Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rosa_20x_20damascena_20[genbank_20GCA_5F001662545.1_202016-06-13] 307,872 sequences; 711,719,955 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq12296 96.9 5e-15 >seq12296 Length=11864 Score = 96.9 bits (106), Expect = 5e-15 Identities = 126/172 (73%), Gaps = 2/172 (1%) Strand=Plus/Minus Query 77897 CTCTCTTTCATATTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCC 77956 |||||||||||| ||||| || || | | ||||| || ||||| ||| |||| || Sbjct 7786 CTCTCTTTCATAATGAGTGTACAGTTGCTAAAATTTTTCACCCCAGCAATCTGCCAAACC 7727 Query 77957 AGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTT-AACTCGTTTCATAA 78015 || | ||||| || || | |||||||| || |||| | | || ||||| |||||| | Sbjct 7726 TGGAGACTCATTAGGACAAAATAATGACCAATCTCCAT-TACTTTAAACTCTTTTCATGA 7668 Query 78016 AGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTC 78067 | |||||||| | ||| |||||| ||| ||||| || | ||| | ||||| Sbjct 7667 ACAGATCAGGCACCCAAAGAGCATAAAAAAGATCACGAGCTCTGTTCTCTTC 7616 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 691995436590080