Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rosa_20x_20damascena_20[genbank_20GCA_5F001662545.1_202016-06-13]
307,872 sequences; 711,719,955 total letters
Query= NC_031944.1
Length=185102
Score E
Sequences producing significant alignments: (Bits) Value
seq5638 385 6e-102
seq11001 372 4e-98
seq251 363 2e-95
seq902 206 3e-48
seq11993 205 1e-47
seq2785 201 1e-46
seq3141 187 3e-42
seq3447 183 4e-41
seq63634 176 5e-39
seq136643 129 7e-25
seq105467 127 2e-24
seq7201 95.1 1e-14
seq31866 93.3 5e-14
seq50625 86.0 7e-12
>seq5638
Length=27578
Score = 385 bits (426), Expect = 6e-102
Identities = 641/918 (70%), Gaps = 15/918 (2%)
Strand=Plus/Minus
Query 169355 TGTAACTGGGTAACCTCCACTGACAACCGTCTGTATGTCGGTTGGTTCGGCGTCCTGATG 169414
||||| ||| ||||| ||||| ||| ||| || | || || || || || |||||
Sbjct 22449 TGTAATTGGATAACCAGAACTGA-AACTATCTTTACATTGGATGATTTGGTGTTTTGATG 22391
Query 169415 ATCCCCTGCCTGCTGGCAGCAACCACTTGTTTCATCATCGCCTTCATCGGTGCTCCCCCT 169474
||||| | || | ||||| || || || || || ||||| | ||| | |
Sbjct 22390 ATCCCTACTTTATTGACCGCAACTTCTGTATTTATTATTGCTTTCATTGCTGCACTTTCG 22331
Query 169475 GTGGACATCGACGGCATCCGCGAACCCGTTGCTGGTTCTCTGATGTATGGTAACAACATC 169534
|| || || || || || |||||||| ||| || | ||| | | || || ||||| ||
Sbjct 22330 GTAGATATTGATGGTATTCGCGAACCTGTTTCTTGATCTTTACTTTACGGAAACAATATT 22271
Query 169535 ATCTCTGGTGCTGTTGTGCCCTCTTCCAACGCA---ATCGGTCTTCACTTCTATCCCATC 169591
|| |||||||| ||| | || |||| ||| || ||| | ||||| || || ||
Sbjct 22270 ATTTCTGGTGCCGTTATCCCTACTTCT---GCATATATAGGTTTGCACTTTTACCCAATA 22214
Query 169592 TGGGAAGCAGCAAGTCTCGATGAATGGTTGTACAACGGTGGTCCTTTCCAACTGGTTGTC 169651
||||||| || | ||||||| || ||||| |||||||||| | || ||||
Sbjct 22213 TGGGAAGTGGCTTCCGTTGATGAATAATTATACAATGGTGGTCCTTATGAGCTAATTGTT 22154
Query 169652 TTCCACTTCCTCATCG--GCATCTATGCTTACATGGGTCGTGAGTGGGAATTGTCCTATC 169709
| |||||| | | | | | || |||| | ||||||||||||||| || | | ||
Sbjct 22153 CTACACTTCATACTTGTTGTAGCT-TGCT-ATATGGGTCGTGAGTGGAAACTTAGTTTTC 22096
Query 169710 GTCTGGGTATGCGCCCTTGGATCTGTGTTGCTTACTCTGCTCCCGTTGCGGCAGCCTCCG 169769
||||||| |||||||||||| |||||| || || ||||| ||||| || | | |
Sbjct 22095 GTCTGGG---GCGCCCTTGGATTGTTGTTGCATATTCAGCTCCTGTTGCAGCTGTTACTG 22039
Query 169770 CTGTTTTCCTGGTCTACCCGTTTGGGCAAGGGTCGTTCTCTGACGCTATGCCTCTGGGTA 169829
|||||||| || ||||||| |||| ||||| || ||||||| |||||| | || |
Sbjct 22038 CTGTTTTCTTGATCTACCCAATTGGTCAAGGAAGCTTTTCTGACGGTATGCCGCGAGGAA 21979
Query 169830 TCTCGGGAACCTTTAACTACATGCTGGTCTTCCAAGCTGAGCACAACATCCTCATGCACC 169889
|||| || || || |||| |||| | || ||||||||||||||||||||||| |||||||
Sbjct 21978 TCTCTGGTACTTTCAACTTCATGATTGTATTCCAAGCTGAGCACAACATCCTTATGCACC 21919
Query 169890 CCTTCCACATGCTTGGTGTTGCGGGAGTGTTTGGTGGGTCTCTGTTTAGCGCGATGCACG 169949
| || |||||||| ||||| | || || || | || || || || || || ||||| |
Sbjct 21918 CATTTCACATGCTAGGTGTGGTTGGTGTATTCGACGGCTCCCTATTCAGTGCTATGCAAG 21859
Query 169950 GTAGCCTCGTCACTTCGAGTCTTGTCCGTGAAACCACCGAGAACGAGTCCCAGAACTATG 170009
|| | || | || ||| | || | |||||||| || || | | || | |
Sbjct 21858 GTTCTTTGGTAATCTCTAGTTTGATCAGGGAAACCACAGAAAATGTATTTGCTAATGAAG 21799
Query 170010 GTTACAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCCGCTCACGGTTACTTCG 170069
|||||| |||| |||||| ||||| || || || ||||| ||||| ||||| || |
Sbjct 21798 GTTACAGATTCGATCAAGAGGAAGAAACTTATAATATCGTACTAGCTCATGGTTATTTTG 21739
Query 170070 GTCGCCTGATCTTCCAATACGCTTCCTTCAACAACTCCCGTTCACTGCACTTCTTCCTCG 170129
| || ||||||||||||| ||| |||||||| || ||||| | ||||||||| | |
Sbjct 21738 GCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACACTTCTTCTTAG 21679
Query 170130 CAGCATGGCCTGTTGTTGGCATCTGGTTCACCGCTCTTGGTGTCTCCACGATGGCGTTCA 170189
| || |||||||| || || |||| |||||||||| | || | ||| ||| | ||||
Sbjct 21678 CTGCTTGGCCTGTAGTAGGTATCTAGTTCACCGCTTTAAGTATTAGCACTATGACTTTCA 21619
Query 170190 ACCTGAACGGTTTCAACTTCAACCAGTCCATCATCGATGGTCAGGGTCGTGTGCTCAACA 170249
|| | || || || || ||||| || | | | || |||| ||||||| | || |
Sbjct 21618 ACTTAAATGGATTTAATTTCAATCAAGCTGTATTTGAGAGTCA-AGTCGTGTAATTAATA 21560
Query 170250 CCTGGGCAGACGTTCTCA 170267
| ||||| || || |||
Sbjct 21559 CTTGGGCTGATATTGTCA 21542
>seq11001
Length=13740
Score = 372 bits (412), Expect = 4e-98
Identities = 406/539 (75%), Gaps = 0/539 (0%)
Strand=Plus/Minus
Query 169679 TACATGGGTCGTGAGTGGGAATTGTCCTATCGTCTGGGTATGCGCCCTTGGATCTGTGTT 169738
|| |||||| ||||||||||| | | ||||||||||||||||||||||| |||
Sbjct 5826 TATATGGGTTGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGATTGCGGTT 5767
Query 169739 GCTTACTCTGCTCCCGTTGCGGCAGCCTCCGCTGTTTTCCTGGTCTACCCGTTTGGGCAA 169798
|| || || ||||| ||||| || || | ||||||||| || ||||||| |||| |||
Sbjct 5766 GCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATCTACCCAATTGGTCAA 5707
Query 169799 GGGTCGTTCTCTGACGCTATGCCTCTGGGTATCTCGGGAACCTTTAACTACATGCTGGTC 169858
|| || ||||||| ||||||||| || ||||| || || || |||| |||| | ||
Sbjct 5706 GGAAGCTTTTCTGACGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATGATTGTA 5647
Query 169859 TTCCAAGCTGAGCACAACATCCTCATGCACCCCTTCCACATGCTTGGTGTTGCGGGAGTG 169918
||||||||||||||||||||||| |||||||| || |||||||| ||||| || || ||
Sbjct 5646 TTCCAAGCTGAGCACAACATCCTTATGCACCCATTTCACATGCTAGGTGTGGCTGGTGTA 5587
Query 169919 TTTGGTGGGTCTCTGTTTAGCGCGATGCACGGTAGCCTCGTCACTTCGAGTCTTGTCCGT 169978
|| || || || || || || || ||||| ||| | || || || ||| | | |
Sbjct 5586 TTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCTTTGGTAACCTCTAGTTTGATTAGG 5527
Query 169979 GAAACCACCGAGAACGAGTCCCAGAACTATGGTTACAAGTTCGGTCAAGAAGAAGAGACC 170038
|||||||| || || || || || | |||||| |||||| |||| ||||| ||
Sbjct 5526 GAAACCACAGAAAATGAATCTGCTAATGAAAGTTACAGATTCGGTGAAGAGGAAGAAACT 5467
Query 170039 TACAACATCGTTGCCGCTCACGGTTACTTCGGTCGCCTGATCTTCCAATACGCTTCCTTC 170098
|| || ||||| |||||||| ||||| || || || ||||||||||||| ||| |||
Sbjct 5466 TATAATATCGTAGCCGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTC 5407
Query 170099 AACAACTCCCGTTCACTGCACTTCTTCCTCGCAGCATGGCCTGTTGTTGGCATCTGGTTC 170158
||||| || ||||| | ||||||||| | || || |||||||| || || |||||||||
Sbjct 5406 AACAATTCTCGTTCTTTACACTTCTTCTTAGCTGCTTGGCCTGTAGTAGGTATCTGGTTC 5347
Query 170159 ACCGCTCTTGGTGTCTCCACGATGGCGTTCAACCTGAACGGTTTCAACTTCAACCAGTC 170217
|||||| | ||| | ||| ||||| |||||| | || || || || ||||| || ||
Sbjct 5346 ACCGCTTTAGGTATAAGCACTATGGCTTTCAACTTAAATGGATTTAATTTCAATCAATC 5288
>seq251
Length=151924
Score = 363 bits (402), Expect = 2e-95
Identities = 432/586 (74%), Gaps = 0/586 (0%)
Strand=Plus/Minus
Query 171027 ATCTATCCTCTTGGGCAGTCAAGTTGGTTCTTCGCACCTTCCTTTGGAGTTGCAGCAATC 171086
|| ||||| | || |||||| |||||||||| || || ||||| || ||||| ||
Sbjct 52481 ATTTATCCGGTAGGTCAGTCAGGTTGGTTCTTTGCGCCCAATTTTGGTGTAGCAGCTATA 52422
Query 171087 TTCCGCTTCCTGCTCTTCCTGCAAGGTTTCCACAACTGGACACTGAATCCATTTCATATG 171146
|| || ||| | ||||| | ||||| || || || |||||| |||| ||||||||||||
Sbjct 52421 TTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATTGAACCCATTTCATATG 52362
Query 171147 ATGGGTGTTGCAGGTATCCTCGGCGGTGCATTGCTTTCTGCAATTCATGGTGTTACAGTA 171206
||||| ||||| || | | |||| | | || | | | |||||||||| ||| |||
Sbjct 52361 ATGGGAGTTGCGGGGGTGTTGGGCGCTTCTCTGTTATGCGTTATTCATGGTGCTACCGTA 52302
Query 171207 GAGAATACTTTGTATGAAGATGGTGATCAAGCAAACACCTTTAAGGCATTTGACACGACT 171266
|| |||||||| | ||||||||||||| ||||| || || || ||| || | |||
Sbjct 52301 GAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGCTTTTAACCCAACT 52242
Query 171267 CAGGAGGAAGAGACATATTCTATGGTCACTGCTAATCGTTTCTGGTCGCAGATTTTTGGT 171326
|| | ||||| || ||||| |||||||| ||||| || || ||||| || || |||||
Sbjct 52241 CAAGCTGAAGAAACTTATTCCATGGTCACCGCTAACCGCTTTTGGTCCCAAATCTTTGGG 52182
Query 171327 ATCGCGTTCAGCAATAAGCGTTGGTTGCATTTCTTTATGCTGTTTGTTCCTGTCATGGGT 171386
| || || |||||| |||||||| |||||||||||| | ||||| || || | |||
Sbjct 52181 GTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACCGGT 52122
Query 171387 CTTTGGGTCAGTAGTCTGGGGATTATTGGTCTTGCTCTTAATCTTAGGGCTTATGATTTC 171446
| ||| | ||| ||| || | | ||||| || || || || | || ||||| |||
Sbjct 52121 TTATGGATGAGTGCTCTTGGAGTAGTCGGTCTGGCCCTGAACCTACGTGCCTATGACTTC 52062
Query 171447 GTAAGTCAGGAGGTCAGAGCAGCAGAAGATCCAGAGTTCGAGACGTTCTATACCAAGAAC 171506
|| |||||| || | ||||| |||||||| || || ||||| ||||| ||||| ||
Sbjct 52061 GTTTCTCAGGAAATCTGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACCAAAAAT 52002
Query 171507 ATCCTATTGAATGAAGGTCTTCGTGCATGGATGGCACCAGTAGACCAACCACATGAAAAC 171566
|| || || || |||||| ||||||| ||||||| | ||| || || |||||||||
Sbjct 52001 ATTCTCTTAAACGAAGGTATTCGTGCTTGGATGGGGGCTCAAGATCAGCCTCATGAAAAC 51942
Query 171567 TTTGTGTTCCCAGAGGAAGTTCTACCTCGTGGCAATGCACTTTGAT 171612
|| | ||||| ||||| |||||||| ||||| || || |||| ||
Sbjct 51941 CTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCTTTAAT 51896
>seq902
Length=93126
Score = 206 bits (228), Expect = 3e-48
Identities = 196/251 (78%), Gaps = 6/251 (2%)
Strand=Plus/Minus
Query 169679 TACATGGGTCGTGAGTGGGAATTGTCCTATCGTCTGGGTATGCGCCCTTGGATCTGTGTT 169738
||||||||||||||||||||| | | ||||||||||||||||||||||| ||||
Sbjct 1491 TACATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGATTGCTGTT 1432
Query 169739 GCTTACTCTGCTCCCGTTGCGGCAGCCTCCGCTGTTTTCCTGGTCTACCCGTTTGGGCAA 169798
|| || || ||||| ||||| || || ||||||| || ||||||| |||| |||
Sbjct 1431 GCATATTCAGCTCCTGTTGCAGCTGC------TGTTTTCTTGATCTACCCAATTGGTCAA 1378
Query 169799 GGGTCGTTCTCTGACGCTATGCCTCTGGGTATCTCGGGAACCTTTAACTACATGCTGGTC 169858
|| || ||||||| ||||||||| || |||| || || || |||| |||| | ||
Sbjct 1377 GGAAGCTTTTCTGACGATATGCCTCTAGGAATCTTTGGTACTTTCAACTTCATGATTGTA 1318
Query 169859 TTCCAAGCTGAGCACAACATCCTCATGCACCCCTTCCACATGCTTGGTGTTGCGGGAGTG 169918
||||||||||||||||||||||| |||||||| || |||||||| ||||| || || ||
Sbjct 1317 TTCCAAGCTGAGCACAACATCCTTATGCACCCATTTCACATGCTAGGTGTGGCTGGTGTA 1258
Query 169919 TTTGGTGGGTC 169929
|| || || ||
Sbjct 1257 TTCGGCGGCTC 1247
>seq11993
Length=12302
Score = 205 bits (226), Expect = 1e-47
Identities = 249/339 (73%), Gaps = 4/339 (1%)
Strand=Plus/Plus
Query 170009 GGTTACAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCCGCTCACGGTTACTTC 170068
||||||| ||||||||||| ||||| || || || || || ||| |||| ||||| ||
Sbjct 10375 GGTTACAGATTCGGTCAAGAGGAAGAAACTTATAATATTGTAGCCACTCATGGTTATTTT 10434
Query 170069 GGTCGCCTGATCTTCCAATACGCTTCCTTCAACAACTCCCGTTCACTGCACTTCTTCCTC 170128
|| | ||||||||||||| ||| |||||||| || | ||| | ||||||||| |
Sbjct 10435 GGCTGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCATTCTTTACACTTCTTCTTA 10494
Query 170129 GCAGCATGGCCTGTTGTTGGCATCTGGTTCACCGCTCTTGGTGTCTCCACGATGGCGTTC 170188
|| || |||||||| || || |||| ||||||| || | ||| || ||| ||| | |||
Sbjct 10495 GCTGCTTGGCCTGTAGTAGGTATCTAGTTCACCACTTTAGGTATCAGCACTATGACTTTC 10554
Query 170189 AACCTGAACGGTTTCAACTTCAACCAGTCCATCATCGATGGTCAGGGTCGTG----TGCT 170244
||| | || || || || |||| || || | | ||| |||| ||| ||| | |
Sbjct 10555 AACTTAAATGGATTTAATGTCAATCAATCTGTAGTTGATAGTCAAGGTTGTGTAATTAAT 10614
Query 170245 CAACACCTGGGCAGACGTTCTCAACCGTGCTGGTCTTGGCATGGAAGTGATGCACGAGCG 170304
|| || ||| | || || | ||||| ||| ||||| |||||||| |||| || ||
Sbjct 10615 TAATACTTGGTCTGATATTATTAACCGCGCTAACCTTGGTATGGAAGTTCTGCATGAACG 10674
Query 170305 TAATGCTCACAACTTCCCTCTCGACCTCGCTGCTGCTGA 170343
||||||||| || |||||||| ||||| ||||||| |||
Sbjct 10675 TAATGCTCATAATTTCCCTCTAGACCTAGCTGCTGTTGA 10713
>seq2785
Length=48819
Score = 201 bits (222), Expect = 1e-46
Identities = 248/339 (73%), Gaps = 4/339 (1%)
Strand=Plus/Minus
Query 170009 GGTTACAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCCGCTCACGGTTACTTC 170068
||||||| ||| ||||||| ||||| || || || || || |||||||| ||||| ||
Sbjct 2795 GGTTACAGATTCAGTCAAGAGGAAGAAACTTATAATATTGTAGCCGCTCATGGTTATTTT 2736
Query 170069 GGTCGCCTGATCTTCCAATACGCTTCCTTCAACAACTCCCGTTCACTGCACTTCTTCCTC 170128
|| | ||||||||||||| ||| |||||||| || | ||| | ||||||||| |
Sbjct 2735 GGCTGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCATTCTTTACACTTCTTCTTA 2676
Query 170129 GCAGCATGGCCTGTTGTTGGCATCTGGTTCACCGCTCTTGGTGTCTCCACGATGGCGTTC 170188
|| || |||||||| || || |||| |||||||||| | ||| || ||| ||| | |||
Sbjct 2675 GCTGCTTGGCCTGTAGTAGGTATCTAGTTCACCGCTTTAGGTATCAGCACTATGACTTTC 2616
Query 170189 AACCTGAACGGTTTCAACTTCAACCAGTCCATCATCGATGGTCAGGGTCGTG----TGCT 170244
||| | || || || || |||| || || | | ||| || | ||| ||| | |
Sbjct 2615 AACTTAAATGGATTTAATGTCAATCAATCTGTAGTTGATAGTTAAGGTTGTGTAATTAAT 2556
Query 170245 CAACACCTGGGCAGACGTTCTCAACCGTGCTGGTCTTGGCATGGAAGTGATGCACGAGCG 170304
|| || ||| | || || | ||||| ||| ||||| |||||||| |||| || ||
Sbjct 2555 TAATACTTGGTCTGATATTATTAACCGCGCTAACCTTGGTATGGAAGTTCTGCATGAACG 2496
Query 170305 TAATGCTCACAACTTCCCTCTCGACCTCGCTGCTGCTGA 170343
||||||||| || |||||||| |||| ||||||| |||
Sbjct 2495 TAATGCTCATAATTTCCCTCTAAACCTAGCTGCTGTTGA 2457
>seq3141
Length=44585
Score = 187 bits (206), Expect = 3e-42
Identities = 286/403 (71%), Gaps = 10/403 (2%)
Strand=Plus/Minus
Query 169343 TGGGAACAATTCTGTAACTGGGTAACCTCCACTGACAACCGTCTGTATGTCGGTTGGTTC 169402
|||| || || ||||| ||| ||||| |||||| |||||||| || | || |||||
Sbjct 43017 TGGGGTCACTTTTGTAATTGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTT 42958
Query 169403 GGCGTCCTGATGATCCCCTGCCTGCTGGCAGCAACCACTTGTTTCATCATCGCCTTCATC 169462
|| || |||||||||| | || | ||||| || || || || || |||||
Sbjct 42957 GGTGTTTTGATGATCCCTACTTTATTGACTGCAACATCTGTATTTATTATTGCTTTCATT 42898
Query 169463 GGTGCTCCCCCTGTGGACATCGACGGCATCCGCGAACCCGTTGCTGGTTCTCTGATGTAT 169522
| ||| || || || || || || || || || ||||| ||| |||| ||| | | ||
Sbjct 42897 GCTGCACCTCCGGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTTTACTTTAC 42838
Query 169523 GGTAACAACATCATCTCTGGTGCTGTTGTGCC--CTCTTCCAACGCAATCGGTCTTCACT 169580
|| ||||| || || ||| |||| || | || || || || || || ||| | ||||
Sbjct 42837 GGAAACAATATTATTTCTAGTGCCATTATCCCTACTTTTGCA--GCTATAGGTTTGCACT 42780
Query 169581 TCTATCCCATCTGGGAAGCAGCAAGTCTCGATGAATGGTTGTACAACGGTGGTCCTTTCC 169640
| || || || ||| ||||||| | ||||||||||| ||||||||||||||||
Sbjct 42779 TTTACCCAATATGGAAAGCAGCTTCCGTTGATGAATGGTTATACAACGGTGGTCCTTATG 42720
Query 169641 AACTGGTTGTCTTCCACTTCCTCATCGGCATCTATGCTTAC---ATGGGTCGTGAGTGGG 169697
| || |||| | |||||| | | || | || |||||| ||||||||||||||||
Sbjct 42719 AGCTAATTGTTCTACACTTCTTACTTGG--TGTA-GCTTACTATATGGGTCGTGAGTGGG 42663
Query 169698 AATTGTCCTATCGTCTGGGTATGCGCCCTTGGATCTGTGTTGC 169740
|| | | ||||||||||||||||||||||| ||||||
Sbjct 42662 AACTTATTTTCCGTCTGGGTATGCGCCCTTGGATTGCTGTTGC 42620
>seq3447
Length=41424
Score = 183 bits (202), Expect = 4e-41
Identities = 208/279 (75%), Gaps = 0/279 (0%)
Strand=Plus/Plus
Query 169717 TATGCGCCCTTGGATCTGTGTTGCTTACTCTGCTCCCGTTGCGGCAGCCTCCGCTGTTTT 169776
|||| |||||||||| |||||| || || ||||| |||| || | | | | ||||
Sbjct 13299 TATGTGCCCTTGGATTGCTGTTGCATATTCAGCTCCTATTGCAGCTACTACTGTTATTTT 13358
Query 169777 CCTGGTCTACCCGTTTGGGCAAGGGTCGTTCTCTGACGCTATGCCTCTGGGTATCTCGGG 169836
| || ||||||| |||| ||||| || ||||||| ||||||||| || ||||| ||
Sbjct 13359 CTTGATCTACCCAATTGGTCAAGGAAGCTTTTCTGACGGTATGCCTCTAGGAATCTCTGG 13418
Query 169837 AACCTTTAACTACATGCTGGTCTTCCAAGCTGAGCACAACATCCTCATGCACCCCTTCCA 169896
|| || |||| |||| | || ||||||||||||||||||||||| |||||||| || ||
Sbjct 13419 TACTTTCAACTTCATGATTGTATTCCAAGCTGAGCACAACATCCTTATGCACCCATTTCA 13478
Query 169897 CATGCTTGGTGTTGCGGGAGTGTTTGGTGGGTCTCTGTTTAGCGCGATGCACGGTAGCCT 169956
|||||| ||||| || || || || || || || || || || || ||||| ||| |
Sbjct 13479 CATGCTAGGTGTGGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCTTT 13538
Query 169957 CGTCACTTCGAGTCTTGTCCGTGAAACCACCGAGAACGA 169995
|| || || ||| | || | |||||||| || || ||
Sbjct 13539 GGTAACCTCTAGTTTGATCAGGGAAACCACAGAAAATGA 13577
>seq63634
Length=978
Score = 176 bits (194), Expect = 5e-39
Identities = 277/392 (71%), Gaps = 5/392 (1%)
Strand=Plus/Plus
Query 169352 TTCTGTAACTGGGTAACCTCCACTGACAACCGTCTGTATGTCGGTTGGTTCGGCGTCCTG 169411
|| ||||| ||| ||||| |||||| |||||||| || | || ||||| || || ||
Sbjct 215 TTTTGTAATTGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 274
Query 169412 ATGATCCCCTGCCTGCTGGCAGCAACCACTTGTTTCATCATCGCCTTCATCGGTGCTCCC 169471
|||||||| | || | |||| || || || || || ||||| | ||| ||
Sbjct 275 ATGATCCCTACTTTATTGACCGCAATTTCTGTATTTATTATTGCTTTCATTGCTGCACCT 334
Query 169472 CCTGTGGACATCGACGGCATCCGCGAACCCGTTGCTGGTTCTCTGATGTATGGTAACAAC 169531
|| || | || || || || || ||||| ||| |||| ||| | | || || |||||
Sbjct 335 CCGGTACATATTGATGGTATTCGTGAACCTGTTTCTGGATCTTTACTTTAGGGAAACAAA 394
Query 169532 -ATCATCTCTGGTGCTGTTGTGCCCTCTTCCAACGCAATCGGTCTTCACTTCTATCCCAT 169590
|| || |||||||| || | || |||| || || ||| | ||||| || || ||
Sbjct 395 TATTATTTCTGGTGCCATTATCCCTACTTCTGCAGCTATAGGTTTGCACTTTTACCCAAT 454
Query 169591 CTGGGAAGCAGCAAGTCTCGATGAATGGTTGTACAACGGTGGTCCTTTCCAACTGGTTGT 169650
|||||||| || |||||||||| || |||||||||||||||| | || ||||
Sbjct 455 ATGGGAAGCGGCTTCCGTCGATGAATGATTATACAACGGTGGTCCTTGTGAGCTAATTGT 514
Query 169651 CTTCCACTTCCTCATCG--GCATCTATGCTTACATGGGTCGTGAGTGGGAATTGTCCTAT 169708
| |||||| | | | ||| || ||| || |||||||||||||||||| | |
Sbjct 515 TCTACACTTCTTACTTGGTGCAGCT-TGC-TATATGGGTCGTGAGTGGGAACTTAATTTC 572
Query 169709 CGTCTGGGTATGCGCCCTTGGATCTGTGTTGC 169740
||||||||||||||||||||||| ||||||
Sbjct 573 CGTCTGGGTATGCGCCCTTGGATTGCTGTTGC 604
>seq136643
Length=350
Score = 129 bits (142), Expect = 7e-25
Identities = 160/219 (73%), Gaps = 4/219 (2%)
Strand=Plus/Minus
Query 170129 GCAGCATGGCCTGTTGTTGGCATCTGGTTCACCGCTCTTGGTGTCTCCACGATGGCGTTC 170188
|| || |||||||| || || |||| ||||||| || | ||| || ||| ||||| |||
Sbjct 350 GCTGCTTGGCCTGTAGTAGGTATCTAGTTCACCACTTTAGGTATCAGCACTATGGCTTTC 291
Query 170189 AACCTGAACGGTTTCAACTTCAACCAGTCCATCATCGATGGTCAGGGTCGTGTGCTCAAC 170248
||| | || || || || |||| || || | | ||| |||| |||||||| | ||
Sbjct 290 AACTTAAATGGATTTAATTTCAGTCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAAT 231
Query 170249 ----ACCTGGGCAGACGTTCTCAACCGTGCTGGTCTTGGCATGGAAGTGATGCACGAGCG 170304
|| ||||| || || | ||| | |||| ||||| |||||||| |||| || ||
Sbjct 230 TAATACTTGGGCTGATATTATTAACTGCGCTGACCTTGGTATGGAAGTTCTGCAAGAACG 171
Query 170305 TAATGCTCACAACTTCCCTCTCGACCTCGCTGCTGCTGA 170343
||||||||| || |||||||| ||||| ||| ||| |||
Sbjct 170 TAATGCTCATAATTTCCCTCTAGACCTAGCTACTGTTGA 132
>seq105467
Length=471
Score = 127 bits (140), Expect = 2e-24
Identities = 167/231 (72%), Gaps = 4/231 (2%)
Strand=Plus/Plus
Query 170117 CACTTCTTCCTCGCAGCATGGCCTGTTGTTGGCATCTGGTTCACCGCTCTTGGTGTCTCC 170176
||||||||| | || || |||||||| || || |||| |||||||||| | ||| || |
Sbjct 10 CACTTCTTCTTAGCTGCTTGGCCTGTAGTAGGTATCTAGTTCACCGCTTTAGGTATCAGC 69
Query 170177 ACGATGGCGTTCAACCTGAACGGTTTCAACTTCAACCAGTCCATCATCGATGGTCAGGGT 170236
|| ||| | |||||| | || || || || |||| || || | | ||| || | |||
Sbjct 70 ACTATGACTTTCAACTTAAATGGATTTAATGTCAATCAATCTGTAGTTGATAGTTAAGGT 129
Query 170237 CGTGTGCTCAAC----ACCTGGGCAGACGTTCTCAACCGTGCTGGTCTTGGCATGGAAGT 170292
|||| | || || ||| | || || | ||||| ||| ||||| ||||||||
Sbjct 130 TGTGTAATTAATTAATACTTGGTCTGATATTATTAACCGCGCTAACCTTGGTATGGAAGT 189
Query 170293 GATGCACGAGCGTAATGCTCACAACTTCCCTCTCGACCTCGCTGCTGCTGA 170343
|||| || ||||||||||| || |||||||| |||| ||||||| |||
Sbjct 190 TCTGCATGAACGTAATGCTCATAATTTCCCTCTAAACCTAGCTGCTGTTGA 240
>seq7201
Length=21985
Score = 95.1 bits (104), Expect = 1e-14
Identities = 93/119 (78%), Gaps = 2/119 (2%)
Strand=Plus/Minus
Query 170225 GATGGTCAGGGTCGTGTGCTCAACACCTGGGCAGACGTTCTCAACCGTGCTGGTCTTGGC 170284
||| |||| |||||||| | ||| ||||| || || | ||||| ||| |||||
Sbjct 1533 GATAGTCAAGGTCGTGTAATTAACT--TGGGCTGATATTATGAACCGCGCTAACCTTGGT 1476
Query 170285 ATGGAAGTGATGCACGAGCGTAATGCTCACAACTTCCCTCTCGACCTCGCTGCTGCTGA 170343
|||||||| ||||| || ||||||||||| || |||||||| ||||| ||||||| |||
Sbjct 1475 ATGGAAGTTATGCATGAACGTAATGCTCATAATTTCCCTCTAGACCTAGCTGCTGTTGA 1417
>seq31866
Length=2350
Score = 93.3 bits (102), Expect = 5e-14
Identities = 122/169 (72%), Gaps = 0/169 (0%)
Strand=Plus/Plus
Query 169469 CCCCCTGTGGACATCGACGGCATCCGCGAACCCGTTGCTGGTTCTCTGATGTATGGTAAC 169528
|| || || || || || || || || ||||| ||| |||| ||| | | || || |||
Sbjct 1810 CCTCCGGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTTTACTTTACGGAAAC 1869
Query 169529 AACATCATCTCTGGTGCTGTTGTGCCCTCTTCCAACGCAATCGGTCTTCACTTCTATCCC 169588
|| || || |||||||| || | || |||| || || ||| | ||||| || ||
Sbjct 1870 AATATTATTTCTGGTGCCATTATCCCTACTTCTGCAGCTATAGGTTTGCACTTTTACCCA 1929
Query 169589 ATCTGGGAAGCAGCAAGTCTCGATGAATGGTTGTACAACGGTGGTCCTT 169637
|| |||||||| || | ||||||||||| ||||||||||||||||
Sbjct 1930 ATATGGGAAGCGGCTTCCGTTGATGAATGGTTATACAACGGTGGTCCTT 1978
>seq50625
Length=1331
Score = 86.0 bits (94), Expect = 7e-12
Identities = 130/185 (70%), Gaps = 0/185 (0%)
Strand=Plus/Minus
Query 167439 GATGATCAATACATCCTTGACGCGGCTGAGGAAGCGGGTGTGGACATCAACTACTCGTGC 167498
|||||| ||||| || ||||| || ||||| || ||| | ||| || ||||| |||
Sbjct 1165 GATGATGTCTACATTCTCGACGCCGCCGAGGAGGCCGGTCTTGACCTCCCGTACTCTTGC 1106
Query 167499 CGTGCAGGCGCTTGTTCGTCGTGCGCGGGAAAACTCATCTCTGGCACCGTAGATCAAAGC 167558
|| || || |||| || || ||||| ||||| | | |||||| ||| |||||
Sbjct 1105 CGCGCCGGTTCTTGCTCTTCCTGCGCCGGAAAGGTTGTTGCTGGCAGCGTCGATCAGTCT 1046
Query 167559 GATCAATCCTTCCTGGACGATGATCAAATTGCCGAAGGTTTCCTTCTCACCTGTGTGTCC 167618
|| || ||||| || ||||| || || | || || || | ||||||||||| ||
Sbjct 1045 GACCAGAGTTTCCTTGATGATGAACAGATAGACGGTGGATTTGTCCTCACCTGTGTCGCC 986
Query 167619 TATCC 167623
|||||
Sbjct 985 TATCC 981
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589919383677440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |