Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rosa_20x_20damascena_20[genbank_20GCA_5F001662545.1_202016-06-13]
307,872 sequences; 711,719,955 total letters
Query= NC_026923.1
Length=179110
Score E
Sequences producing significant alignments: (Bits) Value
seq5638 378 8e-100
seq251 378 8e-100
seq11001 361 6e-95
seq902 208 9e-49
seq11993 194 2e-44
seq2785 190 2e-43
seq3447 183 3e-41
seq3141 181 1e-40
seq63634 161 1e-34
seq105467 125 8e-24
seq136643 118 1e-21
seq7201 109 6e-19
seq31866 98.7 1e-15
seq12847 96.9 4e-15
>seq5638
Length=27578
Score = 378 bits (418), Expect = 8e-100
Identities = 619/878 (71%), Gaps = 22/878 (3%)
Strand=Plus/Minus
Query 157716 TTGGTTGGTTCGGTGTACTGATGATTCCTACGTTGCTTGCTGCAACTATCTGT-TTCATC 157774
|||| || || ||||| ||||||| ||||| || | | |||||| ||||| || ||
Sbjct 22413 TTGGATGATTTGGTGTTTTGATGATCCCTACTTTATTGACCGCAACT-TCTGTATTTATT 22355
Query 157775 GTCGCCTTCGTCGCTGCTCCCCCTGTGGACATTGACGGCATCCGCGAACCAGTTGCTGGT 157834
| || ||| | ||||| | | || || ||||| || || |||||||| ||| || |
Sbjct 22354 ATTGCTTTCATTGCTGCACTTTCGGTAGATATTGATGGTATTCGCGAACCTGTTTCTTGA 22295
Query 157835 TCACTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCTAGTTCAAACGCA--- 157891
|| | | || || ||||| || || |||||||| ||| | |||| ||| |||
Sbjct 22294 TCTTTACTTTACGGAAACAATATTATTTCTGGTGCCGTTATCCCTACTTCT---GCATAT 22238
Query 157892 ATCGGTCTCCACTTCTACCCCATCTGGGAAGCAGCATCTCTTGACGAGTGGCTGTATAAC 157951
|| ||| | ||||| ||||| || ||||||| || || |||| || | | || ||
Sbjct 22237 ATAGGTTTGCACTTTTACCCAATATGGGAAGTGGCTTCCGTTGATGAATAATTATACAAT 22178
Query 157952 GGTGGTCCTTTCCAACTTGTAGTATTCCACTTCCTGATCG--GCATCTATGCCTATATGG 158009
|||||||||| | || | || | |||||| | | | | | || ||| |||||||
Sbjct 22177 GGTGGTCCTTATGAGCTAATTGTTCTACACTTCATACTTGTTGTAGCT-TGC-TATATGG 22120
Query 158010 GACGTGAGTGGGAACTCTCTTACCGTTTAGGTATGCGCCCATGGATCTGTGTAGCATATT 158069
| ||||||||| |||| || ||| | || |||||| ||||| ||| |||||||
Sbjct 22119 GTCGTGAGTGGAAACTTAGTTTTCGTCTGGG---GCGCCCTTGGATTGTTGTTGCATATT 22063
Query 158070 CTGCTCCAGTCGCTGCAGCGAGTGCAGTATTCCTAGTCTATCCTTTCGGTCAAGGTTCTT 158129
| ||||| || || || | | ||| || ||| | |||| || | |||||||| |
Sbjct 22062 CAGCTCCTGTTGCAGCTGTTACTGCTGTTTTCTTGATCTACCCAATTGGTCAAGGAAGCT 22003
Query 158130 TCTCCGATGCTATGCCTCTTGGTATCTCTGGTACTTTTAACTACATGCTTGTATTCCAAG 158189
| || || | |||||| | || |||||||||||||| |||| |||| ||||||||||||
Sbjct 22002 TTTCTGACGGTATGCCGCGAGGAATCTCTGGTACTTTCAACTTCATGATTGTATTCCAAG 21943
Query 158190 CAGAACACAACATCCTTATGCACCCGTTCCATATGCTCGGTGTTGCTGGGGTATTCGGTG 158249
| || |||||||||||||||||||| || || ||||| ||||| | ||| ||||||| |
Sbjct 21942 CTGAGCACAACATCCTTATGCACCCATTTCACATGCTAGGTGTGGTTGGTGTATTCGACG 21883
Query 158250 GATCTCTTTTCTCTGCTATGCATGGAAGTCTCGTTACTTCCTCACTCGTTC-GTGAAACG 158308
| || || ||| ||||||||| || | | | || | || | | || | |||||
Sbjct 21882 GCTCCCTATTCAGTGCTATGCAAGGTTCT-TTGGTAATCTCTAGTTTGATCAGGGAAACC 21824
Query 158309 ACTGAAACAGAGTCACAGAACTACGGTTATAAGTTCGGTCAAGAAGAAGAGACCTACAAC 158368
|| |||| | | || | ||||| | |||| |||||| ||||| || || ||
Sbjct 21823 ACAGAAAATGTATTTGCTAATGAAGGTTACAGATTCGATCAAGAGGAAGAAACTTATAAT 21764
Query 158369 ATCGTTGCAGCCCATGGCTACTTCGGTCGTTTGATCTTCCAATACGCTTCATTCAACAAC 158428
||||| ||| ||||| || || || || |||||||||||||| ||| ||||||||
Sbjct 21763 ATCGTACTAGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAAT 21704
Query 158429 TCCCGTTCCTTGCACTTCTTCCTTGCTGCATGGCCTGTTGTCGGCATCTGGTTCACCGCC 158488
|| ||||| || ||||||||| | ||||| |||||||| || || |||| ||||||||
Sbjct 21703 TCTCGTTCTTTACACTTCTTCTTAGCTGCTTGGCCTGTAGTAGGTATCTAGTTCACCG-- 21646
Query 158489 CTTGGCGTGTCA--ACCATGGCATTCAACCTGAACGGTTTCAACTTCAACCAGTCCATCC 158546
||| || | | || ||| | |||||| | || || || || ||||| || | |
Sbjct 21645 CTTTAAGTATTAGCACTATGACTTTCAACTTAAATGGATTTAATTTCAATCAAGCTGTAT 21586
Query 158547 TTGATGGTCAGGGTCGTGTGTTGAACACCTGGGCAGAT 158584
|||| |||| ||||||| | || || ||||| |||
Sbjct 21585 TTGAGAGTCA-AGTCGTGTAATTAATACTTGGGCTGAT 21549
>seq251
Length=151924
Score = 378 bits (418), Expect = 8e-100
Identities = 436/584 (75%), Gaps = 6/584 (1%)
Strand=Plus/Minus
Query 159811 ATCTATCCACTGGGTCAGTCTTCATGGTTCTTTGCACCTAGTTTCGGGGTAGCAGCAATC 159870
|| ||||| | |||||||| ||||||||||| || | ||| || |||||||| ||
Sbjct 52481 ATTTATCCGGTAGGTCAGTCAGGTTGGTTCTTTGCGCCCAATTTTGGTGTAGCAGCTATA 52422
Query 159871 TTTAGATTC---CTGTTGTTCCTTCAGGGTTTCCACAACTGGACCCTCAACCCCTTCCAT 159927
||| ||||| || || |||| |||||||| | || ||||| | ||||| || |||
Sbjct 52421 TTTCGATTCATCCTCTTTTTCCA--AGGGTTTC-ATAATTGGACATTGAACCCATTTCAT 52365
Query 159928 ATGATGGGAGTTGCTGGTATACTAGGTGGAGCACTGTTGTGTGCAATCCATGGTGCTACT 159987
|||||||||||||| || | | || | | ||||| || | || |||||||||||
Sbjct 52364 ATGATGGGAGTTGCGGGGGTGTTGGGCGCTTCTCTGTTATGCGTTATTCATGGTGCTACC 52305
Query 159988 GTAGAGAACACATTGTTTGAAGATGGAGAACAAGCAAACACATTTAAGGCGTTTGAGCCT 160047
||||| || || || ||||||||||| || ||||| ||||| || ||| | ||
Sbjct 52304 GTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGCTTTTAACCCA 52245
Query 160048 ACTCAAGAAGAAGAGACTTATTCTATGGTCACTGCAAACCGCTTCTGGTCGCAGATCTTC 160107
||||||| ||||| |||||||| |||||||| || |||||||| ||||| || |||||
Sbjct 52244 ACTCAAGCTGAAGAAACTTATTCCATGGTCACCGCTAACCGCTTTTGGTCCCAAATCTTT 52185
Query 160108 GGTGTTGCATTTTCTAACAAGCGGTGGCTTCATTTTTTCATGTTGTTTGTGCCTGTTATG 160167
|| ||||| ||||| || || || ||| | ||||| || ||||| ||||| || || |
Sbjct 52184 GGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACC 52125
Query 160168 GGTCTATGGACATCCTCTATTGGCATTATTGGTCTTGCTTTCAACCTTCGTGCTTACGAT 160227
||| |||||| || |||| | | ||||| || | ||||| ||||| || ||
Sbjct 52124 GGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTGGCCCTGAACCTACGTGCCTATGAC 52065
Query 160228 TTCGTGAGTCAGGAGATTAGAGCAGCAGAAGATCCTGAATTTGAGACCTTCTACACCAAG 160287
||||| |||||| || | ||||| |||||||||||||||||||| |||||||||||
Sbjct 52064 TTCGTTTCTCAGGAAATCTGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACCAAA 52005
Query 160288 AACATCCTATTGAATGAAGGACTTCGTGCTTGGATGGCACCTGCTGATCAACCACATGAA 160347
|| || || || || ||||| ||||||||||||||| || ||||| || ||||||
Sbjct 52004 AATATTCTCTTAAACGAAGGTATTCGTGCTTGGATGGGGGCTCAAGATCAGCCTCATGAA 51945
Query 160348 AACTTTATCTTCCCTGAGGAAGTACTACCTAGAGGTAACGCACT 160391
||| |||| ||||||||||| || ||||| | || ||||| ||
Sbjct 51944 AACCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCT 51901
>seq11001
Length=13740
Score = 361 bits (400), Expect = 6e-95
Identities = 404/540 (75%), Gaps = 0/540 (0%)
Strand=Plus/Minus
Query 158002 CTATATGGGACGTGAGTGGGAACTCTCTTACCGTTTAGGTATGCGCCCATGGATCTGTGT 158061
||||||||| ||||||||||||| || |||| | ||||||||||| ||||| ||
Sbjct 5827 CTATATGGGTTGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGATTGCGGT 5768
Query 158062 AGCATATTCTGCTCCAGTCGCTGCAGCGAGTGCAGTATTCCTAGTCTATCCTTTCGGTCA 158121
|||||||| ||||| || || || || | ||| || ||| | |||| || | |||||
Sbjct 5767 TGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATCTACCCAATTGGTCA 5708
Query 158122 AGGTTCTTTCTCCGATGCTATGCCTCTTGGTATCTCTGGTACTTTTAACTACATGCTTGT 158181
||| || || || | ||||||||| || |||||||||||||| |||| |||| ||||
Sbjct 5707 AGGAAGCTTTTCTGACGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATGATTGT 5648
Query 158182 ATTCCAAGCAGAACACAACATCCTTATGCACCCGTTCCATATGCTCGGTGTTGCTGGGGT 158241
||||||||| || |||||||||||||||||||| || || ||||| ||||| ||||| ||
Sbjct 5647 ATTCCAAGCTGAGCACAACATCCTTATGCACCCATTTCACATGCTAGGTGTGGCTGGTGT 5588
Query 158242 ATTCGGTGGATCTCTTTTCTCTGCTATGCATGGAAGTCTCGTTACTTCCTCACTCGTTCG 158301
|||||| || || || ||| |||||||||||| | | || || || | || |
Sbjct 5587 ATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCTTTGGTAACCTCTAGTTTGATTAG 5528
Query 158302 TGAAACGACTGAAACAGAGTCACAGAACTACGGTTATAAGTTCGGTCAAGAAGAAGAGAC 158361
||||| || |||| || || || | |||| | |||||| |||| ||||| ||
Sbjct 5527 GGAAACCACAGAAAATGAATCTGCTAATGAAAGTTACAGATTCGGTGAAGAGGAAGAAAC 5468
Query 158362 CTACAACATCGTTGCAGCCCATGGCTACTTCGGTCGTTTGATCTTCCAATACGCTTCATT 158421
|| || ||||| || || ||||| || || || || |||||||||||||| ||| ||
Sbjct 5467 TTATAATATCGTAGCCGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTT 5408
Query 158422 CAACAACTCCCGTTCCTTGCACTTCTTCCTTGCTGCATGGCCTGTTGTCGGCATCTGGTT 158481
|||||| || ||||| || ||||||||| | ||||| |||||||| || || ||||||||
Sbjct 5407 CAACAATTCTCGTTCTTTACACTTCTTCTTAGCTGCTTGGCCTGTAGTAGGTATCTGGTT 5348
Query 158482 CACCGCCCTTGGCGTGTCAACCATGGCATTCAACCTGAACGGTTTCAACTTCAACCAGTC 158541
|||||| | || | || ||||| |||||| | || || || || ||||| || ||
Sbjct 5347 CACCGCTTTAGGTATAAGCACTATGGCTTTCAACTTAAATGGATTTAATTTCAATCAATC 5288
>seq902
Length=93126
Score = 208 bits (230), Expect = 9e-49
Identities = 198/252 (79%), Gaps = 6/252 (2%)
Strand=Plus/Minus
Query 158002 CTATATGGGACGTGAGTGGGAACTCTCTTACCGTTTAGGTATGCGCCCATGGATCTGTGT 158061
||| ||||| |||||||||||||| || |||| | ||||||||||| ||||| |||
Sbjct 1492 CTACATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGATTGCTGT 1433
Query 158062 AGCATATTCTGCTCCAGTCGCTGCAGCGAGTGCAGTATTCCTAGTCTATCCTTTCGGTCA 158121
|||||||| ||||| || |||||| ||| || ||| | |||| || | |||||
Sbjct 1432 TGCATATTCAGCTCCTGT---TGCAGC---TGCTGTTTTCTTGATCTACCCAATTGGTCA 1379
Query 158122 AGGTTCTTTCTCCGATGCTATGCCTCTTGGTATCTCTGGTACTTTTAACTACATGCTTGT 158181
||| || || || | ||||||||| || |||| ||||||||| |||| |||| ||||
Sbjct 1378 AGGAAGCTTTTCTGACGATATGCCTCTAGGAATCTTTGGTACTTTCAACTTCATGATTGT 1319
Query 158182 ATTCCAAGCAGAACACAACATCCTTATGCACCCGTTCCATATGCTCGGTGTTGCTGGGGT 158241
||||||||| || |||||||||||||||||||| || || ||||| ||||| ||||| ||
Sbjct 1318 ATTCCAAGCTGAGCACAACATCCTTATGCACCCATTTCACATGCTAGGTGTGGCTGGTGT 1259
Query 158242 ATTCGGTGGATC 158253
|||||| || ||
Sbjct 1258 ATTCGGCGGCTC 1247
>seq11993
Length=12302
Score = 194 bits (214), Expect = 2e-44
Identities = 249/341 (73%), Gaps = 8/341 (2%)
Strand=Plus/Plus
Query 158333 GGTTATAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCAGCCCATGGCTACTTC 158392
||||| | ||||||||||| ||||| || || || || || || | ||||| || ||
Sbjct 10375 GGTTACAGATTCGGTCAAGAGGAAGAAACTTATAATATTGTAGCCACTCATGGTTATTTT 10434
Query 158393 GGTCGTTTGATCTTCCAATACGCTTCATTCAACAACTCCCGTTCCTTGCACTTCTTCCTT 158452
|| | |||||||||||||| ||| |||||||| || | ||| || ||||||||| |
Sbjct 10435 GGCTGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCATTCTTTACACTTCTTCTTA 10494
Query 158453 GCTGCATGGCCTGTTGTCGGCATCTGGTTCACCGCCCTTGGCGTGTCA--ACCATGGCAT 158510
||||| |||||||| || || |||| |||||| | ||| || ||| || ||| | |
Sbjct 10495 GCTGCTTGGCCTGTAGTAGGTATCTAGTTCAC--CACTTTAGGTATCAGCACTATGACTT 10552
Query 158511 TCAACCTGAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTG----TG 158566
||||| | || || || || |||| || || | ||||| |||| ||| ||| |
Sbjct 10553 TCAACTTAAATGGATTTAATGTCAATCAATCTGTAGTTGATAGTCAAGGTTGTGTAATTA 10612
Query 158567 TTGAACACCTGGGCAGATGTACTGAACCGCGCTGGTCTTGGTATGGAAGTTATGCATGAG 158626
| || || ||| | ||| | | ||||||||| ||||||||||||||| |||||||
Sbjct 10613 ATTAATACTTGGTCTGATATTATTAACCGCGCTAACCTTGGTATGGAAGTTCTGCATGAA 10672
Query 158627 CGTAACGCACACAACTTCCCACTGGATCTTGCTGCTGCTGA 158667
||||| || || || ||||| || || || ||||||| |||
Sbjct 10673 CGTAATGCTCATAATTTCCCTCTAGACCTAGCTGCTGTTGA 10713
>seq2785
Length=48819
Score = 190 bits (210), Expect = 2e-43
Identities = 248/341 (73%), Gaps = 8/341 (2%)
Strand=Plus/Minus
Query 158333 GGTTATAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCAGCCCATGGCTACTTC 158392
||||| | ||| ||||||| ||||| || || || || || || || ||||| || ||
Sbjct 2795 GGTTACAGATTCAGTCAAGAGGAAGAAACTTATAATATTGTAGCCGCTCATGGTTATTTT 2736
Query 158393 GGTCGTTTGATCTTCCAATACGCTTCATTCAACAACTCCCGTTCCTTGCACTTCTTCCTT 158452
|| | |||||||||||||| ||| |||||||| || | ||| || ||||||||| |
Sbjct 2735 GGCTGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCATTCTTTACACTTCTTCTTA 2676
Query 158453 GCTGCATGGCCTGTTGTCGGCATCTGGTTCACCGCCCTTGGCGTGTCA--ACCATGGCAT 158510
||||| |||||||| || || |||| |||||||| ||| || ||| || ||| | |
Sbjct 2675 GCTGCTTGGCCTGTAGTAGGTATCTAGTTCACCG--CTTTAGGTATCAGCACTATGACTT 2618
Query 158511 TCAACCTGAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTG----TG 158566
||||| | || || || || |||| || || | ||||| || | ||| ||| |
Sbjct 2617 TCAACTTAAATGGATTTAATGTCAATCAATCTGTAGTTGATAGTTAAGGTTGTGTAATTA 2558
Query 158567 TTGAACACCTGGGCAGATGTACTGAACCGCGCTGGTCTTGGTATGGAAGTTATGCATGAG 158626
| || || ||| | ||| | | ||||||||| ||||||||||||||| |||||||
Sbjct 2557 ATTAATACTTGGTCTGATATTATTAACCGCGCTAACCTTGGTATGGAAGTTCTGCATGAA 2498
Query 158627 CGTAACGCACACAACTTCCCACTGGATCTTGCTGCTGCTGA 158667
||||| || || || ||||| || | || ||||||| |||
Sbjct 2497 CGTAATGCTCATAATTTCCCTCTAAACCTAGCTGCTGTTGA 2457
>seq3447
Length=41424
Score = 183 bits (202), Expect = 3e-41
Identities = 181/234 (77%), Gaps = 0/234 (0%)
Strand=Plus/Plus
Query 158041 TATGCGCCCATGGATCTGTGTAGCATATTCTGCTCCAGTCGCTGCAGCGAGTGCAGTATT 158100
|||| |||| ||||| ||| |||||||| ||||| | || || | | || | ||
Sbjct 13299 TATGTGCCCTTGGATTGCTGTTGCATATTCAGCTCCTATTGCAGCTACTACTGTTATTTT 13358
Query 158101 CCTAGTCTATCCTTTCGGTCAAGGTTCTTTCTCCGATGCTATGCCTCTTGGTATCTCTGG 158160
| | |||| || | |||||||| || || || | ||||||||| || ||||||||
Sbjct 13359 CTTGATCTACCCAATTGGTCAAGGAAGCTTTTCTGACGGTATGCCTCTAGGAATCTCTGG 13418
Query 158161 TACTTTTAACTACATGCTTGTATTCCAAGCAGAACACAACATCCTTATGCACCCGTTCCA 158220
|||||| |||| |||| ||||||||||||| || |||||||||||||||||||| || ||
Sbjct 13419 TACTTTCAACTTCATGATTGTATTCCAAGCTGAGCACAACATCCTTATGCACCCATTTCA 13478
Query 158221 TATGCTCGGTGTTGCTGGGGTATTCGGTGGATCTCTTTTCTCTGCTATGCATGG 158274
||||| ||||| ||||| |||||||| || || || ||| ||||||||||||
Sbjct 13479 CATGCTAGGTGTGGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGG 13532
>seq3141
Length=44585
Score = 181 bits (200), Expect = 1e-40
Identities = 278/394 (71%), Gaps = 2/394 (1%)
Strand=Plus/Minus
Query 157674 ACTTCTGCGAGTGGGTAACCTCAACCAACAACCGTTTGTATGTTGGTTGGTTCGGTGTAC 157733
|||| || | ||| ||||| || | |||||| | || |||| ||||| |||||
Sbjct 43010 ACTTTTGTAATTGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTT 42951
Query 157734 TGATGATTCCTACGTTGCTTGCTGCAACTATCTGT-TTCATCGTCGCCTTCGTCGCTGCT 157792
||||||| ||||| || | ||||||| |||||| || || | || ||| | |||||
Sbjct 42950 TGATGATCCCTACTTTATTGACTGCAAC-ATCTGTATTTATTATTGCTTTCATTGCTGCA 42892
Query 157793 CCCCCTGTGGACATTGACGGCATCCGCGAACCAGTTGCTGGTTCACTCATGTATGGTAAC 157852
|| || || || ||||| || || || ||||| ||| |||| || | | || || |||
Sbjct 42891 CCTCCGGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTTTACTTTACGGAAAC 42832
Query 157853 AACATCATCTCTGGTGCAGTTGTTCCTAGTTCAAACGCAATCGGTCTCCACTTCTACCCC 157912
|| || || ||| |||| || | |||| || || || ||| | ||||| |||||
Sbjct 42831 AATATTATTTCTAGTGCCATTATCCCTACTTTTGCAGCTATAGGTTTGCACTTTTACCCA 42772
Query 157913 ATCTGGGAAGCAGCATCTCTTGACGAGTGGCTGTATAACGGTGGTCCTTTCCAACTTGTA 157972
|| ||| ||||||| || |||| || ||| | || ||||||||||||| | || |
Sbjct 42771 ATATGGAAAGCAGCTTCCGTTGATGAATGGTTATACAACGGTGGTCCTTATGAGCTAATT 42712
Query 157973 GTATTCCACTTCCTGATCGGCATCTATGCCTATATGGGACGTGAGTGGGAACTCTCTTAC 158032
|| | |||||| | | || | | ||||||||| |||||||||||||| || |
Sbjct 42711 GTTCTACACTTCTTACTTGGTGTAGCTTACTATATGGGTCGTGAGTGGGAACTTATTTTC 42652
Query 158033 CGTTTAGGTATGCGCCCATGGATCTGTGTAGCAT 158066
||| | ||||||||||| ||||| ||| ||||
Sbjct 42651 CGTCTGGGTATGCGCCCTTGGATTGCTGTTGCAT 42618
>seq63634
Length=978
Score = 161 bits (178), Expect = 1e-34
Identities = 272/386 (70%), Gaps = 7/386 (2%)
Strand=Plus/Plus
Query 157685 TGGGTAACCTCAACCAACAACCGTTTGTATGTTGGTTGGTTCGGTGTACTGATGATTCCT 157744
||| ||||| || | |||||| | || |||| ||||| ||||| ||||||| |||
Sbjct 224 TGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCT 283
Query 157745 ACGTTGCTTGCTGCAACTATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCCCCCTGTGGA 157803
|| || | | |||| | ||||| || || | || ||| | ||||| || || || |
Sbjct 284 ACTTTATTGACCGCAATT-TCTGTATTTATTATTGCTTTCATTGCTGCACCTCCGGTACA 342
Query 157804 CATTGACGGCATCCGCGAACCAGTTGCTGGTTCACTCATGTATGGTAACAAC-ATCATCT 157862
||||| || || || ||||| ||| |||| || | | || || ||||| || || |
Sbjct 343 TATTGATGGTATTCGTGAACCTGTTTCTGGATCTTTACTTTAGGGAAACAAATATTATTT 402
Query 157863 CTGGTGCAGTTGTTCCTAGTTCAAACGCAATCGGTCTCCACTTCTACCCCATCTGGGAAG 157922
||||||| || | |||| ||| || || ||| | ||||| ||||| || |||||||
Sbjct 403 CTGGTGCCATTATCCCTACTTCTGCAGCTATAGGTTTGCACTTTTACCCAATATGGGAAG 462
Query 157923 CAGCATCTCTTGACGAGTGGCTGTATAACGGTGGTCCTTTCCAACTTGTAGTATTCCACT 157982
| || || | || || || | || ||||||||||||| | || | || | ||||
Sbjct 463 CGGCTTCCGTCGATGAATGATTATACAACGGTGGTCCTTGTGAGCTAATTGTTCTACACT 522
Query 157983 TCCTGATCGG--CATCTATGCCTATATGGGACGTGAGTGGGAACTCTCTTACCGTTTAGG 158040
|| | | || || || ||| |||||||| |||||||||||||| || |||| | ||
Sbjct 523 TCTTACTTGGTGCAGCT-TGC-TATATGGGTCGTGAGTGGGAACTTAATTTCCGTCTGGG 580
Query 158041 TATGCGCCCATGGATCTGTGTAGCAT 158066
||||||||| ||||| ||| ||||
Sbjct 581 TATGCGCCCTTGGATTGCTGTTGCAT 606
>seq105467
Length=471
Score = 125 bits (138), Expect = 8e-24
Identities = 173/240 (72%), Gaps = 8/240 (3%)
Strand=Plus/Plus
Query 158434 TTCCTTGCACTTCTTCCTTGCTGCATGGCCTGTTGTCGGCATCTGGTTCACCGCCCTTGG 158493
||| || ||||||||| | ||||| |||||||| || || |||| ||||||||| | ||
Sbjct 3 TTCTTTACACTTCTTCTTAGCTGCTTGGCCTGTAGTAGGTATCTAGTTCACCGCTTTAGG 62
Query 158494 CGTGTCA--ACCATGGCATTCAACCTGAACGGTTTCAACTTCAACCAGTCCATCCTTGAT 158551
| ||| || ||| | |||||| | || || || || |||| || || | |||||
Sbjct 63 --TATCAGCACTATGACTTTCAACTTAAATGGATTTAATGTCAATCAATCTGTAGTTGAT 120
Query 158552 GGTCAGGGTCGTGTGTTGAAC----ACCTGGGCAGATGTACTGAACCGCGCTGGTCTTGG 158607
|| | ||| |||| | || || ||| | ||| | | ||||||||| |||||
Sbjct 121 AGTTAAGGTTGTGTAATTAATTAATACTTGGTCTGATATTATTAACCGCGCTAACCTTGG 180
Query 158608 TATGGAAGTTATGCATGAGCGTAACGCACACAACTTCCCACTGGATCTTGCTGCTGCTGA 158667
|||||||||| ||||||| ||||| || || || ||||| || | || ||||||| |||
Sbjct 181 TATGGAAGTTCTGCATGAACGTAATGCTCATAATTTCCCTCTAAACCTAGCTGCTGTTGA 240
>seq136643
Length=350
Score = 118 bits (130), Expect = 1e-21
Identities = 160/221 (72%), Gaps = 8/221 (4%)
Strand=Plus/Minus
Query 158453 GCTGCATGGCCTGTTGTCGGCATCTGGTTCACCGCCCTTGGCGTGTCA--ACCATGGCAT 158510
||||| |||||||| || || |||| ||||||| | | || | ||| || ||||| |
Sbjct 350 GCTGCTTGGCCTGTAGTAGGTATCTAGTTCACCACTTTAGG--TATCAGCACTATGGCTT 293
Query 158511 TCAACCTGAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGA 158570
||||| | || || || || |||| || || | ||||| |||| |||||||| | |
Sbjct 292 TCAACTTAAATGGATTTAATTTCAGTCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTA 233
Query 158571 AC----ACCTGGGCAGATGTACTGAACCGCGCTGGTCTTGGTATGGAAGTTATGCATGAG 158626
| || ||||| ||| | | ||| |||||| ||||||||||||||| |||| ||
Sbjct 232 ATTAATACTTGGGCTGATATTATTAACTGCGCTGACCTTGGTATGGAAGTTCTGCAAGAA 173
Query 158627 CGTAACGCACACAACTTCCCACTGGATCTTGCTGCTGCTGA 158667
||||| || || || ||||| || || || ||| ||| |||
Sbjct 172 CGTAATGCTCATAATTTCCCTCTAGACCTAGCTACTGTTGA 132
>seq7201
Length=21985
Score = 109 bits (120), Expect = 6e-19
Identities = 111/144 (77%), Gaps = 2/144 (1%)
Strand=Plus/Minus
Query 158524 TTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAACACCTGGGCAGA 158583
|| ||| |||| || || | |||||| |||| |||||||| | ||| ||||| ||
Sbjct 1558 TTACAATATCAATCAATCTGTACTTGATAGTCAAGGTCGTGTAATTAACT--TGGGCTGA 1501
Query 158584 TGTACTGAACCGCGCTGGTCTTGGTATGGAAGTTATGCATGAGCGTAACGCACACAACTT 158643
| | ||||||||||| ||||||||||||||||||||||| ||||| || || || ||
Sbjct 1500 TATTATGAACCGCGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAATTT 1441
Query 158644 CCCACTGGATCTTGCTGCTGCTGA 158667
||| || || || ||||||| |||
Sbjct 1440 CCCTCTAGACCTAGCTGCTGTTGA 1417
>seq31866
Length=2350
Score = 98.7 bits (108), Expect = 1e-15
Identities = 123/169 (73%), Gaps = 0/169 (0%)
Strand=Plus/Plus
Query 157793 CCCCCTGTGGACATTGACGGCATCCGCGAACCAGTTGCTGGTTCACTCATGTATGGTAAC 157852
|| || || || ||||| || || || ||||| ||| |||| || | | || || |||
Sbjct 1810 CCTCCGGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTTTACTTTACGGAAAC 1869
Query 157853 AACATCATCTCTGGTGCAGTTGTTCCTAGTTCAAACGCAATCGGTCTCCACTTCTACCCC 157912
|| || || |||||||| || | |||| ||| || || ||| | ||||| |||||
Sbjct 1870 AATATTATTTCTGGTGCCATTATCCCTACTTCTGCAGCTATAGGTTTGCACTTTTACCCA 1929
Query 157913 ATCTGGGAAGCAGCATCTCTTGACGAGTGGCTGTATAACGGTGGTCCTT 157961
|| |||||||| || || |||| || ||| | || |||||||||||||
Sbjct 1930 ATATGGGAAGCGGCTTCCGTTGATGAATGGTTATACAACGGTGGTCCTT 1978
>seq12847
Length=11192
Score = 96.9 bits (106), Expect = 4e-15
Identities = 120/162 (74%), Gaps = 2/162 (1%)
Strand=Plus/Minus
Query 159609 ACTTTGGGGTCCTGAGTCTCAAGGCGACTTCCAACGCTGGTGCCAACTTGGAGGGATTTG 159668
||| ||||||||||| | ||||| || || || ||||| ||| | || | | ||
Sbjct 5900 ACTATGGGGTCCTGAAGCACAAGGGGATTTTACTCGTTGGTGTCAATTAGGCAGTCTGTG 5841
Query 159669 GTCCTTTGTTGCTCTCCACGGTGCATTCGCTCTCATAGGTTTTATGCTACGGCAATTTGA 159728
| | ||||| ||||| || ||||| |||| || |||||||| ||| |||| ||||||||
Sbjct 5840 GACTTTTGTCGCTCTACATGGTGCTTTCGGACTAATAGGTTTCATGTTACGTCAATTTGA 5781
Query 159729 AATTGCTCG-TCTAGTTGGTATCCGTCCTTACAATGCTATTG 159769
| ||||||| ||| ||| | || ||||| ||||| ||||
Sbjct 5780 ACTTGCTCGATCT-GTTCAATTGCGACCTTATAATGCAATTG 5740
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570818774438400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |