAAGAGGTAAC 173979 || |||||| || ||||| ||| | |||| || || || || |||| | || ||| Sbjct 51965 GCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAAC 51906 Query 173980 GCACTTTAA 173988 || |||||| Sbjct 51905 GCTCTTTAA 51897 >seq11993 Length=12302 Score = 174 bits (192), Expect = 2e-38 Identities = 243/337 (72%), Gaps = 8/337 (2%) Strand=Plus/Plus Query 172477 GGATACAAGTTCGGACAAGAAGAAGAAACATACAACATAGTAGCAGCACACGGTTACTTT 172536 || |||| ||||| ||||| |||||||| || || || ||||| | || ||||| ||| Sbjct 10375 GGTTACAGATTCGGTCAAGAGGAAGAAACTTATAATATTGTAGCCACTCATGGTTATTTT 10434 Query 172537 GGTCGTCTTATCTTCCAGTATGCTTCTTTCAACAACTCAAGAAGTCTT--CACTTCTTCC 172594 || | | |||||||| |||||| ||||||||| || | |||| ||||||||| Sbjct 10435 GGCTGATTGATCTTCCAATATGCTAGTTTCAACAATTCTC--ATTCTTTACACTTCTTCT 10492 Query 172595 TAGCAGTTTTCCCTGTTGTATGTGTATGGTTAACCTCTATGGGTATCTGTACAATGGCAT 172654 |||| | || ||||| ||| || | | ||| ||| || | |||||| | || ||| | | Sbjct 10493 TAGCTGCTTGGCCTGTAGTAGGTATCTAGTTCACCACTTTAGGTATCAGCACTATGACTT 10552 Query 172655 TCAACCTTAACGGTTTCAACTTCAACCAATCAGTTGTAGATGCTAACGGTAAG---ATTG 172711 ||||| | || || || || |||| ||||| || || ||| | | ||| ||| Sbjct 10553 TCAACTTAAATGGATTTAATGTCAATCAATCTGTAGTTGATAGTCAAGGTTGTGTAATTA 10612 Query 172712 -TTCCTACATGGGGTGACGTTCTTAACAGAGCAAACCTAGGTATGGAAGTTATGCATGAA 172770 || ||| ||| ||| || ||||| | || ||||| |||||||||||| |||||||| Sbjct 10613 ATTAATACTTGGTCTGATATTATTAACCGCGCTAACCTTGGTATGGAAGTTCTGCATGAA 10672 Query 172771 AGAAATGCACACAACTTCCCATTAGACCTTGCTTCTG 172807 | ||||| || || ||||| ||||||| ||| ||| Sbjct 10673 CGTAATGCTCATAATTTCCCTCTAGACCTAGCTGCTG 10709 >seq2785 Length=48819 Score = 174 bits (192), Expect = 2e-38 Identities = 244/337 (72%), Gaps = 8/337 (2%) Strand=Plus/Minus Query 172477 GGATACAAGTTCGGACAAGAAGAAGAAACATACAACATAGTAGCAGCACACGGTTACTTT 172536 || |||| ||| | ||||| |||||||| || || || ||||| || || ||||| ||| Sbjct 2795 GGTTACAGATTCAGTCAAGAGGAAGAAACTTATAATATTGTAGCCGCTCATGGTTATTTT 2736 Query 172537 GGTCGTCTTATCTTCCAGTATGCTTCTTTCAACAACTCAAGAAGTCTT--CACTTCTTCC 172594 || | | |||||||| |||||| ||||||||| || | |||| ||||||||| Sbjct 2735 GGCTGATTGATCTTCCAATATGCTAGTTTCAACAATTCTC--ATTCTTTACACTTCTTCT 2678 Query 172595 TAGCAGTTTTCCCTGTTGTATGTGTATGGTTAACCTCTATGGGTATCTGTACAATGGCAT 172654 |||| | || ||||| ||| || | | ||| ||| || | |||||| | || ||| | | Sbjct 2677 TAGCTGCTTGGCCTGTAGTAGGTATCTAGTTCACCGCTTTAGGTATCAGCACTATGACTT 2618 Query 172655 TCAACCTTAACGGTTTCAACTTCAACCAATCAGTTGTAGAT-GCTAACGGTAAG--ATTG 172711 ||||| | || || || || |||| ||||| || || ||| | ||| | | | ||| Sbjct 2617 TCAACTTAAATGGATTTAATGTCAATCAATCTGTAGTTGATAGTTAAGGTTGTGTAATTA 2558 Query 172712 -TTCCTACATGGGGTGACGTTCTTAACAGAGCAAACCTAGGTATGGAAGTTATGCATGAA 172770 || ||| ||| ||| || ||||| | || ||||| |||||||||||| |||||||| Sbjct 2557 ATTAATACTTGGTCTGATATTATTAACCGCGCTAACCTTGGTATGGAAGTTCTGCATGAA 2498 Query 172771 AGAAATGCACACAACTTCCCATTAGACCTTGCTTCTG 172807 | ||||| || || ||||| || |||| ||| ||| Sbjct 2497 CGTAATGCTCATAATTTCCCTCTAAACCTAGCTGCTG 2461 >seq3141 Length=44585 Score = 150 bits (166), Expect = 2e-31 Identities = 265/385 (69%), Gaps = 6/385 (2%) Strand=Plus/Minus Query 171829 TGGGTAACCTCAACTAACAACAGAATTTATGTTGGTTGGTTCGGTGTACTCATGATCCCA 171888 ||| ||||| ||| | ||| | |||| |||| ||||| ||||| | |||||||| Sbjct 42999 TGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCT 42940 Query 171889 TGTTTGCTCACAGCAGCAGCATGCTTCATCGTTGCATTCATTGCAGCACCTCCTGTCGAT 171948 ||| | || ||| || | || || |||| |||||||| |||||||| || ||| Sbjct 42939 ACTTTATTGACTGCAACATCTGTATTTATTATTGCTTTCATTGCTGCACCTCCGGTAGAT 42880 Query 171949 ATCGACGGAATCAGAGAACCAGTTGCGGGTTCTTTCTTATATGGTAACAACATCATCTCT 172008 || || || || | ||||| ||| | || ||||| | || || ||||| || || ||| Sbjct 42879 ATTGATGGTATTCGTGAACCTGTTTCTGGATCTTTACTTTACGGAAACAATATTATTTCT 42820 Query 172009 GGTGCAGTTGTTCCATCATCAAACGCAATAGGTCTCCACTTCTACCCTATCTGGGAAGCA 172068 |||| || | || | | || |||||| | ||||| ||||| || ||| ||||| Sbjct 42819 AGTGCCATTATCCCTACTTTTGCAGCTATAGGTTTGCACTTTTACCCAATATGGAAAGCA 42760 Query 172069 GCAACCGTAGATGAATGGTTGTACAATGGTGGTCCTTATCAGTTGGTAATCTTCCACTTC 172128 || |||| ||||||||||| ||||| |||||||||||| || | | | | |||||| Sbjct 42759 GCTTCCGTTGATGAATGGTTATACAACGGTGGTCCTTATGAGCTAATTGTTCTACACTTC 42700 Query 172129 CTTATCGGTATCTCAGCATAC---ATGGGAAGACAGTGGGAACTATCATACAGATTAGGT 172185 | | ||| | ||| ||| ||||| | |||||||||| | | | | ||| Sbjct 42699 TTACTTGGTGT---AGCTTACTATATGGGTCGTGAGTGGGAACTTATTTTCCGTCTGGGT 42643 Query 172186 ATGAGACCATGGATATGTGTAGCAT 172210 ||| | || ||||| ||| |||| Sbjct 42642 ATGCGCCCTTGGATTGCTGTTGCAT 42618 >seq3447 Length=41424 Score = 147 bits (162), Expect = 3e-30 Identities = 197/274 (72%), Gaps = 0/274 (0%) Strand=Plus/Plus Query 172185 TATGAGACCATGGATATGTGTAGCATATTCAGCACCTGTATCAGCAGCATTTGCTGTGTT 172244 |||| | || ||||| ||| ||||||||||| ||| | |||| | || | | || Sbjct 13299 TATGTGCCCTTGGATTGCTGTTGCATATTCAGCTCCTATTGCAGCTACTACTGTTATTTT 13358 Query 172245 CCTTGTGTATCCATTCGGTCAGGGTTCATTCTCTGATGGTATGCCACTAGGTATCTCAGG 172304 | | | || ||| | ||||| || || ||||| |||||||| ||||| ||||| || Sbjct 13359 CTTGATCTACCCAATTGGTCAAGGAAGCTTTTCTGACGGTATGCCTCTAGGAATCTCTGG 13418 Query 172305 TACGTTCAACTTTATGTTCGTGTTCCAAGCAGAGCATAACATTCTAATGCATCCTTTCCA 172364 ||| |||||||| ||| | || |||||||| ||||| ||||| || ||||| || || || Sbjct 13419 TACTTTCAACTTCATGATTGTATTCCAAGCTGAGCACAACATCCTTATGCACCCATTTCA 13478 Query 172365 CATGGCAGGAGTAGCAGGAATGTTTGGAGGATCTTTATTCTCAGCAATGCACGGTTCTTT 172424 |||| ||| || || || | || || || || ||||| || ||||| |||||||| Sbjct 13479 CATGCTAGGTGTGGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCTTT 13538 Query 172425 AGTTACATCTTCTCTAATCAGAGAGACAACTGAA 172458 || || ||| | | ||||| || || || ||| Sbjct 13539 GGTAACCTCTAGTTTGATCAGGGAAACCACAGAA 13572 >seq902 Length=93126 Score = 129 bits (142), Expect = 7e-25 Identities = 170/236 (72%), Gaps = 6/236 (3%) Strand=Plus/Minus Query 172147 TACATGGGAAGACAGTGGGAACTATCATACAGATTAGGTATGAGACCATGGATATGTGTA 172206 |||||||| | |||||||||| | | | | |||||| | || ||||| ||| Sbjct 1491 TACATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGATTGCTGTT 1432 Query 172207 GCATATTCAGCACCTGTATCAGCAGCATTTGCTGTGTTCCTTGTGTATCCATTCGGTCAG 172266 ||||||||||| ||||| |||| |||||| ||| | | || ||| | ||||| Sbjct 1431 GCATATTCAGCTCCTGTTGCAGC------TGCTGTTTTCTTGATCTACCCAATTGGTCAA 1378 Query 172267 GGTTCATTCTCTGATGGTATGCCACTAGGTATCTCAGGTACGTTCAACTTTATGTTCGTG 172326 || || ||||| | |||||| ||||| |||| ||||| |||||||| ||| | || Sbjct 1377 GGAAGCTTTTCTGACGATATGCCTCTAGGAATCTTTGGTACTTTCAACTTCATGATTGTA 1318 Query 172327 TTCCAAGCAGAGCATAACATTCTAATGCATCCTTTCCACATGGCAGGAGTAGCAGG 172382 |||||||| ||||| ||||| || ||||| || || |||||| ||| || || || Sbjct 1317 TTCCAAGCTGAGCACAACATCCTTATGCACCCATTTCACATGCTAGGTGTGGCTGG 1262 >seq31866 Length=2350 Score = 118 bits (130), Expect = 1e-21 Identities = 131/175 (75%), Gaps = 0/175 (0%) Strand=Plus/Plus Query 171936 ACCTCCTGTCGATATCGACGGAATCAGAGAACCAGTTGCGGGTTCTTTCTTATATGGTAA 171995 |||||| || ||||| || || || | ||||| ||| | || ||||| | || || || Sbjct 1809 ACCTCCGGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTTTACTTTACGGAAA 1868 Query 171996 CAACATCATCTCTGGTGCAGTTGTTCCATCATCAAACGCAATAGGTCTCCACTTCTACCC 172055 ||| || || |||||||| || | || | || || |||||| | ||||| ||||| Sbjct 1869 CAATATTATTTCTGGTGCCATTATCCCTACTTCTGCAGCTATAGGTTTGCACTTTTACCC 1928 Query 172056 TATCTGGGAAGCAGCAACCGTAGATGAATGGTTGTACAATGGTGGTCCTTATCAG 172110 || |||||||| || |||| ||||||||||| ||||| |||||||||||| || Sbjct 1929 AATATGGGAAGCGGCTTCCGTTGATGAATGGTTATACAACGGTGGTCCTTATGAG 1983 >seq105467 Length=471 Score = 116 bits (128), Expect = 4e-21 Identities = 164/227 (72%), Gaps = 4/227 (2%) Strand=Plus/Plus Query 172585 CACTTCTTCCTAGCAGTTTTCCCTGTTGTATGTGTATGGTTAACCTCTATGGGTATCTGT 172644 ||||||||| |||| | || ||||| ||| || | | ||| ||| || | |||||| | Sbjct 10 CACTTCTTCTTAGCTGCTTGGCCTGTAGTAGGTATCTAGTTCACCGCTTTAGGTATCAGC 69 Query 172645 ACAATGGCATTCAACCTTAACGGTTTCAACTTCAACCAATCAGTTGTAGAT-GCTAACGG 172703 || ||| | |||||| | || || || || |||| ||||| || || ||| | ||| | Sbjct 70 ACTATGACTTTCAACTTAAATGGATTTAATGTCAATCAATCTGTAGTTGATAGTTAAGGT 129 Query 172704 TAAG--ATTG-TTCCTACATGGGGTGACGTTCTTAACAGAGCAAACCTAGGTATGGAAGT 172760 | | ||| || ||| ||| ||| || ||||| | || ||||| ||||||||||| Sbjct 130 TGTGTAATTAATTAATACTTGGTCTGATATTATTAACCGCGCTAACCTTGGTATGGAAGT 189 Query 172761 TATGCATGAAAGAAATGCACACAACTTCCCATTAGACCTTGCTTCTG 172807 | |||||||| | ||||| || || ||||| || |||| ||| ||| Sbjct 190 TCTGCATGAACGTAATGCTCATAATTTCCCTCTAAACCTAGCTGCTG 236 >seq136643 Length=350 Score = 100 bits (110), Expect = 3e-16 Identities = 147/206 (71%), Gaps = 4/206 (2%) Strand=Plus/Minus Query 172606 CCTGTTGTATGTGTATGGTTAACCTCTATGGGTATCTGTACAATGGCATTCAACCTTAAC 172665 ||||| ||| || | | ||| ||| || | |||||| | || ||||| |||||| | || Sbjct 341 CCTGTAGTAGGTATCTAGTTCACCACTTTAGGTATCAGCACTATGGCTTTCAACTTAAAT 282 Query 172666 GGTTTCAACTTCAACCAATCAGTTGTAGATGCTAACGGTAAG---ATTG-TTCCTACATG 172721 || || || |||| ||||| || || ||| | | ||| ||| || ||| || Sbjct 281 GGATTTAATTTCAGTCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATTAATACTTG 222 Query 172722 GGGTGACGTTCTTAACAGAGCAAACCTAGGTATGGAAGTTATGCATGAAAGAAATGCACA 172781 || ||| || ||||| | || |||| |||||||||||| |||| ||| | ||||| || Sbjct 221 GGCTGATATTATTAACTGCGCTGACCTTGGTATGGAAGTTCTGCAAGAACGTAATGCTCA 162 Query 172782 CAACTTCCCATTAGACCTTGCTTCTG 172807 || ||||| ||||||| ||| ||| Sbjct 161 TAATTTCCCTCTAGACCTAGCTACTG 136 >seq4134 Length=35870 Score = 95.1 bits (104), Expect = 1e-14 Identities = 73/87 (84%), Gaps = 0/87 (0%) Strand=Plus/Plus Query 159693 TGGTGCAGATGTATGTCATCTAAACTTACATAAGACATTCTGTATTCCACATGGAGGTGG 159752 ||| || ||||| || ||||| ||| | ||||||||||| || |||||||| ||||| || Sbjct 19880 TGGAGCTGATGTCTGCCATCTGAACCTCCATAAGACATTTTGCATTCCACACGGAGGCGG 19939 Query 159753 AGGTCCTGGCGTAGGTCCTATTGGTGT 159779 ||||||||| | |||||||||||||| Sbjct 19940 TGGTCCTGGCATGGGTCCTATTGGTGT 19966 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 585788143761920