Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ruellia_20speciosa_20[genbank_20GCA_5F001909325.1_202016-12-20] 794,288 sequences; 740,035,655 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq677466 98.7 9e-16 >seq677466 Length=8805 Score = 98.7 bits (108), Expect = 9e-16 Identities = 123/166 (74%), Gaps = 2/166 (1%) Strand=Plus/Plus Query 13872 CACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAAT 13931 |||||||| ||||| || ||||||||||| || ||| | |||||||||||| || ||| Sbjct 7610 CACGCAAAGTCACAGTGGAGGCCCTCATCCCTGGAAATCAATTCGTTTGAAAAAGTCAAT 7669 Query 13932 CCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCA-AATGACCCGGAAAAGAA 13990 || ||||||||||| || || || | ||| || || || ||| || || || || || Sbjct 7670 CCAGGCATCAATCCACGCTTCTTCAGCCAGAAAATCGC-GCAGAAGCTTCCAGAGAAAAA 7728 Query 13991 TATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGAT 14036 || ||||| || |||||| || |||| || || |||| ||| Sbjct 7729 AATCCCCTCCACACAAGCAAAGGCGATTATCCGCTCAGCAAAGGAT 7774 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 474964972579200