Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rosa_20x_20damascena_20[genbank_20GCA_5F001662545.1_202016-06-13] 307,872 sequences; 711,719,955 total letters Query= NC_016658.1 Length=47741 Score E Sequences producing significant alignments: (Bits) Value seq11001 320 5e-83 seq5638 320 5e-83 seq11993 201 3e-47 seq2785 196 1e-45 seq902 168 2e-37 seq3447 161 3e-35 seq3141 156 1e-33 seq63634 150 5e-32 seq105467 116 1e-21 seq136643 105 2e-18 seq7201 100 9e-17 seq140248 98.7 3e-16 >seq11001 Length=13740 Score = 320 bits (354), Expect = 5e-83 Identities = 401/547 (73%), Gaps = 5/547 (1%) Strand=Plus/Plus Query 5290 TCTACCGCTAGAGTCAACGACTGACTGATTGAAGTTAAAGCCGTTAAGATTAAAAGCCAT 5349 |||||| ||| | ||| || || |||||||| ||||| || || | || |||||||| Sbjct 5269 TCTACCACTAAA---AACTACAGATTGATTGAAATTAAATCCATTTAAGTTGAAAGCCAT 5325 Query 5350 AGTGGAGATTCCCATAGAGGTAAGCCATATGCAAACGACGGGCCAAGTAGCCAGGAAGAA 5409 |||| || || | || ||| | ||| || | || || ||||||| ||| | |||||| Sbjct 5326 AGTGCTTATACCTAAAGCGGTGAACCAGATACCTACTACAGGCCAAGCAGCTAAGAAGAA 5385 Query 5410 ATGTAAACTACGGCTATTGTTAAAGCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCC 5469 |||||| ||| |||||| || |||||||| |||||||| | || ||||| || || Sbjct 5386 GTGTAAAGAACGAGAATTGTTGAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACC 5445 Query 5470 ATGAGCCGCAACAATGTTATACGTTTCTTCCTCTTGGCCGAATTTATATCCATAGTTCTG 5529 |||||| || || || ||||| ||||||||||||| |||||| | || | | || Sbjct 5446 ATGAGCGGCTACGATATTATAAGTTTCTTCCTCTTCACCGAATCTGTAACTTTCATTAGC 5505 Query 5530 AGAAGTAAGCCCAGTTGTTTCACGAATGAGCGAAGAAGTAACAAGACTTCCATGCATAGC 5589 ||| | | || ||||| | ||| | ||| || || | | ||||||||||| Sbjct 5506 AGATTCATTTTCTGTGGTTTCCCTAATCAAACTAGAGGTTACCAAAGAACCATGCATAGC 5565 Query 5590 AGCGAACAAAGCTCCACCGAATACCCCAGCAACACCGAGCATGTGGAACGGATGCATAAG 5649 | ||| | | || |||||||| ||||| ||||| |||||||| || || |||||||| Sbjct 5566 ACTGAATAGGGAGCCGCCGAATACACCAGCCACACCTAGCATGTGAAATGGGTGCATAAG 5625 Query 5650 GATATTGTGTTCTGCCTGGAATACGAACATAAAGTTAAAAGTACCAGAGATACCAAGAGG 5709 ||| ||||| || || |||||||| | ||| ||||| |||||||||||||| || ||||| Sbjct 5626 GATGTTGTGCTCAGCTTGGAATACAATCATGAAGTTGAAAGTACCAGAGATTCCTAGAGG 5685 Query 5710 CATACCATCACTGAAACTTCCCTGTCCGAAAGGGTATACTAAAAATACTG-AGTAGGCTG 5768 |||||| ||| || ||||| || || | ||||| | || || || | |||| || | Sbjct 5686 CATACCGTCAGAAAAGCTTCCTTGACCAATTGGGTAGATCAAGAAAACAGCAGTA-GCAG 5744 Query 5769 CGGCAACCGGTGCTGAATATGCTACGCAAATCCATGGTCGCATTCCTAATCTGTAACTAA 5828 | ||||| || ||||||||||| || |||||| || ||||| || | | | |||||| Sbjct 5745 CTGCAACAGGAGCTGAATATGCAACCGCAATCCAAGGGCGCATACCCAGACGGAAACTAA 5804 Query 5829 GTTCCCA 5835 ||||||| Sbjct 5805 GTTCCCA 5811 >seq5638 Length=27578 Score = 320 bits (354), Expect = 5e-83 Identities = 571/826 (69%), Gaps = 13/826 (2%) Strand=Plus/Plus Query 5315 TGATTGAAGTTAAAGCCGTTAAGATTAAAAGCCATAGTGGAGATTCCCATAGAGGTAAGC 5374 |||||||| ||||| || || | || |||| ||||||| || | | || ||| | | Sbjct 21594 TGATTGAAATTAAATCCATTTAAGTTGAAAGTCATAGTGCTAATACTTAAAGCGGTGAAC 21653 Query 5375 CATATGCAAACGACGGGCCAAGTAGCCAGGAAGAAATGTAAACTACGGCTATTGTTAAAG 5434 | || | || || ||||||| ||| | |||||| |||||| ||| |||||| || Sbjct 21654 TAGATACCTACTACAGGCCAAGCAGCTAAGAAGAAGTGTAAAGAACGAGAATTGTTGAAA 21713 Query 5435 CTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATGTTATACGTT 5494 |||||||| |||||||| | || ||||| || |||||||| || || ||||| ||| Sbjct 21714 CTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCTAGTACGATATTATAAGTT 21773 Query 5495 TCTTCCTCTTGGCCGAATTTATATCCATAGTTCTGAGAAGTAAGCCCAGTTGTTTCACGA 5554 ||||||||||| ||||| | || || | || | | | | || ||||| | Sbjct 21774 TCTTCCTCTTGATCGAATCTGTAACCTTCATTAGCAAATACATTTTCTGTGGTTTCCCTG 21833 Query 5555 ATGAGCGAAGAAGTAACAAGACTTCCATGCATAGCAGCGAACAAAGCTCCACCGAATACC 5614 || | ||| | || | | || ||||||||| ||| | | || ||||||| Sbjct 21834 ATCAAACTAGAGATTACCAAAGAACCTTGCATAGCACTGAATAGGGAGCCGTCGAATACA 21893 Query 5615 CCAGCAACACCGAGCATGTGGAACGGATGCATAAGGATATTGTGTTCTGCCTGGAATACG 5674 ||| | ||||| |||||||| || || ||||||||||| ||||| || || |||||||| Sbjct 21894 CCAACCACACCTAGCATGTGAAATGGGTGCATAAGGATGTTGTGCTCAGCTTGGAATACA 21953 Query 5675 AACATAAAGTTAAAAGTACCAGAGATACCAAGAGGCATACCATCACTGAAACTTCCCTGT 5734 | ||| ||||| |||||||||||||| || | |||||||| ||| || ||||| || Sbjct 21954 ATCATGAAGTTGAAAGTACCAGAGATTCCTCGCGGCATACCGTCAGAAAAGCTTCCTTGA 22013 Query 5735 CCGAAAGGGTATACTAAAAATACTG-AGTAGGCTGCGGCAACCGGTGCTGAATATGCTAC 5793 || | ||||| | || || || | |||| | || ||||| || ||||||||||| || Sbjct 22014 CCAATTGGGTAGATCAAGAAAACAGCAGTA-ACAGCTGCAACAGGAGCTGAATATGCAAC 22072 Query 5794 GCAAATCCATGGTCGCATTCCTAATCTGTAACTAAGTTCCCATTGGCGTCCCA---AGTA 5850 |||||| || ||| || | | ||||||||| ||| | || |||| || | Sbjct 22073 AACAATCCAAGGGCGC---CCCAGACGAAAACTAAGTTTCCACTCACGACCCATATAGCA 22129 Query 5851 AGCTGCGATACCAATAAGGAAGTGGAAGACGACGAGTTGGTATGGTCCTCCATTGTAAAG 5910 |||| | | ||| | |||||| | || | || | || || || |||||||| | Sbjct 22130 AGCT---ACAACAAGTATGAAGTGTAGAACAATTAGCTCATAAGGACCACCATTGTATAA 22186 Query 5911 CCATTCATCGAGATTGGCTGCTTCCCAGATGGGATAGAAGTGTAACCCAAT-TGCGTTGG 5969 ||||||| | || ||||||| || || || ||||| || || || | | | Sbjct 22187 TTATTCATCAACGGAAGCCACTTCCCATATTGGGTAAAAGTGCAAACCTATATATGCAGA 22246 Query 5970 AGCTGGGTACAACGGCTCCTGATATGATGTTGTTTCCATAGAGTAGAGATCCTGCGACGG 6029 || | || | |||||| || || || || |||||||| || |||| ||||| | || | Sbjct 22247 AG-TAGGGATAACGGCACCAGAAATAATATTGTTTCCGTAAAGTAAAGATCAAGAAACAG 22305 Query 6030 GTTCACGTATGCCGTCGATGTCGACTGGGGGTGCAGCTACGAATGCTAATATAAATGCAG 6089 |||| || || || || || || || | ||||||| | ||| || | |||||| ||| Sbjct 22306 GTTCGCGAATACCATCAATATCTACCGAAAGTGCAGCAATGAAAGCAATAATAAATACAG 22365 Query 6090 TAGTTGCGGTTAAGAGTGCGGGTATCATTAAGACACCAAACCACCC 6135 ||||||||| || | | || ||||| || |||||||| || || Sbjct 22366 AAGTTGCGGTCAATAAAGTAGGGATCATCAAAACACCAAATCATCC 22411 Score = 80.6 bits (88), Expect = 8e-11 Identities = 64/77 (83%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 5186 TCAGCAGCTGCTAGATCAAGTGGGAAGTTGTGAGCATTTCGTTCGTGCATTACTTCCATA 5245 ||| |||| ||||| || || ||||| || |||||||| ||||| ||||| ||||||||| Sbjct 17952 TCAACAGCAGCTAGGTCTAGAGGGAAATTATGAGCATTACGTTCATGCATAACTTCCATA 17893 Query 5246 CCAAGGTTGGCACGGTT 5262 |||||||| | ||||| Sbjct 17892 CCAAGGTTAGTGCGGTT 17876 >seq11993 Length=12302 Score = 201 bits (222), Expect = 3e-47 Identities = 248/339 (73%), Gaps = 4/339 (1%) Strand=Plus/Minus Query 5186 TCAGCAGCTGCTAGATCAAGTGGGAAGTTGTGAGCATTTCGTTCGTGCATTACTTCCATA 5245 ||| |||| ||||| || || ||||| || |||||||| ||||| |||| ||||||||| Sbjct 10713 TCAACAGCAGCTAGGTCTAGAGGGAAATTATGAGCATTACGTTCATGCAGAACTTCCATA 10654 Query 5246 CCAAGGTTGGCACGGTTCAGGACATCTGCCCAAGTGGGAACGATT----CTACCGCTAGA 5301 |||||||| || ||||| | | ||| | |||||| || | | | ||| | Sbjct 10653 CCAAGGTTAGCGCGGTTAATAATATCAGACCAAGTATTAATTAATTACACAACCTTGACT 10594 Query 5302 GTCAACGACTGACTGATTGAAGTTAAAGCCGTTAAGATTAAAAGCCATAGTGGAGATTCC 5361 ||||| || || ||||||| ||||| || || | || |||| ||||||| ||| || Sbjct 10593 ATCAACTACAGATTGATTGACATTAAATCCATTTAAGTTGAAAGTCATAGTGCTGATACC 10534 Query 5362 CATAGAGGTAAGCCATATGCAAACGACGGGCCAAGTAGCCAGGAAGAAATGTAAACTACG 5421 | || ||| | | | || | || || ||||||| ||| | |||||| |||||| | | Sbjct 10533 TAAAGTGGTGAACTAGATACCTACTACAGGCCAAGCAGCTAAGAAGAAGTGTAAAGAATG 10474 Query 5422 GCTATTGTTAAAGCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAAC 5481 |||||| || |||||||| |||||||| | || ||||| || ||||||| || || Sbjct 10473 AGAATTGTTGAAACTAGCATATTGGAAGATCAATCAGCCAAAATAACCATGAGTGGCTAC 10414 Query 5482 AATGTTATACGTTTCTTCCTCTTGGCCGAATTTATATCC 5520 ||| ||||| |||||||||||||| |||||| | || || Sbjct 10413 AATATTATAAGTTTCTTCCTCTTGACCGAATCTGTAACC 10375 >seq2785 Length=48819 Score = 196 bits (216), Expect = 1e-45 Identities = 247/339 (73%), Gaps = 4/339 (1%) Strand=Plus/Plus Query 5186 TCAGCAGCTGCTAGATCAAGTGGGAAGTTGTGAGCATTTCGTTCGTGCATTACTTCCATA 5245 ||| |||| ||||| | || ||||| || |||||||| ||||| |||| ||||||||| Sbjct 2457 TCAACAGCAGCTAGGTTTAGAGGGAAATTATGAGCATTACGTTCATGCAGAACTTCCATA 2516 Query 5246 CCAAGGTTGGCACGGTTCAGGACATCTGCCCAAGTGGGAACGATT----CTACCGCTAGA 5301 |||||||| || ||||| | | ||| | |||||| || | | | ||| | Sbjct 2517 CCAAGGTTAGCGCGGTTAATAATATCAGACCAAGTATTAATTAATTACACAACCTTAACT 2576 Query 5302 GTCAACGACTGACTGATTGAAGTTAAAGCCGTTAAGATTAAAAGCCATAGTGGAGATTCC 5361 ||||| || || ||||||| ||||| || || | || |||| ||||||| ||| || Sbjct 2577 ATCAACTACAGATTGATTGACATTAAATCCATTTAAGTTGAAAGTCATAGTGCTGATACC 2636 Query 5362 CATAGAGGTAAGCCATATGCAAACGACGGGCCAAGTAGCCAGGAAGAAATGTAAACTACG 5421 | || ||| | | | || | || || ||||||| ||| | |||||| |||||| | | Sbjct 2637 TAAAGCGGTGAACTAGATACCTACTACAGGCCAAGCAGCTAAGAAGAAGTGTAAAGAATG 2696 Query 5422 GCTATTGTTAAAGCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAAC 5481 |||||| || |||||||| |||||||| | || ||||| || |||||||| || || Sbjct 2697 AGAATTGTTGAAACTAGCATATTGGAAGATCAATCAGCCAAAATAACCATGAGCGGCTAC 2756 Query 5482 AATGTTATACGTTTCTTCCTCTTGGCCGAATTTATATCC 5520 ||| ||||| |||||||||||||| | |||| | || || Sbjct 2757 AATATTATAAGTTTCTTCCTCTTGACTGAATCTGTAACC 2795 >seq902 Length=93126 Score = 168 bits (186), Expect = 2e-37 Identities = 186/248 (75%), Gaps = 6/248 (2%) Strand=Plus/Plus Query 5603 CCACCGAATACCCCAGCAACACCGAGCATGTGGAACGGATGCATAAGGATATTGTGTTCT 5662 || |||||||| ||||| ||||| |||||||| || || ||||||||||| ||||| || Sbjct 1250 CCGCCGAATACACCAGCCACACCTAGCATGTGAAATGGGTGCATAAGGATGTTGTGCTCA 1309 Query 5663 GCCTGGAATACGAACATAAAGTTAAAAGTACCAGAGATACCAAGAGGCATACCATCACTG 5722 || |||||||| | ||| ||||| ||||||||| |||| || ||||||||| | ||| Sbjct 1310 GCTTGGAATACAATCATGAAGTTGAAAGTACCAAAGATTCCTAGAGGCATATCGTCAGAA 1369 Query 5723 AAACTTCCCTGTCCGAAAGGGTATACTAAAAATACTGAGTAGGCTGCGGCAACCGGTGCT 5782 || ||||| || || | ||||| | || || || || || ||||| || ||| Sbjct 1370 AAGCTTCCTTGACCAATTGGGTAGATCAAGAAAAC------AGCAGCTGCAACAGGAGCT 1423 Query 5783 GAATATGCTACGCAAATCCATGGTCGCATTCCTAATCTGTAACTAAGTTCCCATTGGCGT 5842 |||||||| || |||||| || ||||| || | | | ||||||||||||| | || Sbjct 1424 GAATATGCAACAGCAATCCAAGGGCGCATACCCAGACGGAAACTAAGTTCCCACTCACGA 1483 Query 5843 CCCAAGTA 5850 |||| ||| Sbjct 1484 CCCATGTA 1491 >seq3447 Length=41424 Score = 161 bits (178), Expect = 3e-35 Identities = 179/235 (76%), Gaps = 4/235 (2%) Strand=Plus/Minus Query 5579 CCATGCATAGCAGCGAACAAAGCTCCACCGAATACCCCAGCAACACCGAGCATGTGGAAC 5638 |||||||||||| ||| | | || |||||||| ||||| ||||| |||||||| || Sbjct 13532 CCATGCATAGCACTGAATAGGGAGCCGCCGAATACACCAGCCACACCTAGCATGTGAAAT 13473 Query 5639 GGATGCATAAGGATATTGTGTTCTGCCTGGAATACGAACATAAAGTTAAAAGTACCAGAG 5698 || ||||||||||| ||||| || || |||||||| | ||| ||||| |||||||||||| Sbjct 13472 GGGTGCATAAGGATGTTGTGCTCAGCTTGGAATACAATCATGAAGTTGAAAGTACCAGAG 13413 Query 5699 ATACCAAGAGGCATACCATCACTGAAACTTCCCTGTCCGAAAGGGTATACTA--AAAATA 5756 || || ||||||||||| ||| || ||||| || || | ||||| | | |||||| Sbjct 13412 ATTCCTAGAGGCATACCGTCAGAAAAGCTTCCTTGACCAATTGGGTAGATCAAGAAAATA 13353 Query 5757 CTGAGTAGGCTGCGGCAACCGGTGCTGAATATGCTACGCAAATCCATGGTCGCAT 5811 |||| | || |||| || ||||||||||| || |||||| || | ||| Sbjct 13352 -ACAGTA-GTAGCTGCAATAGGAGCTGAATATGCAACAGCAATCCAAGGGCACAT 13300 >seq3141 Length=44585 Score = 156 bits (172), Expect = 1e-33 Identities = 271/393 (69%), Gaps = 6/393 (2%) Strand=Plus/Plus Query 5797 AATCCATGGTCGCATTCCTAATCTGTAACTAAGTTCCCATTGGCGTCCCA---AGTAAGC 5853 |||||| || ||||| || | | | || |||||||||| | || |||| ||||||| Sbjct 42628 AATCCAAGGGCGCATACCCAGACGGAAAATAAGTTCCCACTCACGACCCATATAGTAAGC 42687 Query 5854 TGCGATACCAATAAGGAAGTGGAAGACGACGAGTTGGTATGGTCCTCCATTGTAAAGCCA 5913 | | ||||| | |||||| | || | || | || || || || ||||| | ||| Sbjct 42688 TAC---ACCAAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCACCGTTGTATAACCA 42744 Query 5914 TTCATCGAGATTGGCTGCTTCCCAGATGGGATAGAAGTGTAACCCAATTGCGTTGGAGCT 5973 |||||| | ||||||| ||| || || || ||||| || || || || | | Sbjct 42745 TTCATCAACGGAAGCTGCTTTCCATATTGGGTAAAAGTGCAAACCTATAGCTGCAAAAGT 42804 Query 5974 GGGTACAACGGCTCCTGATATGATGTTGTTTCCATAGAGTAGAGATCCTGCGACGGGTTC 6033 || | || ||| | || || || |||||||| || |||| |||||| | || ||||| Sbjct 42805 AGGGATAATGGCACTAGAAATAATATTGTTTCCGTAAAGTAAAGATCCAGAAACAGGTTC 42864 Query 6034 ACGTATGCCGTCGATGTCGACTGGGGGTGCAGCTACGAATGCTAATATAAATGCAGTAGT 6093 ||| || || || || || || || |||||||| | ||| || | |||||| ||| || Sbjct 42865 ACGAATACCATCAATATCTACCGGAGGTGCAGCAATGAAAGCAATAATAAATACAGATGT 42924 Query 6094 TGCGGTTAAGAGTGCGGGTATCATTAAGACACCAAACCACCCCACATAGAGGCGGTTGTT 6153 ||| || || | | || ||||| || ||||||||||| || | || || ||||| | Sbjct 42925 TGCAGTCAATAAAGTAGGGATCATCAAAACACCAAACCATCCAATGTAAAGACGGTTTTC 42984 Query 6154 GGTGCTAGTAACCCAGTCACAGAACTTATCCCA 6186 ||||| || | ||| | ||| || | | |||| Sbjct 42985 AGTGCTGGTTATCCAATTACAAAAGTGACCCCA 43017 >seq63634 Length=978 Score = 150 bits (166), Expect = 5e-32 Identities = 266/385 (69%), Gaps = 7/385 (2%) Strand=Plus/Minus Query 5797 AATCCATGGTCGCATTCCTAATCTGTAACTAAGTTCCCATTGGCGTCCCA---AGTAAGC 5853 |||||| || ||||| || | | | || |||||||||| | || |||| || |||| Sbjct 596 AATCCAAGGGCGCATACCCAGACGGAAATTAAGTTCCCACTCACGACCCATATAGCAAGC 537 Query 5854 TGCGATACCAATAAGGAAGTGGAAGACGACGAGTTGGTATGGTCCTCCATTGTAAAGCCA 5913 ||| ||||| | |||||| | || | || | | || || || ||||| | || Sbjct 536 TGC---ACCAAGTAAGAAGTGTAGAACAATTAGCTCACAAGGACCACCGTTGTATAATCA 480 Query 5914 TTCATCGAGATTGGCTGCTTCCCAGATGGGATAGAAGTGTAACCCAATTGCGTTGGAGCT 5973 |||||||| || |||||||| || || || ||||| || || || || || | Sbjct 479 TTCATCGACGGAAGCCGCTTCCCATATTGGGTAAAAGTGCAAACCTATAGCTGCAGAAGT 420 Query 5974 GGGTACAACGGCTCCTGATATGATGTT-GTTTCCATAGAGTAGAGATCCTGCGACGGGTT 6032 || | || ||| || || || || || |||||| || |||| |||||| | || |||| Sbjct 419 AGGGATAATGGCACCAGAAATAATATTTGTTTCCCTAAAGTAAAGATCCAGAAACAGGTT 360 Query 6033 CACGTATGCCGTCGATGTCGACTGGGGGTGCAGCTACGAATGCTAATATAAATGCAGTAG 6092 |||| || || || || | || || |||||||| | ||| || | |||||| ||| | Sbjct 359 CACGAATACCATCAATATGTACCGGAGGTGCAGCAATGAAAGCAATAATAAATACAGAAA 300 Query 6093 TTGCGGTTAAGAGTGCGGGTATCATTAAGACACCAAACCACCCCACATAGAGGCGGTTGT 6152 ||||||| || | | || ||||| || ||||||||||| || | || || ||||| | Sbjct 299 TTGCGGTCAATAAAGTAGGGATCATCAAAACACCAAACCATCCAATGTAAAGACGGTTTT 240 Query 6153 TGGTGCTAGTAACCCAGTCACAGAA 6177 ||||| || | ||| | ||| || Sbjct 239 CAGTGCTGGTTATCCAATTACAAAA 215 >seq105467 Length=471 Score = 116 bits (128), Expect = 1e-21 Identities = 167/235 (71%), Gaps = 4/235 (2%) Strand=Plus/Minus Query 5186 TCAGCAGCTGCTAGATCAAGTGGGAAGTTGTGAGCATTTCGTTCGTGCATTACTTCCATA 5245 ||| |||| ||||| | || ||||| || |||||||| ||||| |||| ||||||||| Sbjct 240 TCAACAGCAGCTAGGTTTAGAGGGAAATTATGAGCATTACGTTCATGCAGAACTTCCATA 181 Query 5246 CCAAGGTTGGCACGGTTCAGGACATCTGCCCAAGTGGGAACGATT----CTACCGCTAGA 5301 |||||||| || ||||| | | ||| | |||||| || | | | ||| | Sbjct 180 CCAAGGTTAGCGCGGTTAATAATATCAGACCAAGTATTAATTAATTACACAACCTTAACT 121 Query 5302 GTCAACGACTGACTGATTGAAGTTAAAGCCGTTAAGATTAAAAGCCATAGTGGAGATTCC 5361 ||||| || || ||||||| ||||| || || | || |||| ||||||| ||| || Sbjct 120 ATCAACTACAGATTGATTGACATTAAATCCATTTAAGTTGAAAGTCATAGTGCTGATACC 61 Query 5362 CATAGAGGTAAGCCATATGCAAACGACGGGCCAAGTAGCCAGGAAGAAATGTAAA 5416 | || ||| | | | || | || || ||||||| ||| | |||||| |||||| Sbjct 60 TAAAGCGGTGAACTAGATACCTACTACAGGCCAAGCAGCTAAGAAGAAGTGTAAA 6 >seq136643 Length=350 Score = 105 bits (116), Expect = 2e-18 Identities = 158/220 (72%), Gaps = 6/220 (3%) Strand=Plus/Plus Query 5186 TCAGCAGCTGCTAGATCAAGTGGGAAGTTGTGAGCATTTCGTTCGTGCATTACTTCCATA 5245 ||| ||| ||||| || || ||||| || |||||||| ||||| |||| ||||||||| Sbjct 132 TCAACAGTAGCTAGGTCTAGAGGGAAATTATGAGCATTACGTTCTTGCAGAACTTCCATA 191 Query 5246 CCAAGGTTGGCACGGTTCAGGACATCTGCCCAAGTGGGAACGATTCTAC-CG--CTAGA- 5301 ||||||| || | ||| | | ||| |||||||| || | | ||| || || || Sbjct 192 CCAAGGTCAGCGCAGTTAATAATATCAGCCCAAGTATTAATTAAT-TACACGACCTTGAC 250 Query 5302 -GTCAACGACTGACTGATTGAAGTTAAAGCCGTTAAGATTAAAAGCCATAGTGGAGATTC 5360 ||||| || || ||| |||| ||||| || || | || |||||||||||| ||| | Sbjct 251 TATCAACTACAGATTGACTGAAATTAAATCCATTTAAGTTGAAAGCCATAGTGCTGATAC 310 Query 5361 CCATAGAGGTAAGCCATATGCAAACGACGGGCCAAGTAGC 5400 | | || ||| | | | || | || || ||||||| ||| Sbjct 311 CTAAAGTGGTGAACTAGATACCTACTACAGGCCAAGCAGC 350 >seq7201 Length=21985 Score = 100 bits (110), Expect = 9e-17 Identities = 79/95 (83%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 5186 TCAGCAGCTGCTAGATCAAGTGGGAAGTTGTGAGCATTTCGTTCGTGCATTACTTCCATA 5245 ||| |||| ||||| || || ||||| || |||||||| ||||| ||||| ||||||||| Sbjct 1417 TCAACAGCAGCTAGGTCTAGAGGGAAATTATGAGCATTACGTTCATGCATAACTTCCATA 1476 Query 5246 CCAAGGTTGGCACGGTTCAGGACATCTGCCCAAGT 5280 |||||||| || ||||||| | ||| |||||||| Sbjct 1477 CCAAGGTTAGCGCGGTTCATAATATCAGCCCAAGT 1511 >seq140248 Length=342 Score = 98.7 bits (108), Expect = 3e-16 Identities = 90/114 (79%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 5392 CCAAGTAGCCAGGAAGAAATGTAAACTACGGCTATTGTTAAAGCTAGCATACTGGAAGAT 5451 ||||| ||| | |||||| |||||| ||| |||||| || |||||||| ||||| || Sbjct 229 CCAAGCAGCTAAGAAGAAGTGTAAAGAACGAGAATTGTTGAAACTAGCATATTGGAATAT 288 Query 5452 GAGTCTCCCAAAGTAGCCATGAGCCGCAACAATGTTATACGTTTCTTCCTCTTG 5505 | || ||||| || |||||||| || || || ||||| |||||||||||||| Sbjct 289 CAATCGGCCAAAATAACCATGAGCGGCTACGATATTATAAGTTTCTTCCTCTTG 342 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 152091516115392