Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ruellia_20speciosa_20[genbank_20GCA_5F001909325.1_202016-12-20] 794,288 sequences; 740,035,655 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq677466 104 2e-17 >seq677466 Length=8805 Score = 104 bits (114), Expect = 2e-17 Identities = 122/165 (74%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 14204 CACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAAT 14263 |||||||| ||||| || ||||||||||| || ||| | |||||||||||| || ||| Sbjct 7610 CACGCAAAGTCACAGTGGAGGCCCTCATCCCTGGAAATCAATTCGTTTGAAAAAGTCAAT 7669 Query 14264 CCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAAT 14323 || ||||||||||| || || || | ||| || || || ||| ||| || || || Sbjct 7670 CCAGGCATCAATCCACGCTTCTTCAGCCAGAAAATCGCGCAGAAGCTTCCAGAGAAAAAA 7729 Query 14324 ATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGAT 14368 || ||||| || |||||| || |||| || || |||| ||| Sbjct 7730 ATCCCCTCCACACAAGCAAAGGCGATTATCCGCTCAGCAAAGGAT 7774 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 477556583475840