Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rosa_20x_20damascena_20[genbank_20GCA_5F001662545.1_202016-06-13] 307,872 sequences; 711,719,955 total letters Query= NC_020878.1 Length=44945 Score E Sequences producing significant alignments: (Bits) Value seq5638 266 9e-67 seq11001 259 1e-64 seq3141 176 1e-39 seq63634 150 5e-32 seq902 150 5e-32 seq11993 143 8e-30 seq2785 141 3e-29 seq3447 138 3e-28 seq31866 105 2e-18 seq136643 100 8e-17 seq105467 95.1 3e-15 >seq5638 Length=27578 Score = 266 bits (294), Expect = 9e-67 Identities = 620/921 (67%), Gaps = 27/921 (3%) Strand=Plus/Plus Query 40604 AACATCAGCCCAAGTAGGAATGACTTTACCATTAGCGTCT--ACTACTGACTGGTTAAAG 40661 || ||||||||||||| ||| || || | | | ||| | ||| | || || || Sbjct 21546 AATATCAGCCCAAGTATTAATTAC---ACGACTTGACTCTCAAATACAGCTTGATTGAAA 21602 Query 40662 TTAAAACCATTGAGGTTAAAAGCCATAGTAGATATACCCATGGAGGTAAGCCATATGCCA 40721 ||||| ||||| | ||| |||| |||||| |||| | | ||| | | | || || Sbjct 21603 TTAAATCCATTTAAGTTGAAAGTCATAGTGCTAATACTTAAAGCGGTGAACTAGATACCT 21662 Query 40722 ATAACCGGGAAAGCACCAAGAAAGAAGTGTAGCGCACGGCTATTGTTGAATGAAGCATAT 40781 | || || ||||| | | |||||||||| | ||| ||||||||| ||||||| Sbjct 21663 ACTACAGGCCAAGCAGCTAAGAAGAAGTGTAAAGAACGAGAATTGTTGAAACTAGCATAT 21722 Query 40782 TGAAATATTAGTCTACCAAAGTAACCGTGTGCAGCTACGATGTTATAAGTCTCGCCTTCC 40841 || || || | || ||||| ||||| || || |||||| |||||||| || | || Sbjct 21723 TGGAAGATCAATCGGCCAAAATAACCATGAGCTAGTACGATATTATAAGTTTCTTCCTCT 21782 Query 40842 TGACCAAACTTATACCCGTAGTTCTGTGATTCAGTTTCCGTGGTCTCCCGAATGA---TT 40898 ||| | || | || || | || || || |||| ||||| |||| || | | Sbjct 21783 TGATCGAATCTGTAACCTTCATTAGCAAATACATTTTCTGTGGTTTCCCTGATCAAACTA 21842 Query 40899 GAGGAAGTAACAAGGCTTCCGTGCATAGCAGCAAACAAAGCACCACCAAAGACGCCTGCA 40958 ||| | || ||| | || ||||||||| || | | || | || || || | Sbjct 21843 GAG--ATTACCAAAGAA-CCTTGCATAGCACTGAATAGGGAGCCGTCGAATACACCAACC 21899 Query 40959 ACGCCGAGCATATGGAATGGGTGCATGAGAATGTTGTGTTCTGCTTGGAAGACAAACATG 41018 || || ||||| || ||||||||||| || |||||||| || |||||||| |||| |||| Sbjct 21900 ACACCTAGCATGTGAAATGGGTGCATAAGGATGTTGTGCTCAGCTTGGAATACAATCATG 21959 Query 41019 AAGTTGAATGTTCCACTGATTCCTAAAGGCATACCATCAGAGAAAGAACCCTGACCGAAT 41078 |||||||| || ||| ||||||| |||||||| ||||| || || ||||| | | Sbjct 21960 AAGTTGAAAGTACCAGAGATTCCTCGCGGCATACCGTCAGAAAAGCTTCCTTGACCAATT 22019 Query 41079 GGATAAACTAAGAATACAGCTAGAGCTGCTGACAATGGAGCTGTGTATGCCACAAATATC 41138 || || | ||||| ||||| | | |||| | ||||||| ||||| |||| ||| Sbjct 22020 GGGTAGATCAAGAAAACAGCAGTAACAGCTGCAACAGGAGCTGAATATGCAACAACAATC 22079 Query 41139 CATGGTCTCATACCTAGTCTGTATGAAAGTTCCCACTGTCTACCAGCGTAT-GC-TGCTA 41196 || || | | || || | | ||||| ||||| | ||| | ||| || |||| Sbjct 22080 CAAGGGCGC---CCCAGACGAAAACTAAGTTTCCACTCACGACC--CATATAGCAAGCTA 22134 Query 41197 CTCCTATTAAAAAGTGAAAGACAATGAGTTGATATGGTCCGCCGTTGTATAGCCACTCGT 41256 | | | || ||||| | ||||| || | ||| || || || ||||||| | || | Sbjct 22135 CAACAAGTATGAAGTGTAGAACAATTAGCTCATAAGGACCACCATTGTATAATTATTCAT 22194 Query 41257 CCAGTGTGCCGGCTTCCCAGATTGGGTAGAAATGTAGTCCGAT---TGCGTTAGAGCTCG 41313 | | | | ||||||| |||||||| || || | || || ||| ||| | | Sbjct 22195 CAACGGAAGCCACTTCCCATATTGGGTAAAAGTGCAAACCTATATATGC---AGAAGTAG 22251 Query 41314 GAACGACAGCTCCAGATATAATATTGTTCCCGTACATTAACGAGCCGGAAACGGGCTCAC 41373 | | || || ||||| ||||||||||| ||||| | ||| || | ||||| || || | Sbjct 22252 GGATAACGGCACCAGAAATAATATTGTTTCCGTAAAGTAAAGATCAAGAAACAGGTTCGC 22311 Query 41374 GTATGCCATCTATATCTACAGGCGGTGCTGCGATAAAGGCGATTATGAA-ACATGTGGTA 41432 | || ||||| |||||||| | |||| || || || || || || || ||| | || Sbjct 22312 GAATACCATCAATATCTACCGAAAGTGCAGCAATGAAAGCAATAATAAATACA-GAAGTT 22370 Query 41433 GCAGTTAGTAATGCTGGAATCATTAGCACACCAAACCAACCTACGTATAGGCGGTTGTCG 41492 || || | ||| | || ||||| | |||||||| || || | ||| || ||| || Sbjct 22371 GCGGTCAATAAAGTAGGGATCATCAAAACACCAAATCATCCAATGTAAAGATAGTT-TCA 22429 Query 41493 GTGCTAGTGACCCAGTTACAA 41513 || || || | ||| |||||| Sbjct 22430 GTTCTGGTTATCCAATTACAA 22450 >seq11001 Length=13740 Score = 259 bits (286), Expect = 1e-64 Identities = 380/535 (71%), Gaps = 6/535 (1%) Strand=Plus/Plus Query 40644 ACTACTGACTGGTTAAAGTTAAAACCATTGAGGTTAAAAGCCATAGTAGATATACCCATG 40703 ||||| || || || || ||||| ||||| | ||| ||||||||||| |||||| | Sbjct 5282 ACTACAGATTGATTGAAATTAAATCCATTTAAGTTGAAAGCCATAGTGCTTATACCTAAA 5341 Query 40704 GAGGTAAGCCATATGCCAATAACCGGGAAAGCACCAAGAAAGAAGTGTAGCGCACGGCTA 40763 | ||| | ||| || || | || || ||||| | | |||||||||| | ||| | Sbjct 5342 GCGGTGAACCAGATACCTACTACAGGCCAAGCAGCTAAGAAGAAGTGTAAAGAACGAGAA 5401 Query 40764 TTGTTGAATGAAGCATATTGAAATATTAGTCTACCAAAGTAACCGTGTGCAGCTACGATG 40823 |||||||| ||||||||| || || | || ||||| ||||| || || |||||||| Sbjct 5402 TTGTTGAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCGGCTACGATA 5461 Query 40824 TTATAAGTCTCGCCTTCCTGACCAAACTTATACCCGTAGTTCTGTGATTCAGTTTCCGTG 40883 |||||||| || | || | ||| || | || | | || |||||| |||| ||| Sbjct 5462 TTATAAGTTTCTTCCTCTTCACCGAATCTGTAACTTTCATTAGCAGATTCATTTTCTGTG 5521 Query 40884 GTCTCCCGAATGA---TTGAGGAAGTAACAAGGCTTCCGTGCATAGCAGCAAACAAAGCA 40940 || |||| ||| | | |||| || ||| | || ||||||||| || | | Sbjct 5522 GTTTCCCTAATCAAACTAGAGGT--TACCAAAGAA-CCATGCATAGCACTGAATAGGGAG 5578 Query 40941 CCACCAAAGACGCCTGCAACGCCGAGCATATGGAATGGGTGCATGAGAATGTTGTGTTCT 41000 || || || || || || || || ||||| || ||||||||||| || |||||||| || Sbjct 5579 CCGCCGAATACACCAGCCACACCTAGCATGTGAAATGGGTGCATAAGGATGTTGTGCTCA 5638 Query 41001 GCTTGGAAGACAAACATGAAGTTGAATGTTCCACTGATTCCTAAAGGCATACCATCAGAG 41060 |||||||| |||| |||||||||||| || ||| |||||||| ||||||||| ||||| Sbjct 5639 GCTTGGAATACAATCATGAAGTTGAAAGTACCAGAGATTCCTAGAGGCATACCGTCAGAA 5698 Query 41061 AAAGAACCCTGACCGAATGGATAAACTAAGAATACAGCTAGAGCTGCTGACAATGGAGCT 41120 || || ||||| | ||| || | ||||| ||||| ||| |||| | |||||| Sbjct 5699 AAGCTTCCTTGACCAATTGGGTAGATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCT 5758 Query 41121 GTGTATGCCACAAATATCCATGGTCTCATACCTAGTCTGTATGAAAGTTCCCACT 41175 | ||||| || ||||| || | |||||| || | | | ||||||||||| Sbjct 5759 GAATATGCAACCGCAATCCAAGGGCGCATACCCAGACGGAAACTAAGTTCCCACT 5813 >seq3141 Length=44585 Score = 176 bits (194), Expect = 1e-39 Identities = 278/394 (71%), Gaps = 6/394 (2%) Strand=Plus/Plus Query 41125 ATGCCACAAATATCCATGGTCTCATACCTAGTCTGTATGAAAGTTCCCACTGTCTACCAG 41184 |||| ||| ||||| || | |||||| || | | | ||||||||||| | ||| Sbjct 42618 ATGCAACAGCAATCCAAGGGCGCATACCCAGACGGAAAATAAGTTCCCACTCACGACC-- 42675 Query 41185 CGTATGCT--GCTACTCCTATTAAAAAGTGAAAGACAATGAGTTGATATGGTCCGCCGTT 41242 | ||| | ||||| || | ||| ||||| | ||||| || | ||| || || ||||| Sbjct 42676 CATATAGTAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCACCGTT 42735 Query 41243 GTATAGCCACTCGTCCAGTGTGCCGGCTTCCCAGATTGGGTAGAAATGTAGTCCGATTGC 41302 ||||| ||| || || | | | |||| ||| |||||||| || || | || || || Sbjct 42736 GTATAACCATTCATCAACGGAAGCTGCTTTCCATATTGGGTAAAAGTGCAAACCTATAGC 42795 Query 41303 GTTAGAGCTCGGAACGACAGCTCCAGATATAATATTGTTCCCGTACATTAACGAGCCGGA 41362 | | | || | | || | ||| ||||||||||| ||||| | ||| || || || Sbjct 42796 TGCAAAAGTAGGGATAATGGCACTAGAAATAATATTGTTTCCGTAAAGTAAAGATCCAGA 42855 Query 41363 AACGGGCTCACGTATGCCATCTATATCTACAGGCGGTGCTGCGATAAAGGCGATTATGAA 41422 ||| || ||||| || ||||| |||||||| || ||||| || || || || || || || Sbjct 42856 AACAGGTTCACGAATACCATCAATATCTACCGGAGGTGCAGCAATGAAAGCAATAATAAA 42915 Query 41423 -ACATGTGGTAGCAGTTAGTAATGCTGGAATCATTAGCACACCAAACCAACCTACGTATA 41481 ||| | || ||||| | ||| | || ||||| | ||||||||||| || | ||| | Sbjct 42916 TACA-GATGTTGCAGTCAATAAAGTAGGGATCATCAAAACACCAAACCATCCAATGTAAA 42974 Query 41482 GGCGGTTGTCGGTGCTAGTGACCCAGTTACAAAA 41515 | ||||| || ||||| || | ||| |||||||| Sbjct 42975 GACGGTTTTCAGTGCTGGTTATCCAATTACAAAA 43008 >seq63634 Length=978 Score = 150 bits (166), Expect = 5e-32 Identities = 275/395 (70%), Gaps = 7/395 (2%) Strand=Plus/Minus Query 41125 ATGCCACAAATATCCATGGTCTCATACCTAGTCTGTATGAAAGTTCCCACTGTCTACCAG 41184 |||| ||| ||||| || | |||||| || | | | ||||||||||| | ||| Sbjct 606 ATGCAACAGCAATCCAAGGGCGCATACCCAGACGGAAATTAAGTTCCCACTCACGACC-- 549 Query 41185 CGTAT-GCT-GCTACTCCTATTAAAAAGTGAAAGACAATGAGTTGATATGGTCCGCCGTT 41242 | ||| || ||| | || | ||| ||||| | ||||| || | | | || || ||||| Sbjct 548 CATATAGCAAGCTGCACCAAGTAAGAAGTGTAGAACAATTAGCTCACAAGGACCACCGTT 489 Query 41243 GTATAGCCACTCGTCCAGTGTGCCGGCTTCCCAGATTGGGTAGAAATGTAGTCCGATTGC 41302 ||||| || || || | | | |||||||| |||||||| || || | || || || Sbjct 488 GTATAATCATTCATCGACGGAAGCCGCTTCCCATATTGGGTAAAAGTGCAAACCTATAGC 429 Query 41303 GTTAGAGCTCGGAACGACAGCTCCAGATATAATATT-GTTCCCGTACATTAACGAGCCGG 41361 ||| | || | | || ||||| |||||||| ||| || || | ||| || || | Sbjct 428 TGCAGAAGTAGGGATAATGGCACCAGAAATAATATTTGTTTCCCTAAAGTAAAGATCCAG 369 Query 41362 AAACGGGCTCACGTATGCCATCTATATCTACAGGCGGTGCTGCGATAAAGGCGATTATGA 41421 |||| || ||||| || ||||| |||| ||| || ||||| || || || || || || | Sbjct 368 AAACAGGTTCACGAATACCATCAATATGTACCGGAGGTGCAGCAATGAAAGCAATAATAA 309 Query 41422 A-ACATGTGGTAGCAGTTAGTAATGCTGGAATCATTAGCACACCAAACCAACCTACGTAT 41480 | ||| | | || || | ||| | || ||||| | ||||||||||| || | ||| Sbjct 308 ATACA-GAAATTGCGGTCAATAAAGTAGGGATCATCAAAACACCAAACCATCCAATGTAA 250 Query 41481 AGGCGGTTGTCGGTGCTAGTGACCCAGTTACAAAA 41515 || ||||| || ||||| || | ||| |||||||| Sbjct 249 AGACGGTTTTCAGTGCTGGTTATCCAATTACAAAA 215 >seq902 Length=93126 Score = 150 bits (166), Expect = 5e-32 Identities = 176/235 (75%), Gaps = 6/235 (3%) Strand=Plus/Plus Query 40941 CCACCAAAGACGCCTGCAACGCCGAGCATATGGAATGGGTGCATGAGAATGTTGTGTTCT 41000 || || || || || || || || ||||| || ||||||||||| || |||||||| || Sbjct 1250 CCGCCGAATACACCAGCCACACCTAGCATGTGAAATGGGTGCATAAGGATGTTGTGCTCA 1309 Query 41001 GCTTGGAAGACAAACATGAAGTTGAATGTTCCACTGATTCCTAAAGGCATACCATCAGAG 41060 |||||||| |||| |||||||||||| || ||| |||||||| ||||||| | ||||| Sbjct 1310 GCTTGGAATACAATCATGAAGTTGAAAGTACCAAAGATTCCTAGAGGCATATCGTCAGAA 1369 Query 41061 AAAGAACCCTGACCGAATGGATAAACTAAGAATACAGCTAGAGCTGCTGACAATGGAGCT 41120 || || ||||| | ||| || | ||||| ||||| |||||| ||| |||||| Sbjct 1370 AAGCTTCCTTGACCAATTGGGTAGATCAAGAAAACAGC---AGCTGC-AACA--GGAGCT 1423 Query 41121 GTGTATGCCACAAATATCCATGGTCTCATACCTAGTCTGTATGAAAGTTCCCACT 41175 | ||||| ||| ||||| || | |||||| || | | | ||||||||||| Sbjct 1424 GAATATGCAACAGCAATCCAAGGGCGCATACCCAGACGGAAACTAAGTTCCCACT 1478 >seq11993 Length=12302 Score = 143 bits (158), Expect = 8e-30 Identities = 230/330 (70%), Gaps = 4/330 (1%) Strand=Plus/Minus Query 40524 TCAGCAGAAGCTAAGTCTAGAGGAAAGTTGTGAGCGTTACGCTCGTGCATTACTTCCATA 40583 ||| ||| ||||| ||||||||| || || ||||| ||||| || |||| ||||||||| Sbjct 10713 TCAACAGCAGCTAGGTCTAGAGGGAAATTATGAGCATTACGTTCATGCAGAACTTCCATA 10654 Query 40584 CCTAGACTCTGTCTGTTAAGAACATCAGCCCAAGTAGGAATGACTT----TACCATTAGC 40639 || || | | ||||| || ||||| ||||||| ||| | || ||| | | Sbjct 10653 CCAAGGTTAGCGCGGTTAATAATATCAGACCAAGTATTAATTAATTACACAACCTTGACT 10594 Query 40640 GTCTACTACTGACTGGTTAAAGTTAAAACCATTGAGGTTAAAAGCCATAGTAGATATACC 40699 || ||||| || || || | ||||| ||||| | ||| |||| |||||| ||||| Sbjct 10593 ATCAACTACAGATTGATTGACATTAAATCCATTTAAGTTGAAAGTCATAGTGCTGATACC 10534 Query 40700 CATGGAGGTAAGCCATATGCCAATAACCGGGAAAGCACCAAGAAAGAAGTGTAGCGCACG 40759 | | ||| | | | || || | || || ||||| | | |||||||||| | | | Sbjct 10533 TAAAGTGGTGAACTAGATACCTACTACAGGCCAAGCAGCTAAGAAGAAGTGTAAAGAATG 10474 Query 40760 GCTATTGTTGAATGAAGCATATTGAAATATTAGTCTACCAAAGTAACCGTGTGCAGCTAC 40819 ||||||||| ||||||||| || || | || ||||| ||||| || | ||||| Sbjct 10473 AGAATTGTTGAAACTAGCATATTGGAAGATCAATCAGCCAAAATAACCATGAGTGGCTAC 10414 Query 40820 GATGTTATAAGTCTCGCCTTCCTGACCAAA 40849 || |||||||| || | || ||||| || Sbjct 10413 AATATTATAAGTTTCTTCCTCTTGACCGAA 10384 >seq2785 Length=48819 Score = 141 bits (156), Expect = 3e-29 Identities = 227/326 (70%), Gaps = 4/326 (1%) Strand=Plus/Plus Query 40524 TCAGCAGAAGCTAAGTCTAGAGGAAAGTTGTGAGCGTTACGCTCGTGCATTACTTCCATA 40583 ||| ||| ||||| || |||||| || || ||||| ||||| || |||| ||||||||| Sbjct 2457 TCAACAGCAGCTAGGTTTAGAGGGAAATTATGAGCATTACGTTCATGCAGAACTTCCATA 2516 Query 40584 CCTAGACTCTGTCTGTTAAGAACATCAGCCCAAGTAGGAATGACTT----TACCATTAGC 40639 || || | | ||||| || ||||| ||||||| ||| | || ||| | | Sbjct 2517 CCAAGGTTAGCGCGGTTAATAATATCAGACCAAGTATTAATTAATTACACAACCTTAACT 2576 Query 40640 GTCTACTACTGACTGGTTAAAGTTAAAACCATTGAGGTTAAAAGCCATAGTAGATATACC 40699 || ||||| || || || | ||||| ||||| | ||| |||| |||||| ||||| Sbjct 2577 ATCAACTACAGATTGATTGACATTAAATCCATTTAAGTTGAAAGTCATAGTGCTGATACC 2636 Query 40700 CATGGAGGTAAGCCATATGCCAATAACCGGGAAAGCACCAAGAAAGAAGTGTAGCGCACG 40759 | | ||| | | | || || | || || ||||| | | |||||||||| | | | Sbjct 2637 TAAAGCGGTGAACTAGATACCTACTACAGGCCAAGCAGCTAAGAAGAAGTGTAAAGAATG 2696 Query 40760 GCTATTGTTGAATGAAGCATATTGAAATATTAGTCTACCAAAGTAACCGTGTGCAGCTAC 40819 ||||||||| ||||||||| || || | || ||||| ||||| || || ||||| Sbjct 2697 AGAATTGTTGAAACTAGCATATTGGAAGATCAATCAGCCAAAATAACCATGAGCGGCTAC 2756 Query 40820 GATGTTATAAGTCTCGCCTTCCTGAC 40845 || |||||||| || | || |||| Sbjct 2757 AATATTATAAGTTTCTTCCTCTTGAC 2782 >seq3447 Length=41424 Score = 138 bits (152), Expect = 3e-28 Identities = 205/285 (72%), Gaps = 8/285 (3%) Strand=Plus/Minus Query 40870 ATTCAGTTTCCGTGGTCTCCCGAATGA---TTGAGGAAGTAACAAGGCTTCCGTGCATAG 40926 ||||| |||| ||||| |||| || | | |||| || ||| | || ||||||| Sbjct 13579 ATTCATTTTCTGTGGTTTCCCTGATCAAACTAGAGGT--TACCAAAGAA-CCATGCATAG 13523 Query 40927 CAGCAAACAAAGCACCACCAAAGACGCCTGCAACGCCGAGCATATGGAATGGGTGCATGA 40986 || || | | || || || || || || || || ||||| || ||||||||||| | Sbjct 13522 CACTGAATAGGGAGCCGCCGAATACACCAGCCACACCTAGCATGTGAAATGGGTGCATAA 13463 Query 40987 GAATGTTGTGTTCTGCTTGGAAGACAAACATGAAGTTGAATGTTCCACTGATTCCTAAAG 41046 | |||||||| || |||||||| |||| |||||||||||| || ||| |||||||| || Sbjct 13462 GGATGTTGTGCTCAGCTTGGAATACAATCATGAAGTTGAAAGTACCAGAGATTCCTAGAG 13403 Query 41047 GCATACCATCAGAGAAAGAACCCTGACCGAATGGATAAACTAAGAATACAGCTAGAGCTG 41106 ||||||| ||||| || || ||||| | ||| || | ||||| | | | || | Sbjct 13402 GCATACCGTCAGAAAAGCTTCCTTGACCAATTGGGTAGATCAAGAAAATAACAGTAGTAG 13343 Query 41107 CTGACAAT-GGAGCTGTGTATGCCACAAATATCCATGGTCTCATA 41150 ||| |||| ||||||| ||||| ||| ||||| || | |||| Sbjct 13342 CTG-CAATAGGAGCTGAATATGCAACAGCAATCCAAGGGCACATA 13299 >seq31866 Length=2350 Score = 105 bits (116), Expect = 2e-18 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 41209 AGTGAAAGACAATGAGTTGATATGGTCCGCCGTTGTATAGCCACTCGTCCAGTGTGCCGG 41268 |||| | ||||| || | ||| || || |||||||||| ||| || || | | | | Sbjct 1999 AGTGTAGAACAATTAGCTCATAAGGACCACCGTTGTATAACCATTCATCAACGGAAGCCG 1940 Query 41269 CTTCCCAGATTGGGTAGAAATGTAGTCCGATTGCGTTAGAGCTCGGAACGACAGCTCCAG 41328 ||||||| |||||||| || || | || || || ||| | || | | || |||| Sbjct 1939 CTTCCCATATTGGGTAAAAGTGCAAACCTATAGCTGCAGAAGTAGGGATAATGGCACCAG 1880 Query 41329 ATATAATATTGTTCCCGTACATTAACGAGCCGGAAACGGGCTCACGTATGCCATCTATAT 41388 | ||||||||||| ||||| | ||| || || ||||| || ||||| || ||||| |||| Sbjct 1879 AAATAATATTGTTTCCGTAAAGTAAAGATCCAGAAACAGGTTCACGAATACCATCAATAT 1820 Query 41389 CTACAGGCGGT 41399 |||| || ||| Sbjct 1819 CTACCGGAGGT 1809 >seq136643 Length=350 Score = 100 bits (110), Expect = 8e-17 Identities = 127/172 (74%), Gaps = 6/172 (3%) Strand=Plus/Plus Query 40524 TCAGCAGAAGCTAAGTCTAGAGGAAAGTTGTGAGCGTTACGCTCGTGCATTACTTCCATA 40583 ||| ||| ||||| ||||||||| || || ||||| ||||| || |||| ||||||||| Sbjct 132 TCAACAGTAGCTAGGTCTAGAGGGAAATTATGAGCATTACGTTCTTGCAGAACTTCCATA 191 Query 40584 CCTAGACTCTG-TCTGTTAAGAACATCAGCCCAAGTAGGAATGACTT----TACCATTAG 40638 || || || | | ||||| || ||||||||||||| ||| | || ||| | | Sbjct 192 CCAAG-GTCAGCGCAGTTAATAATATCAGCCCAAGTATTAATTAATTACACGACCTTGAC 250 Query 40639 CGTCTACTACTGACTGGTTAAAGTTAAAACCATTGAGGTTAAAAGCCATAGT 40690 || ||||| || || | || ||||| ||||| | ||| ||||||||||| Sbjct 251 TATCAACTACAGATTGACTGAAATTAAATCCATTTAAGTTGAAAGCCATAGT 302 >seq105467 Length=471 Score = 95.1 bits (104), Expect = 3e-15 Identities = 161/233 (69%), Gaps = 4/233 (2%) Strand=Plus/Minus Query 40524 TCAGCAGAAGCTAAGTCTAGAGGAAAGTTGTGAGCGTTACGCTCGTGCATTACTTCCATA 40583 ||| ||| ||||| || |||||| || || ||||| ||||| || |||| ||||||||| Sbjct 240 TCAACAGCAGCTAGGTTTAGAGGGAAATTATGAGCATTACGTTCATGCAGAACTTCCATA 181 Query 40584 CCTAGACTCTGTCTGTTAAGAACATCAGCCCAAGTAGGAATGACTT----TACCATTAGC 40639 || || | | ||||| || ||||| ||||||| ||| | || ||| | | Sbjct 180 CCAAGGTTAGCGCGGTTAATAATATCAGACCAAGTATTAATTAATTACACAACCTTAACT 121 Query 40640 GTCTACTACTGACTGGTTAAAGTTAAAACCATTGAGGTTAAAAGCCATAGTAGATATACC 40699 || ||||| || || || | ||||| ||||| | ||| |||| |||||| ||||| Sbjct 120 ATCAACTACAGATTGATTGACATTAAATCCATTTAAGTTGAAAGTCATAGTGCTGATACC 61 Query 40700 CATGGAGGTAAGCCATATGCCAATAACCGGGAAAGCACCAAGAAAGAAGTGTA 40752 | | ||| | | | || || | || || ||||| | | |||||||||| Sbjct 60 TAAAGCGGTGAACTAGATACCTACTACAGGCCAAGCAGCTAAGAAGAAGTGTA 8 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143177026899648