Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rosa_20x_20damascena_20[genbank_20GCA_5F001662545.1_202016-06-13]
307,872 sequences; 711,719,955 total letters
Query= NC_015398.1
Length=101487
Score E
Sequences producing significant alignments: (Bits) Value
seq459 113 3e-20
seq3539 104 2e-17
seq181 102 5e-17
seq171 102 5e-17
seq33582 100 2e-16
seq13557 98.7 6e-16
seq28390 95.1 8e-15
seq135 95.1 8e-15
seq21550 91.5 1e-13
seq16961 91.5 1e-13
seq400 86.0 4e-12
seq56994 84.2 1e-11
seq4683 84.2 1e-11
seq56629 82.4 5e-11
seq9104 82.4 5e-11
>seq459
Length=124062
Score = 113 bits (124), Expect = 3e-20
Identities = 154/213 (72%), Gaps = 8/213 (4%)
Strand=Plus/Minus
Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832
|||||||| | ||| || ||||||||||||||||| | ||| | || | || ||
Sbjct 120338 ACCAAGTGGAGAGTGGACTCCTTCTGAATGTTATAGTCAGCAAGTGTCCGGCCGTCCTCA 120279
Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892
||||| || || ||||| || || | ||||||||| | || | |||||||||||
Sbjct 120278 AGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATTCCCTCCTTGTCTTGG 120219
Query 34893 ATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGT 34948
|||||| |||||| || | ||||| ||| | ||||| |||| ||| || ||
Sbjct 120218 ATCTTCGCTTTGAC--AT--TGTCGATGGTGTCAGAGCTTTCAACCTCGAGGGTAATAGT 120163
Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
|| || ||||| || |||||||||||||||||
Sbjct 120162 CTTGCCTGTGAGGGTTTTCACAAAGATCTGCAT 120130
Score = 107 bits (118), Expect = 1e-18
Identities = 165/233 (71%), Gaps = 8/233 (3%)
Strand=Plus/Minus
Query 34753 TTCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCG 34812
|||| || | || || | ||||||||||| ||| || || || || || || || |
Sbjct 120586 TTCCACCACGCAGCCGGAGAACCAAGTGAAGGGTGGACTCCTTTTGGATATTGTAATCTG 120527
Query 34813 AAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCG 34872
|||| | || |||| || |||||||| || ||||| || || | ||||| ||| | |
Sbjct 120526 CAAGGGTGCGACCATCCTCTAGCTGTTTGCCAGCAAAGATGAGCCTCTGCTGATCTGGGG 120467
Query 34873 GCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCC 34928
| | ||||||||||| ||||| ||||| || ||||||| ||| | |
Sbjct 120466 GGATACCCTCCTTGTCCTGGATCTTTGCCTTGAC--AT--TATCGATTGTATCAGAGCTC 120411
Query 34929 TCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
|| || || | ||| ||||| || || ||||||||||| ||||||||||||||
Sbjct 120410 TCGACCTCCAAGGTGATGGTCTTCCCTGTGAGAGTCTTGACAAAGATCTGCAT 120358
Score = 93.3 bits (102), Expect = 3e-14
Identities = 140/195 (72%), Gaps = 8/195 (4%)
Strand=Plus/Minus
Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850
|| ||||| ||||| || |||| || | | |||| || ||||| || || ||||||
Sbjct 121004 TCCTTCTGGATGTTGTAATCCGCTAGAGTCCTCCCATCTTCAAGCTGCTTACCAGCAAAT 120945
Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910
|| || | |||||||| | || | ||||||||||| |||||| ||| || ||
Sbjct 120944 ATGAGCCTCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGAATCTTTGCTTTCAC--AT 120887
Query 34911 GCTATCGATTC-ACCGGC---CTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTT 34966
|||| ||| | | | ||| || || | ||||||||| ||||| ||||| |||||
Sbjct 120886 --TATCAATTGTATCAGAACTCTCTACCTCCAAGGTTATGGTCTTTCCAGTGAGGGTCTT 120829
Query 34967 CACAAAGATCTGCAT 34981
|||||| ||||||||
Sbjct 120828 CACAAAAATCTGCAT 120814
>seq3539
Length=40568
Score = 104 bits (114), Expect = 2e-17
Identities = 170/244 (70%), Gaps = 12/244 (5%)
Strand=Plus/Minus
Query 34748 ATCAT--TTCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTA 34805
||||| |||||||||||| |||||| |||| ||||| ||| || || |||||||||
Sbjct 16894 ATCATAGTTCCTCCCCTCAGCCTCAACACCAGGTGAAGAGTGGACTCCTTTTGAATGTTA 16835
Query 34806 TAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGG 34865
|| |||| ||| ||| |||| |||| || || || ||||| || |||| || ||
Sbjct 16834 TAATCCGCAAGAGTTCTGCCATCTTCCAATTGCTTGCCAGCAAAGATCAGTCTCTGTTGA 16775
Query 34866 TCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGAC-----GGATGCTATCGATT 34920
|| | || | || || || || ||||| |||||| |||| ||||| |
Sbjct 16774 TCAGGAGGGATGCCTTCTTTATCCTGGATCTTGGCTTTGACATTGTCGATGGTATCGTTA 16715
Query 34921 CACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCA 34980
| ||||||| |||| || ||||| || || || ||||| ||||| || || ||||
Sbjct 16714 C-----CCTCAACCTCGAGAGTGATGGTCTTCCCAGTTAGAGTTTTCACGAAAATTTGCA 16660
Query 34981 TATT 34984
| ||
Sbjct 16659 TGTT 16656
>seq181
Length=165841
Score = 102 bits (112), Expect = 5e-17
Identities = 140/194 (72%), Gaps = 4/194 (2%)
Strand=Plus/Plus
Query 34790 TTCTTTCTGAATGTTATAGTCCG--AAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCA 34847
||| |||||||| ||||| || | |||| |||| |||| || ||||| ||||| ||
Sbjct 133714 TTCCTTCTGAATATTATAATCAGCCAAAG--TTCGGCCATCCTCGAGCTGCTTTCCTGCG 133771
Query 34848 AATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACG 34907
|| || || | ||||||||| |||| | |||||||| || ||||| ||||||
Sbjct 133772 AAGATGAGCCTCTGCTGGTCTGGCGGGATTCCCTCCTTATCTTGGATCTTGGCCTTGACG 133831
Query 34908 GATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTC 34967
| |||| ||| | ||| || |||| ||| ||||| || || || || || |||
Sbjct 133832 TTGTCGATCGTATCAGAGCTCTCGACCTCGAGGGTGATGGTCTTGCCGGTTAGGGTTTTC 133891
Query 34968 ACAAAGATCTGCAT 34981
||||||||||||||
Sbjct 133892 ACAAAGATCTGCAT 133905
Score = 100 bits (110), Expect = 2e-16
Identities = 141/198 (71%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 34785 GTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCG 34844
|| || || |||||||||||||| |||| || | || |||| |||| || || ||
Sbjct 136558 GTACTCTCCTTCTGAATGTTATAATCCGCTAGAGTCCGGCCATCCTCCAATTGCTTCCCA 136617
Query 34845 GCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTG 34904
|| ||||| || | |||||||| | || | |||||||||||| ||| ||| |||
Sbjct 136618 GCGAATATGAGCCTCTGCTGGTCCGGTGGAATCCCCTCCTTGTCTTGAATTTTCGCCTTG 136677
Query 34905 ACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTC 34964
||| | |||| || | ||| || || | || || || ||||| || ||||||
Sbjct 136678 ACGTTGTCAATCGTATCGGAGCTCTCCACCTCCAGAGTGATCGTCTTTCCTGTCAGAGTC 136737
Query 34965 TTCACAAAGATCTGCATA 34982
||||||||||| ||||||
Sbjct 136738 TTCACAAAGATTTGCATA 136755
Score = 93.3 bits (102), Expect = 3e-14
Identities = 146/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832
|||| ||| | ||| || ||||| ||||| ||||| | ||| | || | || ||
Sbjct 159360 ACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTACGGCCGTCCTCG 159419
Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892
||||| |||||||| || || || | ||||||||| | || | |||||||||||
Sbjct 159420 AGCTGCTTTCCGGCGAAGATGAGCCTTTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGG 159479
Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952
||||| |||||| | || | || | ||| || |||| ||| ||||| ||
Sbjct 159480 ATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGCTCTCGACCTCGAGGGTGATGGTCTTG 159539
Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
|| ||||| || ||||| |||||||||||
Sbjct 159540 CCGGTGAGGGTTTTCACGAAGATCTGCAT 159568
Score = 82.4 bits (90), Expect = 5e-11
Identities = 149/214 (70%), Gaps = 8/214 (4%)
Strand=Plus/Plus
Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832
|||||||| | ||| || ||||| || ||||| || | ||| | || |||| ||
Sbjct 158448 ACCAAGTGGAGGGTGGACTCCTTCTGGATATTATAATCAGCCAGGGTACGACCATCCTCG 158507
Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892
||||| || |||||||| || || | |||||||| | || | ||| ||||||||
Sbjct 158508 AGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCCGGTGGGATCCCTTCCTTGTCCTGG 158567
Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTC-ACCGGC---CTCAACATCGACGGTTATGGT 34948
||||| |||||| || |||| || | ||| ||| || || | || || ||
Sbjct 158568 ATCTTGGCTTTGAC--AT--TATCAATGGTATCGGAGCTCTCCACCTCCAGAGTAATTGT 158623
Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982
|| || || ||||||||||| || |||||||||
Sbjct 158624 CTTGCCAGTCAGAGTCTTCACGAAAATCTGCATA 158657
Score = 82.4 bits (90), Expect = 5e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814
|| |||||||||| | |||||||| | ||| || ||||| ||||| || || |
Sbjct 158886 CCACCCCTCAACCGGAGCACCAAGTGCAGAGTGGACTCCTTCTGGATGTTGTAATCGGCC 158945
Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874
||| | | | || |||| || |||||||| || || | | |||||||| | ||
Sbjct 158946 AGGGTCCTGCCGTCCTCCAATTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGGGGA 159005
Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934
| ||||||||||| ||||| |||||| | || | || | ||||||
Sbjct 159006 ATTCCCTCCTTGTCCTGGATCTTAGCCTTGACGTTGTCGATGGTGTCGGAGCTCTCAACC 159065
Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982
|||| || ||||| || || ||||| || || || ||||||||||||
Sbjct 159066 TCGAGAGTGATGGTCTTGCCGGTGAGGGTTTTGACGAAGATCTGCATA 159113
>seq171
Length=169594
Score = 102 bits (112), Expect = 5e-17
Identities = 148/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832
|||| ||||| ||| ||| || ||||| || ||||| | ||| | ||| |||| ||
Sbjct 165792 ACCAGGTGAAGAGTGGATTCCTTTTGAATATTGTAGTCAGCGAGGGTGCGTCCATCCTCG 165733
Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892
||||| || || ||||| || || | ||||||||| | || | || ||||||||
Sbjct 165732 AGCTGCTTGCCAGCAAAAATCAGCCTTTGCTGGTCCGGGGGGATGCCTTCCTTGTCTTGG 165673
Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952
|| || |||||| |||| | ||| | ||||| || | ||||||||| ||
Sbjct 165672 ATTTTGGCTTTGACATTATCTATGGTGTCAGAGCTTTCAACCTCAAGGGTTATGGTCTTG 165613
Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
|| |||||||| || || |||||||||||
Sbjct 165612 CCAGTGAGAGTTTTGACGAAGATCTGCAT 165584
Score = 95.1 bits (104), Expect = 8e-15
Identities = 144/205 (70%), Gaps = 0/205 (0%)
Strand=Plus/Minus
Query 34778 GTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTG 34837
||||| ||| || ||||| ||||||||||| | |||| | | |||| || |||||
Sbjct 166699 GTGAAGGGTGGACTCCTTCTGGATGTTATAGTCAGCAAGGGTCCTCCCATCCTCAAGCTG 166640
Query 34838 TTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTT 34897
||||| |||||||| || | |||||||| | || | ||||||||||| ||||||
Sbjct 166639 CTTTCCAGCAAATATGAGCCTCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGAATCTT 166580
Query 34898 CTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGT 34957
||| || | |||| || ||| || || | || ||||| || || ||
Sbjct 166579 GGTTTTTACATTGTCAATCGTATCTGAACTCTCCACCTCCAAAGTAATGGTCTTCCCAGT 166520
Query 34958 GAGAGTCTTCACAAAGATCTGCATA 34982
||||| || |||||||||||||||
Sbjct 166519 CAGAGTTTTAACAAAGATCTGCATA 166495
>seq33582
Length=2169
Score = 100 bits (110), Expect = 2e-16
Identities = 147/206 (71%), Gaps = 4/206 (2%)
Strand=Plus/Minus
Query 34778 GTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCG--AAAGGCTTCGTTCATCATCCAGC 34835
||| | |||| ||| |||||||| ||||| || | |||| |||| |||| || |||
Sbjct 1627 GTGGAGTGTGGATTCCTTCTGAATATTATAATCAGCCAAAG--TTCGGCCATCCTCGAGC 1570
Query 34836 TGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATC 34895
|| ||||| || || || || | ||||||||| |||| | |||||||| || |||
Sbjct 1569 TGCTTTCCTGCGAAGATGAGCCTCTGCTGGTCTGGCGGGATTCCCTCCTTATCTTGGATC 1510
Query 34896 TTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCC 34955
|| |||||| | |||| ||| | ||| || |||| ||| ||||| || ||
Sbjct 1509 TTGGCCTTGACGTTGTCGATCGTGTCAGAGCTCTCGACCTCGAGGGTGATGGTCTTGCCG 1450
Query 34956 GTGAGAGTCTTCACAAAGATCTGCAT 34981
|| | || |||||||||||||||||
Sbjct 1449 GTTAAGGTTTTCACAAAGATCTGCAT 1424
>seq13557
Length=10351
Score = 98.7 bits (108), Expect = 6e-16
Identities = 145/198 (73%), Gaps = 12/198 (6%)
Strand=Plus/Minus
Query 34791 TCTTTCTGAATGTTATAGTCCG--AAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAA 34848
|| || |||||||| || || | |||| | || |||| ||||| || ||||| ||||
Sbjct 8489 TCCTTTTGAATGTTGTAATCAGCCAAAG--TGCGGCCATCCTCCAGTTGCTTTCCTGCAA 8432
Query 34849 ATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGG 34908
| || | | ||||||||| | || | ||||||||||| |||||| ||||||
Sbjct 8431 AGATCAACCTCTGCTGGTCTGGTGGGATACCCTCCTTGTCTTGAATCTTTGCTTTGAC-- 8374
Query 34909 ATGCTATCGAT--TCACCG-GC-CTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTC 34964
|| | || || | ||| || |||||| || | || || ||||| ||||| ||||||
Sbjct 8373 AT--TGTCAATAGTATCCGAGCTCTCAACCTCCAGAGTGATCGTTTTCCCCGTCAGAGTC 8316
Query 34965 TTCACAAAGATCTGCATA 34982
||||||||||||||||||
Sbjct 8315 TTCACAAAGATCTGCATA 8298
>seq28390
Length=2812
Score = 95.1 bits (104), Expect = 8e-15
Identities = 152/216 (70%), Gaps = 8/216 (4%)
Strand=Plus/Plus
Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832
|||| ||| | ||| || ||||| ||||| ||||| | ||| |||| | || ||
Sbjct 506 ACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGCTAGGGTTCGGCCGTCCTCG 565
Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892
||||| |||||||| || || || | ||||||||| |||| | ||||||||||| |
Sbjct 566 AGCTGCTTTCCGGCGAAGATGAGCCTCTGCTGGTCTGGCGGGATGCCCTCCTTGTCTTGA 625
Query 34893 ATCTTCTGTTTGACGGATGCTATCGAT--TCACCG--GCCTCAACATCGACGGTTATGGT 34948
||||| || || | | ||||| | ||| | ||| || || | ||| || ||
Sbjct 626 ATCTTGGCCTTCAC----GTTGTCGATGGTGTCCGACGACTCCACCTCCAGGGTGATCGT 681
Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCATATT 34984
|| ||||| || || ||||| ||||||||||| ||
Sbjct 682 CTTCCCCGTTAGGGTTTTCACGAAGATCTGCATCTT 717
>seq135
Length=179161
Score = 95.1 bits (104), Expect = 8e-15
Identities = 140/196 (71%), Gaps = 8/196 (4%)
Strand=Plus/Plus
Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850
|| |||||||| ||||| |||| ||| | | |||| |||| || |||||||| ||
Sbjct 30507 TCCTTCTGAATATTATAATCCGCAAGAGTCCTGCCATCCTCCAATTGCTTTCCGGCGAAG 30566
Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910
|| | || ||||| ||| |||| | ||||||||||| ||| ||| ||||| ||
Sbjct 30567 ATCAACCGCTGCTGATCTGGCGGAATGCCCTCCTTGTCTTGAATTTTCGCCTTGAC--AT 30624
Query 34911 GCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTT 34966
||||||| ||| | ||| || |||| || || || |||||||| || || ||
Sbjct 30625 --TATCGATCGTATCAGAGCTCTCCACCTCGAGAGTGATCGTCTTTCCCGTTAGGGTTTT 30682
Query 34967 CACAAAGATCTGCATA 34982
|| ||||||||||||
Sbjct 30683 GACGAAGATCTGCATA 30698
Score = 93.3 bits (102), Expect = 3e-14
Identities = 138/194 (71%), Gaps = 4/194 (2%)
Strand=Plus/Plus
Query 34791 TCTTTCTGAATGTTATAGTCCG--AAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAA 34848
|| || |||||||| || || | |||| | || |||| |||| || ||||| ||||
Sbjct 30279 TCCTTTTGAATGTTGTAATCAGCCAAAG--TGCGGCCATCCTCCAATTGCTTTCCTGCAA 30336
Query 34849 ATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGG 34908
| || | | ||||| || | || | |||||||||||| ||||||| ||||||
Sbjct 30337 AGATCAACCTCTGCTGATCAGGTGGGATCCCCTCCTTGTCTTGAATCTTCGCTTTGACAT 30396
Query 34909 ATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCA 34968
| || | || | |||||| || | || || ||||| ||||| ||||||||||
Sbjct 30397 TGTCAATAGTATCGGAGCTCTCAACCTCCAGAGTGATCGTTTTCCCCGTCAGAGTCTTCA 30456
Query 34969 CAAAGATCTGCATA 34982
||||||||||||||
Sbjct 30457 CAAAGATCTGCATA 30470
Score = 84.2 bits (92), Expect = 1e-11
Identities = 133/191 (70%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850
|| ||||| ||||| ||||| | ||| | || | || || ||||| |||||||| ||
Sbjct 30963 TCCTTCTGGATGTTGTAGTCGGCGAGGGTCCGGCCGTCCTCGAGCTGCTTTCCGGCGAAG 31022
Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910
|| || || |||||||| |||| | ||||||||||| || || ||||||
Sbjct 31023 ATGAGACGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCTTGGATTTTGGCCTTGACGTTG 31082
Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970
| || | || | ||| || |||| ||| ||||| || || || || || || ||
Sbjct 31083 TCGATGGTGTCGGAGCTCTCGACCTCGAGGGTGATGGTCTTGCCGGTCAGGGTTTTGACG 31142
Query 34971 AAGATCTGCAT 34981
|||||||||||
Sbjct 31143 AAGATCTGCAT 31153
Score = 82.4 bits (90), Expect = 5e-11
Identities = 134/193 (69%), Gaps = 0/193 (0%)
Strand=Plus/Plus
Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849
||| ||||| || ||||| || | ||| | || | || |||| ||| |||||||| ||
Sbjct 30734 TTCCTTCTGGATATTATAATCGGCGAGGGTCCGGCCGTCCTCCAACTGCTTTCCGGCGAA 30793
Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909
|| || | ||||| || | || | |||||||||||| ||| ||| ||||||
Sbjct 30794 GATCAGCCTCTGCTGATCCGGAGGAATCCCCTCCTTGTCTTGAATTTTCGCCTTGACGTT 30853
Query 34910 TGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969
| || | ||| | ||| || || | || || || || || ||||| || |||||
Sbjct 30854 GTCGATTGTGTCAGAGCTCTCGACCTCCAGAGTGATCGTCTTCCCGGTGAGGGTTTTCAC 30913
Query 34970 AAAGATCTGCATA 34982
||||||||||||
Sbjct 30914 GAAGATCTGCATA 30926
>seq21550
Length=4752
Score = 91.5 bits (100), Expect = 1e-13
Identities = 151/216 (70%), Gaps = 8/216 (4%)
Strand=Plus/Plus
Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832
|||| ||| | ||| || ||||| ||||| ||||| | ||| |||| | || ||
Sbjct 2421 ACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGCTAGGGTTCGGCCGTCCTCT 2480
Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892
||||| |||||||| || || || | |||||||| |||| | ||||||||||| |
Sbjct 2481 AGCTGCTTTCCGGCGAAGATGAGCCTCTGCTGGTCCGGCGGGATGCCCTCCTTGTCTTGA 2540
Query 34893 ATCTTCTGTTTGACGGATGCTATCGAT--TCACCG--GCCTCAACATCGACGGTTATGGT 34948
||||| || || | | ||||| | ||| | ||| || || | ||| || ||
Sbjct 2541 ATCTTGGCCTTAAC----GTTGTCGATGGTGTCCGACGACTCCACCTCCAGGGTGATCGT 2596
Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCATATT 34984
|| ||||| || || ||||| ||||||||||| ||
Sbjct 2597 CTTCCCCGTTAGGGTTTTCACGAAGATCTGCATCTT 2632
>seq16961
Length=7293
Score = 91.5 bits (100), Expect = 1e-13
Identities = 151/216 (70%), Gaps = 8/216 (4%)
Strand=Plus/Minus
Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832
|||| ||| | ||| || ||||| ||||| ||||| | ||| |||| | || ||
Sbjct 3189 ACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGCTAGGGTTCGGCCGTCCTCA 3130
Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892
||||| |||||||| || || || | |||||||| |||| | ||||||||||| |
Sbjct 3129 AGCTGCTTTCCGGCGAAGATGAGCCTCTGCTGGTCCGGCGGGATGCCCTCCTTGTCTTGA 3070
Query 34893 ATCTTCTGTTTGACGGATGCTATCGAT--TCACCG--GCCTCAACATCGACGGTTATGGT 34948
||||| || || | | ||||| | ||| | ||| || || | ||| || ||
Sbjct 3069 ATCTTGGCCTTCAC----GTTGTCGATGGTGTCCGACGACTCCACCTCCAGGGTGATCGT 3014
Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCATATT 34984
|| ||||| || || ||||| ||||||||||| ||
Sbjct 3013 CTTCCCCGTTAGGGTTTTCACGAAGATCTGCATCTT 2978
>seq400
Length=129899
Score = 86.0 bits (94), Expect = 4e-12
Identities = 134/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849
||| ||||| ||||| ||||| | ||| | || | || || ||||| |||||||| ||
Sbjct 14516 TTCCTTCTGGATGTTGTAGTCGGCGAGGGTACGGCCGTCCTCGAGCTGCTTTCCGGCGAA 14575
Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909
||| || | ||||| || | || | ||||||||||| ||||| ||||||
Sbjct 14576 TATGAGCCTCTGCTGATCAGGAGGGATGCCCTCCTTGTCTTGGATCTTGGCCTTGACGTT 14635
Query 34910 TGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969
| || | || | ||| || |||| ||| ||||| || ||||| || || |||||
Sbjct 14636 GTCGATGGTGTCGGAGCTCTCGACCTCGAGGGTGATGGTCTTGCCCGTTAGGGTTTTCAC 14695
Query 34970 AAAGATCTGCAT 34981
|| ||||||||
Sbjct 14696 GAATATCTGCAT 14707
>seq56994
Length=1141
Score = 84.2 bits (92), Expect = 1e-11
Identities = 133/191 (70%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850
|| ||||| ||||| ||||| | ||| | || | || || ||||| || ||||| ||
Sbjct 5 TCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCGAGCTGCTTACCGGCGAAG 64
Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910
|| || | |||||||| | || | ||||||||||| ||||| ||||||
Sbjct 65 ATGAGCCTCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTG 124
Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970
| || | ||| | ||| || |||| ||| ||||| || || || || || |||||
Sbjct 125 TCGATGGTGTCAGAGCTCTCGACCTCGAGGGTGATGGTCTTGCCGGTCAGGGTTTTCACG 184
Query 34971 AAGATCTGCAT 34981
|||||||||||
Sbjct 185 AAGATCTGCAT 195
>seq4683
Length=32477
Score = 84.2 bits (92), Expect = 1e-11
Identities = 133/191 (70%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850
|| ||||| || || ||||| | ||| | || | || || || ||||| ||||| ||
Sbjct 3742 TCCTTCTGGATATTGTAGTCGGCGAGGGTCCGGCCGTCCTCAAGTTGTTTGCCGGCGAAG 3683
Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910
|| || | || || ||| | || | ||||||||||| |||||| |||||||
Sbjct 3682 ATGAGCCTCTGTTGATCTGGAGGGATGCCCTCCTTGTCCTGGATCTTCGCTTTGACGTTG 3623
Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970
| || | ||| | ||| || || | ||| ||||| || || || || || ||||||
Sbjct 3622 TCGATGGTGTCAGAGCTCTCCACCTCAAGGGTGATGGTCTTGCCGGTTAGGGTTTTCACA 3563
Query 34971 AAGATCTGCAT 34981
|||||||||||
Sbjct 3562 AAGATCTGCAT 3552
>seq56629
Length=1151
Score = 82.4 bits (90), Expect = 5e-11
Identities = 140/199 (70%), Gaps = 8/199 (4%)
Strand=Plus/Minus
Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850
|| ||||| ||||| ||||| | ||| |||| |||| || ||||| |||||||| ||
Sbjct 629 TCCTTCTGGATGTTGTAGTCGGCTAGGGTTCGGCCATCCTCGAGCTGCTTTCCGGCGAAG 570
Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910
|| || | ||||||||| | | | ||||| ||||| |||||| || || ||
Sbjct 569 ATGAGCCTTTGCTGGTCCGGTGAGATGCCCTCATTGTCTTGAATCTTGGCCTTCAC--AT 512
Query 34911 GCTATCGAT--TCACCGGCC--TCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTT 34966
| ||||| | ||| | || || || | ||| || || || ||||| || || ||
Sbjct 511 --TGTCGATGGTGTCCGACGATTCCACCTCCAGGGTGATCGTCTTCCCCGTTAGGGTTTT 454
Query 34967 CACAAAGATCTGCATATTC 34985
||| ||||||||||| |||
Sbjct 453 CACGAAGATCTGCATCTTC 435
>seq9104
Length=17150
Score = 82.4 bits (90), Expect = 5e-11
Identities = 149/216 (69%), Gaps = 8/216 (4%)
Strand=Plus/Minus
Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832
|||| ||| | ||| || ||||| ||||| ||||| | ||| |||| | || ||
Sbjct 3513 ACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGCTAGGGTTCGGCCGTCCTCG 3454
Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892
||||| |||||||| || || || | |||||||| | || | ||||||||||| |
Sbjct 3453 AGCTGCTTTCCGGCGAAGATGAGCCTCTGCTGGTCCGGTGGGATGCCCTCCTTGTCTTGA 3394
Query 34893 ATCTTCTGTTTGACGGATGCTATCGAT--TCACCG--GCCTCAACATCGACGGTTATGGT 34948
||||| || || | | ||||| | ||| | ||| || || | ||| || ||
Sbjct 3393 ATCTTGGCCTTCAC----GTTGTCGATGGTGTCCGACGACTCCACCTCCAGGGTGATCGT 3338
Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCATATT 34984
|| || || || || ||||| ||||||||||| ||
Sbjct 3337 CTTCCCTGTTAGGGTTTTCACGAAGATCTGCATCTT 3302
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 323415513052416
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |