Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rosa_20x_20damascena_20[genbank_20GCA_5F001662545.1_202016-06-13] 307,872 sequences; 711,719,955 total letters Query= NC_020865.1 Length=45730 Score E Sequences producing significant alignments: (Bits) Value seq11001 307 3e-79 seq5638 307 3e-79 seq2785 174 5e-39 seq11993 168 2e-37 seq902 161 3e-35 seq3447 138 3e-28 seq3141 132 1e-26 seq63634 113 1e-20 seq140248 95.1 4e-15 seq31866 80.6 8e-11 >seq11001 Length=13740 Score = 307 bits (340), Expect = 3e-79 Identities = 396/545 (73%), Gaps = 1/545 (0%) Strand=Plus/Minus Query 41556 TTGCTTACATGGGACGAGAGTGGGAACTTAGCTATCGACTAGGGATGAGGCCCTGGATCT 41615 ||||| | ||||| | |||||||||||||| | || || || ||| | || ||||| Sbjct 5830 TTGCT-ATATGGGTTGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGATTG 5772 Query 41616 TTGTTGCGTACTCTGCTCCTGTCGCCGCTGCGACTGCTGTGTTCCTTGTTTATCCGTTTG 41675 ||||| || || |||||||| || ||||| |||||||| ||| | | || || ||| Sbjct 5771 CGGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATCTACCCAATTG 5712 Query 41676 GACAGGGCTCTTTTTCTGATGCTATGCCCTTGGGGATATCCGGCACCTTCAACTACATGC 41735 | || || |||||||| | |||||| | || || || || || ||||||| |||| Sbjct 5711 GTCAAGGAAGCTTTTCTGACGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATGA 5652 Query 41736 TGGTGTTCCAGGCTGAGCACAATATTCTTATGCATCCTTTTCACATGCTGGGTGTGGCCG 41795 | || ||||| ||||||||||| || |||||||| || ||||||||||| |||||||| | Sbjct 5651 TTGTATTCCAAGCTGAGCACAACATCCTTATGCACCCATTTCACATGCTAGGTGTGGCTG 5592 Query 41796 GCGTATTTGGTGGGAGTTTGTTCTCTGCTATGCACGGTAGCCTGGTCACGTCGTCACTCA 41855 | ||||| || || | ||| ||||||||| ||| |||| || || | | Sbjct 5591 GTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCTTTGGTAACCTCTAGTTTGA 5532 Query 41856 TTCGTGAGACGACTGAAGAGGTTTCACAGAACTATGGTTACAAGTTTGGTCAAGAGGAAG 41915 || | || || || ||| | | || || | |||||| || ||| ||||||||| Sbjct 5531 TTAGGGAAACCACAGAAAATGAATCTGCTAATGAAAGTTACAGATTCGGTGAAGAGGAAG 5472 Query 41916 AGACTTACAATATTGTTGCTGCTCACGGCTATTTTGGTCGGCTTATCTTCCAATATGCTA 41975 | ||||| ||||| || || ||||| || |||||||| || | |||||||||||||||| Sbjct 5471 AAACTTATAATATCGTAGCCGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTA 5412 Query 41976 GCTTTAATAATTCCCGTAGTCTTCATTTCTTTCTTGCTGCCTGGCCTGTTGTAGGTATTT 42035 | || || ||||| ||| | | || ||||| | ||||| |||||||| |||||||| | Sbjct 5411 GTTTCAACAATTCTCGTTCTTTACACTTCTTCTTAGCTGCTTGGCCTGTAGTAGGTATCT 5352 Query 42036 GGTTTGCTGCGCTTGGCGTGTCTACCATGGCTTTCAACTTGAATGGTTTCAACTTTAACC 42095 |||| | || | || | || |||||||||||||| ||||| || || || || | Sbjct 5351 GGTTCACCGCTTTAGGTATAAGCACTATGGCTTTCAACTTAAATGGATTTAATTTCAATC 5292 Query 42096 AATCT 42100 ||||| Sbjct 5291 AATCT 5287 >seq5638 Length=27578 Score = 307 bits (340), Expect = 3e-79 Identities = 579/842 (69%), Gaps = 17/842 (2%) Strand=Plus/Minus Query 41266 TCTTTATGTAGGATGGTTCGGAGTCCTTATGATTCCGTGCCTCCTTG-CCGCTACAACTT 41324 |||||| | ||||| || || || | ||||| || | | | ||| |||| || || Sbjct 22421 TCTTTACATTGGATGATTTGGTGTTTTGATGATCCC-TACTTTATTGACCGCAACTTCTG 22363 Query 41325 GTTTTATTATCGCCTTTGTTGGCGCACCACCTGTTGACATCGATGGAATCCGAGAACCCG 41384 |||||||| || || ||| |||| | || || || ||||| || || ||||| | Sbjct 22362 TATTTATTATTGCTTTCATTGCTGCACTTTCGGTAGATATTGATGGTATTCGCGAACCTG 22303 Query 41385 TCGCTGGCTCCCTGTTGTATGGTAACAACATCATATCAGGAGCCGTCGTTCCGAGCAGTA 41444 | || | || | | || || ||||| || || || || ||||| | || | | Sbjct 22302 TTTCTTGATCTTTACTTTACGGAAACAATATTATTTCTGGTGCCGTTATCCCTAC---TT 22246 Query 41445 ATGCC---ATCGGACTACACTTCTACCCAATTTGGGAAGCTGCTACACTTGATGAATGGC 41501 ||| || || | ||||| |||||||| ||||||| ||| | ||||||||| Sbjct 22245 CTGCATATATAGGTTTGCACTTTTACCCAATATGGGAAGTGGCTTCCGTTGATGAATAAT 22186 Query 41502 TGTACAACGGCGGTCCATTCCAACTCACCGTATTCCACTTCCTCATTGGCGTCT-TTGCT 41560 | ||||| || ||||| | | || | || | |||||| | ||| || ||||| Sbjct 22185 TATACAATGGTGGTCCTTATGAGCTAATTGTTCTACACTTCATACTTGTTGTAGCTTGCT 22126 Query 41561 TACATGGGACGAGAGTGGGAACTTAGCTATCGACTAGGGATGAGGCCCTGGATCTTTGTT 41620 | ||||| || |||||| ||||||| | ||| || ||| | || ||||| ||||| Sbjct 22125 -ATATGGGTCGTGAGTGGAAACTTAGTTTTCGTCTGGGGC---GCCCTTGGATTGTTGTT 22070 Query 41621 GCGTACTCTGCTCCTGTCGCCGCTGCGACTGCTGTGTTCCTTGTTTATCCGTTTGGACAG 41680 || || || |||||||| || |||| |||||||| ||| | | || || |||| || Sbjct 22069 GCATATTCAGCTCCTGTTGCAGCTGTTACTGCTGTTTTCTTGATCTACCCAATTGGTCAA 22010 Query 41681 GGCTCTTTTTCTGATGCTATGCCCTTGGGGATATCCGGCACCTTCAACTACATGCTGGTG 41740 || |||||||| | |||||| || || || || || ||||||| |||| | || Sbjct 22009 GGAAGCTTTTCTGACGGTATGCCGCGAGGAATCTCTGGTACTTTCAACTTCATGATTGTA 21950 Query 41741 TTCCAGGCTGAGCACAATATTCTTATGCATCCTTTTCACATGCTGGGTGTGGCCGGCGTA 41800 ||||| ||||||||||| || |||||||| || ||||||||||| ||||||| || ||| Sbjct 21949 TTCCAAGCTGAGCACAACATCCTTATGCACCCATTTCACATGCTAGGTGTGGTTGGTGTA 21890 Query 41801 TTTGGTGGGAGTTTGTTCTCTGCTATGCACGGTAGCCTGGTCACGTCGTCACTCATTCGT 41860 || | || | ||| ||||||||| ||| |||| | || | || | Sbjct 21889 TTCGACGGCTCCCTATTCAGTGCTATGCAAGGTTCTTTGGTAATCTCTAGTTTGATCAGG 21830 Query 41861 GAGACGACTGAAGAGGTTTCACAGAACTATGGTTACAAGTTTGGTCAAGAGGAAGAGACT 41920 || || || ||| | || | || | ||||||| || | |||||||||||| ||| Sbjct 21829 GAAACCACAGAAAATGTATTTGCTAATGAAGGTTACAGATTCGATCAAGAGGAAGAAACT 21770 Query 41921 TACAATATTGTTGCTGCTCACGGCTATTTTGGTCGGCTTATCTTCCAATATGCTAGCTTT 41980 || ||||| || ||||| || |||||||| || | ||||||||||||||||| || Sbjct 21769 TATAATATCGTACTAGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTC 21710 Query 41981 AATAATTCCCGTAGTCTTCATTTCTTTCTTGCTGCCTGGCCTGTTGTAGGTATTTGGTTT 42040 || ||||| ||| | | || ||||| | ||||| |||||||| |||||||| | ||| Sbjct 21709 AACAATTCTCGTTCTTTACACTTCTTCTTAGCTGCTTGGCCTGTAGTAGGTATCTAGTT- 21651 Query 42041 GCTGCGCTTGGCGTGT--CTACCATGGCTTTCAACTTGAATGGTTTCAACTTTAACCAAT 42098 | ||||| || | || ||| |||||||||| ||||| || || || || ||| Sbjct 21650 -CACCGCTTTAAGTATTAGCACTATGACTTTCAACTTAAATGGATTTAATTTCAATCAAG 21592 Query 42099 CT 42100 || Sbjct 21591 CT 21590 >seq2785 Length=48819 Score = 174 bits (192), Expect = 5e-39 Identities = 239/332 (72%), Gaps = 8/332 (2%) Strand=Plus/Minus Query 41891 GGTTACAAGTTTGGTCAAGAGGAAGAGACTTACAATATTGTTGCTGCTCACGGCTATTTT 41950 ||||||| || ||||||||||||| ||||| |||||||| || ||||| || |||||| Sbjct 2795 GGTTACAGATTCAGTCAAGAGGAAGAAACTTATAATATTGTAGCCGCTCATGGTTATTTT 2736 Query 41951 GGTCGGCTTATCTTCCAATATGCTAGCTTTAATAATTCCCGTAGTCTTCATTTCTTTCTT 42010 || | | ||||||||||||||||| || || ||||| | | | | || ||||| | Sbjct 2735 GGCTGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCATTCTTTACACTTCTTCTTA 2676 Query 42011 GCTGCCTGGCCTGTTGTAGGTATTTGGTTTGCTGCGCTTGGCGTGTC--TACCATGGCTT 42068 ||||| |||||||| |||||||| | ||| | ||||| || || || ||| ||| Sbjct 2675 GCTGCTTGGCCTGTAGTAGGTATCTAGTT--CACCGCTTTAGGTATCAGCACTATGACTT 2618 Query 42069 TCAACTTGAATGGTTTCAACTTTAACCAATCT----CTGCTAGCTGCTGATGGACAGGTG 42124 ||||||| ||||| || || | || |||||| || ||| | | || | | Sbjct 2617 TCAACTTAAATGGATTTAATGTCAATCAATCTGTAGTTGATAGTTAAGGTTGTGTAATTA 2558 Query 42125 ATCAACACCTGGGCTGACATTCTTAACCGTGCCAACCTTGGCTTTGAGGTGATGCATGAG 42184 || || || ||| |||| ||| ||||||| || |||||||| | || || ||||||| Sbjct 2557 ATTAATACTTGGTCTGATATTATTAACCGCGCTAACCTTGGTATGGAAGTTCTGCATGAA 2498 Query 42185 CGGAACGCACACAACTTCCCGCTTGACCTTGC 42216 || || || || || ||||| || |||| || Sbjct 2497 CGTAATGCTCATAATTTCCCTCTAAACCTAGC 2466 >seq11993 Length=12302 Score = 168 bits (186), Expect = 2e-37 Identities = 238/332 (72%), Gaps = 8/332 (2%) Strand=Plus/Plus Query 41891 GGTTACAAGTTTGGTCAAGAGGAAGAGACTTACAATATTGTTGCTGCTCACGGCTATTTT 41950 ||||||| || |||||||||||||| ||||| |||||||| || |||| || |||||| Sbjct 10375 GGTTACAGATTCGGTCAAGAGGAAGAAACTTATAATATTGTAGCCACTCATGGTTATTTT 10434 Query 41951 GGTCGGCTTATCTTCCAATATGCTAGCTTTAATAATTCCCGTAGTCTTCATTTCTTTCTT 42010 || | | ||||||||||||||||| || || ||||| | | | | || ||||| | Sbjct 10435 GGCTGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCATTCTTTACACTTCTTCTTA 10494 Query 42011 GCTGCCTGGCCTGTTGTAGGTATTTGGTTTGCTGCGCTTGGCGTGTC--TACCATGGCTT 42068 ||||| |||||||| |||||||| | ||| | | ||| || || || ||| ||| Sbjct 10495 GCTGCTTGGCCTGTAGTAGGTATCTAGTT--CACCACTTTAGGTATCAGCACTATGACTT 10552 Query 42069 TCAACTTGAATGGTTTCAACTTTAACCAATCT----CTGCTAGCTGCTGATGGACAGGTG 42124 ||||||| ||||| || || | || |||||| || ||| | || | | Sbjct 10553 TCAACTTAAATGGATTTAATGTCAATCAATCTGTAGTTGATAGTCAAGGTTGTGTAATTA 10612 Query 42125 ATCAACACCTGGGCTGACATTCTTAACCGTGCCAACCTTGGCTTTGAGGTGATGCATGAG 42184 || || || ||| |||| ||| ||||||| || |||||||| | || || ||||||| Sbjct 10613 ATTAATACTTGGTCTGATATTATTAACCGCGCTAACCTTGGTATGGAAGTTCTGCATGAA 10672 Query 42185 CGGAACGCACACAACTTCCCGCTTGACCTTGC 42216 || || || || || ||||| || ||||| || Sbjct 10673 CGTAATGCTCATAATTTCCCTCTAGACCTAGC 10704 >seq902 Length=93126 Score = 161 bits (178), Expect = 3e-35 Identities = 188/253 (74%), Gaps = 7/253 (3%) Strand=Plus/Minus Query 41556 TTGCTTACATGGGACGAGAGTGGGAACTTAGCTATCGACTAGGGATGAGGCCCTGGATCT 41615 ||||| ||||||| || |||||||||||||| | || || || ||| | || ||||| Sbjct 1495 TTGCT-ACATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGATTG 1437 Query 41616 TTGTTGCGTACTCTGCTCCTGTCGCCGCTGCGACTGCTGTGTTCCTTGTTTATCCGTTTG 41675 |||||| || || |||||||| || ||||| ||| ||| | | || || ||| Sbjct 1436 CTGTTGCATATTCAGCTCCTGTTGCAGCTGC------TGTTTTCTTGATCTACCCAATTG 1383 Query 41676 GACAGGGCTCTTTTTCTGATGCTATGCCCTTGGGGATATCCGGCACCTTCAACTACATGC 41735 | || || |||||||| | |||||| | || || | || || ||||||| |||| Sbjct 1382 GTCAAGGAAGCTTTTCTGACGATATGCCTCTAGGAATCTTTGGTACTTTCAACTTCATGA 1323 Query 41736 TGGTGTTCCAGGCTGAGCACAATATTCTTATGCATCCTTTTCACATGCTGGGTGTGGCCG 41795 | || ||||| ||||||||||| || |||||||| || ||||||||||| |||||||| | Sbjct 1322 TTGTATTCCAAGCTGAGCACAACATCCTTATGCACCCATTTCACATGCTAGGTGTGGCTG 1263 Query 41796 GCGTATTTGGTGG 41808 | ||||| || || Sbjct 1262 GTGTATTCGGCGG 1250 >seq3447 Length=41424 Score = 138 bits (152), Expect = 3e-28 Identities = 171/234 (73%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 41600 ATGAGGCCCTGGATCTTTGTTGCGTACTCTGCTCCTGTCGCCGCTGCGACTGCTGTGTTC 41659 ||| | || ||||| |||||| || || |||||| | || ||| | |||| | | ||| Sbjct 13300 ATGTGCCCTTGGATTGCTGTTGCATATTCAGCTCCTATTGCAGCTACTACTGTTATTTTC 13359 Query 41660 CTTGTTTATCCGTTTGGACAGGGCTCTTTTTCTGATGCTATGCCCTTGGGGATATCCGGC 41719 | | || || |||| || || |||||||| | |||||| | || || || || Sbjct 13360 TTGATCTACCCAATTGGTCAAGGAAGCTTTTCTGACGGTATGCCTCTAGGAATCTCTGGT 13419 Query 41720 ACCTTCAACTACATGCTGGTGTTCCAGGCTGAGCACAATATTCTTATGCATCCTTTTCAC 41779 || ||||||| |||| | || ||||| ||||||||||| || |||||||| || |||||| Sbjct 13420 ACTTTCAACTTCATGATTGTATTCCAAGCTGAGCACAACATCCTTATGCACCCATTTCAC 13479 Query 41780 ATGCTGGGTGTGGCCGGCGTATTTGGTGGGAGTTTGTTCTCTGCTATGCACGGT 41833 ||||| |||||||| || ||||| || || | ||| ||||||||| ||| Sbjct 13480 ATGCTAGGTGTGGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGT 13533 >seq3141 Length=44585 Score = 132 bits (146), Expect = 1e-26 Identities = 273/402 (68%), Gaps = 8/402 (2%) Strand=Plus/Minus Query 41225 TGGGAGCAGTTTTGTTCCTGGGTCACCTCTACTAATAACCGTCTTTATGTAGGATGGTTC 41284 |||| || |||||| ||| | ||| ||| | ||||||||||| | |||||||| Sbjct 43017 TGGGGTCACTTTTGTAATTGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTT 42958 Query 41285 GGAGTCCTTATGATTCCGTGCCTCCTTGCC-GCTACAACTTGTTTTATTATCGCCTTTGT 41343 || || | ||||| || | | | ||| | || ||| || |||||||| || || | Sbjct 42957 GGTGTTTTGATGATCCC-TACTTTATTGACTGCAACATCTGTATTTATTATTGCTTTCAT 42899 Query 41344 TGGCGCACCACCTGTTGACATCGATGGAATCCGAGAACCCGTCGCTGGCTCCCTGTTGTA 41403 || ||||| || || || || ||||| || || ||||| || |||| || | | || Sbjct 42898 TGCTGCACCTCCGGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTTTACTTTA 42839 Query 41404 TGGTAACAACATCATATCAGGAGCCGTCGTTCCGAGCAGTAATGCCATCGGACTACACTT 41463 || ||||| || || || | ||| | | || | | || || || | ||||| Sbjct 42838 CGGAAACAATATTATTTCTAGTGCCATTATCCCTACTTTTGCAGCTATAGGTTTGCACTT 42779 Query 41464 CTACCCAATTTGGGAAGCTGCTACACTTGATGAATGGCTGTACAACGGCGGTCCATTCCA 41523 |||||||| ||| |||| ||| | ||||||||||| | |||||||| ||||| | | Sbjct 42778 TTACCCAATATGGAAAGCAGCTTCCGTTGATGAATGGTTATACAACGGTGGTCCTTATGA 42719 Query 41524 ACTCACCGTATTCCACTTCCTCATTGGCGTCTTTGCTTAC---ATGGGACGAGAGTGGGA 41580 || | || | |||||| | |||| || |||||| ||||| || |||||||| Sbjct 42718 GCTAATTGTTCTACACTTCTTACTTGGTGTA---GCTTACTATATGGGTCGTGAGTGGGA 42662 Query 41581 ACTTAGCTATCGACTAGGGATGAGGCCCTGGATCTTTGTTGC 41622 ||||| | || || || ||| | || ||||| |||||| Sbjct 42661 ACTTATTTTCCGTCTGGGTATGCGCCCTTGGATTGCTGTTGC 42620 >seq63634 Length=978 Score = 113 bits (124), Expect = 1e-20 Identities = 264/392 (67%), Gaps = 5/392 (1%) Strand=Plus/Plus Query 41234 TTTTGTTCCTGGGTCACCTCTACTAATAACCGTCTTTATGTAGGATGGTTCGGAGTCCTT 41293 |||||| ||| | ||| ||| | ||||||||||| | |||||||| || || | Sbjct 215 TTTTGTAATTGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 274 Query 41294 ATGATTCCGTGCCTCCTTG-CCGCTACAACTTGTTTTATTATCGCCTTTGTTGGCGCACC 41352 ||||| || | | | ||| |||| | || |||||||| || || ||| ||||| Sbjct 275 ATGATCCC-TACTTTATTGACCGCAATTTCTGTATTTATTATTGCTTTCATTGCTGCACC 333 Query 41353 ACCTGTTGACATCGATGGAATCCGAGAACCCGTCGCTGGCTCCCTGTTGTATGGTAACAA 41412 || || | || ||||| || || ||||| || |||| || | | || || ||||| Sbjct 334 TCCGGTACATATTGATGGTATTCGTGAACCTGTTTCTGGATCTTTACTTTAGGGAAACAA 393 Query 41413 C-ATCATATCAGGAGCCGTCGTTCCGAGCAGTAATGCCATCGGACTACACTTCTACCCAA 41471 || || || || ||| | | || | | || || || | ||||| ||||||| Sbjct 394 ATATTATTTCTGGTGCCATTATCCCTACTTCTGCAGCTATAGGTTTGCACTTTTACCCAA 453 Query 41472 TTTGGGAAGCTGCTACACTTGATGAATGGCTGTACAACGGCGGTCCATTCCAACTCACCG 41531 | |||||||| ||| | | |||||||| | |||||||| ||||| | | || | | Sbjct 454 TATGGGAAGCGGCTTCCGTCGATGAATGATTATACAACGGTGGTCCTTGTGAGCTAATTG 513 Query 41532 TATTCCACTTCCTCATTGGCGTCT-TTGCTTACATGGGACGAGAGTGGGAACTTAGCTAT 41590 | | |||||| | |||| | ||||| | ||||| || ||||||||||||| | Sbjct 514 TTCTACACTTCTTACTTGGTGCAGCTTGCT-ATATGGGTCGTGAGTGGGAACTTAATTTC 572 Query 41591 CGACTAGGGATGAGGCCCTGGATCTTTGTTGC 41622 || || || ||| | || ||||| |||||| Sbjct 573 CGTCTGGGTATGCGCCCTTGGATTGCTGTTGC 604 >seq140248 Length=342 Score = 95.1 bits (104), Expect = 4e-15 Identities = 91/117 (78%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 41906 CAAGAGGAAGAGACTTACAATATTGTTGCTGCTCACGGCTATTTTGGTCGGCTTATCTTC 41965 ||||||||||| ||||| ||||| || || ||||| || |||||||| || | || ||| Sbjct 342 CAAGAGGAAGAAACTTATAATATCGTAGCCGCTCATGGTTATTTTGGCCGATTGATATTC 283 Query 41966 CAATATGCTAGCTTTAATAATTCCCGTAGTCTTCATTTCTTTCTTGCTGCCTGGCCT 42022 ||||||||||| || || ||||| ||| | | || ||||| | ||||| ||| || Sbjct 282 CAATATGCTAGTTTCAACAATTCTCGTTCTTTACACTTCTTCTTAGCTGCTTGGTCT 226 >seq31866 Length=2350 Score = 80.6 bits (88), Expect = 8e-11 Identities = 124/177 (70%), Gaps = 0/177 (0%) Strand=Plus/Plus Query 41341 TGTTGGCGCACCACCTGTTGACATCGATGGAATCCGAGAACCCGTCGCTGGCTCCCTGTT 41400 ||||| | ||| || || || || ||||| || || ||||| || |||| || | | Sbjct 1800 TGTTGATGGACCTCCGGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTTTACT 1859 Query 41401 GTATGGTAACAACATCATATCAGGAGCCGTCGTTCCGAGCAGTAATGCCATCGGACTACA 41460 || || ||||| || || || || ||| | | || | | || || || | || Sbjct 1860 TTACGGAAACAATATTATTTCTGGTGCCATTATCCCTACTTCTGCAGCTATAGGTTTGCA 1919 Query 41461 CTTCTACCCAATTTGGGAAGCTGCTACACTTGATGAATGGCTGTACAACGGCGGTCC 41517 ||| |||||||| |||||||| ||| | ||||||||||| | |||||||| ||||| Sbjct 1920 CTTTTACCCAATATGGGAAGCGGCTTCCGTTGATGAATGGTTATACAACGGTGGTCC 1976 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 145679843077888