Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rosa_20x_20damascena_20[genbank_20GCA_5F001662545.1_202016-06-13] 307,872 sequences; 711,719,955 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq398 109 1e-18 >seq398 Length=130292 Score = 109 bits (120), Expect = 1e-18 Identities = 132/180 (73%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 305309 CATTTGAATGACAATGATTGGGTTCTGTTCAATAGGCAACCATCACTGCATAAAATGTCT 305368 ||||||||||| || | || || || ||| | ||||| || ||||||||||| Sbjct 30744 CATTTGAATGATGGAGACTTTGTCCTCTTTAATCGTCAACCCAGTCTCCATAAAATGTCA 30803 Query 305369 ATGATGGCTCATAAAGTCAAAGTATTATCTGGATTGACATTTCGATTAAATGTAAGTGCT 305428 || |||| || | | ||||| | | || | || |||||||||||| || || Sbjct 30804 ATTATGGGGCACAGAATCAAAATCATGCCTTACTCAACTTTTCGATTAAATCTATCTGTC 30863 Query 305429 TGTACGCCTTATAATGCGGATTTTGATGGAGATGAAATGAATATGCATGTACCTCAATCA 305488 | ||||||||||||| ||||||||||| |||||||||||||||||||| || || ||| Sbjct 30864 ACTTCGCCTTATAATGCTGATTTTGATGGGGATGAAATGAATATGCATGTTCCCCAGTCA 30923 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1182131286360992