Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rosa_20x_20damascena_20[genbank_20GCA_5F001662545.1_202016-06-13] 307,872 sequences; 711,719,955 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq112987 82.4 9e-11 >seq112987 Length=426 Score = 82.4 bits (90), Expect = 9e-11 Identities = 75/95 (79%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 18961 CATGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAA 19020 || ||||||||||| || || ||||| |||||| || | ||||| || ||||| ||| Sbjct 305 CAAGCAAAATCACAGTGGAGGCCCTCATCTCTAGAAATAAGCTCATTTGAGAATGTCAAA 364 Query 19021 CCAGGCATCAGTCCTCttttttttAACCAGAATAT 19055 || ||||| ||||| || ||||| | ||||||||| Sbjct 365 CCTGGCATTAGTCCCCTCTTTTTAAGCCAGAATAT 399 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 559945580494080